RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 CNBPP62633 177 aaKnown RBP10.82□□□□□ -0.68
CCDC90B-202ENST00000455220 SMIM6P0DI80 62 aa10.81□□□□□ -0.68
CCDC90B-202ENST00000455220 C2orf82Q6UX34 121 aa10.81□□□□□ -0.68
CCDC90B-202ENST00000455220 NDUFA1O15239 70 aa10.8□□□□□ -0.68
CCDC90B-202ENST00000455220 CKS1BP61024 79 aa10.8□□□□□ -0.68
CCDC90B-202ENST00000455220 ZNF625Q96I27 306 aaPredicted RBP10.8□□□□□ -0.68
CCDC90B-202ENST00000455220 CAMK2N2Q96S95 79 aa10.8□□□□□ -0.68
CCDC90B-202ENST00000455220 VAMP8Q9BV40 100 aa10.8□□□□□ -0.68
CCDC90B-202ENST00000455220 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.79□□□□□ -0.68
CCDC90B-202ENST00000455220 LGALS3P17931 250 aaKnown RBP10.79□□□□□ -0.68
CCDC90B-202ENST00000455220 SYCNQ0VAF6 134 aa10.79□□□□□ -0.68
CCDC90B-202ENST00000455220 SFTA2Q6UW10 78 aa10.79□□□□□ -0.68
CCDC90B-202ENST00000455220 NMUP48645 174 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 C10orf25Q5T742 122 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 UNQ6190/PRO20217Q6UXQ8 127 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 Q6ZRU5 148 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 PAM16Q9Y3D7 125 aa10.78□□□□□ -0.68
CCDC90B-202ENST00000455220 SPATA45Q537H7 98 aa10.77□□□□□ -0.69
CCDC90B-202ENST00000455220 CARD19Q96LW7 228 aa10.77□□□□□ -0.69
CCDC90B-202ENST00000455220 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 TRBV30A0A0K0K1B3 111 aa10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 MYMXA0A1B0GTQ4 84 aa10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 RNF151Q2KHN1 245 aa10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 TTTY13Q9BZ97 58 aa10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 C6orf48Q9UBA6 75 aa10.76□□□□□ -0.69
CCDC90B-202ENST00000455220 BIRC6Q9NR09 4857 aa10.75□□□□□ -0.69
CCDC90B-202ENST00000455220 A0A1B0GVY2 172 aa10.75□□□□□ -0.69
CCDC90B-202ENST00000455220 PCP2Q8IVA1 136 aa10.75□□□□□ -0.69
CCDC90B-202ENST00000455220 KRTAP10-2P60368 255 aa10.74□□□□□ -0.69
CCDC90B-202ENST00000455220 HERV-K104P63124 156 aa10.74□□□□□ -0.69
CCDC90B-202ENST00000455220 ZNF815PA8K554 130 aa10.73□□□□□ -0.69
CCDC90B-202ENST00000455220 PKHD1P08F94 4074 aa10.73□□□□□ -0.69
CCDC90B-202ENST00000455220 S100A12P80511 92 aa10.73□□□□□ -0.69
CCDC90B-202ENST00000455220 C9orf163Q8N9P6 203 aa10.73□□□□□ -0.69
CCDC90B-202ENST00000455220 PGPEP1Q9NXJ5 209 aa10.73□□□□□ -0.69
CCDC90B-202ENST00000455220 DYNC1H1Q14204 4646 aaKnown RBP10.72□□□□□ -0.69
CCDC90B-202ENST00000455220 DNAH8Q96JB1 4490 aa10.72□□□□□ -0.69
CCDC90B-202ENST00000455220 IGLV5-52A0A0A0MRZ9 124 aa10.72□□□□□ -0.69
CCDC90B-202ENST00000455220 COX8AP10176 69 aa10.72□□□□□ -0.69
CCDC90B-202ENST00000455220 FUSP35637 526 aaKnown RBP eCLIP10.71□□□□□ -0.69
CCDC90B-202ENST00000455220 C9orf116Q5BN46 136 aaPredicted RBP10.71□□□□□ -0.69
CCDC90B-202ENST00000455220 BOD1L2Q8IYS8 172 aa10.71□□□□□ -0.69
CCDC90B-202ENST00000455220 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
CCDC90B-202ENST00000455220 ERG28Q9UKR5 140 aa10.7□□□□□ -0.7
CCDC90B-202ENST00000455220 LRP1BQ9NZR2 4599 aa10.7□□□□□ -0.7
CCDC90B-202ENST00000455220 DLEU1O43261 78 aa10.69□□□□□ -0.7
CCDC90B-202ENST00000455220 TLX1NBP0CAT3 122 aa10.69□□□□□ -0.7
CCDC90B-202ENST00000455220 COX17Q14061 63 aa10.69□□□□□ -0.7
CCDC90B-202ENST00000455220 C14orf144Q96I85 54 aa10.69□□□□□ -0.7
CCDC90B-202ENST00000455220 C12orf57Q99622 126 aa10.69□□□□□ -0.7
CCDC90B-202ENST00000455220 LINC00587B1AMM8 73 aa10.68□□□□□ -0.7
CCDC90B-202ENST00000455220 LINC00518Q8N0U6 118 aa10.68□□□□□ -0.7
CCDC90B-202ENST00000455220 NDUFC2-KCTD14E9PQ53 114 aa10.67□□□□□ -0.7
CCDC90B-202ENST00000455220 MEIG1Q5JSS6 88 aa10.67□□□□□ -0.7
CCDC90B-202ENST00000455220 TP73-AS1Q9UF72 201 aa10.67□□□□□ -0.7
CCDC90B-202ENST00000455220 LOC107984640A0A0U1RRK4 108 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 TIMM17BO60830 172 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 LINC01620Q4KN68 170 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 SLC25A34Q6PIV7 304 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 SDIM1Q6ZPB5 146 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 PKIGQ9Y2B9 76 aa10.66□□□□□ -0.7
CCDC90B-202ENST00000455220 SMIM13P0DJ93 91 aa10.65□□□□□ -0.7
CCDC90B-202ENST00000455220 PFN2P35080 140 aa10.65□□□□□ -0.7
CCDC90B-202ENST00000455220 SCGB1D4Q6XE38 83 aa10.65□□□□□ -0.7
CCDC90B-202ENST00000455220 Q6ZRP5 223 aa10.65□□□□□ -0.7
CCDC90B-202ENST00000455220 LITAFQ99732 161 aa10.65□□□□□ -0.7
CCDC90B-202ENST00000455220 GCSHP23434 173 aa10.64□□□□□ -0.71
CCDC90B-202ENST00000455220 LINC00158P58513 81 aa10.63□□□□□ -0.71
CCDC90B-202ENST00000455220 RPL18AQ02543 176 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-202ENST00000455220 CIRBPQ14011 172 aaKnown RBP10.63□□□□□ -0.71
CCDC90B-202ENST00000455220 A0A0U1RRA0 63 aa10.62□□□□□ -0.71
CCDC90B-202ENST00000455220 C16orf90A8MZG2 172 aa10.62□□□□□ -0.71
CCDC90B-202ENST00000455220 ADAMTSL4-AS1Q5T5F5 129 aa10.62□□□□□ -0.71
CCDC90B-202ENST00000455220 A0A096LNI7 61 aa10.61□□□□□ -0.71
CCDC90B-202ENST00000455220 TMEM238C9JI98 176 aa10.61□□□□□ -0.71
CCDC90B-202ENST00000455220 PTTG1IPP53801 180 aa10.61□□□□□ -0.71
CCDC90B-202ENST00000455220 MIR7-3HGQ8N6C7 128 aa10.61□□□□□ -0.71
CCDC90B-202ENST00000455220 UQCR10Q9UDW1 63 aa10.61□□□□□ -0.71
CCDC90B-202ENST00000455220 GAGE2BQ13066 116 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 GAGE2EQ4V326 116 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 C2orf91Q6ZV80 131 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 SND1-IT1Q9HBX3 110 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 HIGD1BQ9P298 99 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 GAGE2DQ9UEU5 116 aa10.6□□□□□ -0.71
CCDC90B-202ENST00000455220 KRTAP10-1P60331 282 aa10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 DAND5Q8N907 189 aa10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 SPANXDQ9BXN6 97 aa10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 PRO1933Q9H354 126 aa10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 SPANXB1Q9NS25 103 aaPredicted RBP10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 SPANXCQ9NY87 97 aa10.59□□□□□ -0.71
CCDC90B-202ENST00000455220 C9orf129Q5T035 196 aaKnown RBP10.58□□□□□ -0.72
CCDC90B-202ENST00000455220 Q6ZVH6 145 aa10.58□□□□□ -0.72
CCDC90B-202ENST00000455220 IGKV2-24A0A0C4DH68 120 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 LOC107984156A0A0G2JMH3 177 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 CHTF8P0CG12 524 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 ARL17AQ8IVW1 177 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 MIEN1Q9BRT3 115 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 XAGE1AQ9HD64 81 aa10.57□□□□□ -0.72
CCDC90B-202ENST00000455220 LINC00474Q9P2X8 69 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms