RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 RPL37AP61513 92 aaKnown RBP8.9□□□□□ -0.98
HDAC4-205ENST00000454542 RPL18AQ02543 176 aaKnown RBP8.9□□□□□ -0.98
HDAC4-205ENST00000454542 PACRGQ96M98 296 aaPredicted RBP8.9□□□□□ -0.98
HDAC4-205ENST00000454542 FAT3Q8TDW7 4589 aa8.9□□□□□ -0.98
HDAC4-205ENST00000454542 CXCL5P42830 114 aa8.89□□□□□ -0.99
HDAC4-205ENST00000454542 GAGE2BQ13066 116 aa8.89□□□□□ -0.99
HDAC4-205ENST00000454542 Q6ZRP5 223 aa8.89□□□□□ -0.99
HDAC4-205ENST00000454542 TRAV12-1A0A0B4J245 112 aa8.88□□□□□ -0.99
HDAC4-205ENST00000454542 HSBP1O75506 76 aa8.88□□□□□ -0.99
HDAC4-205ENST00000454542 PRSS2P07478 247 aa8.88□□□□□ -0.99
HDAC4-205ENST00000454542 ZNF22P17026 224 aaPredicted RBP8.88□□□□□ -0.99
HDAC4-205ENST00000454542 BAGE3Q86Y29 109 aa8.88□□□□□ -0.99
HDAC4-205ENST00000454542 TOMM7Q9P0U1 55 aa8.88□□□□□ -0.99
HDAC4-205ENST00000454542 IGLV5-39A0A0G2JS06 123 aa8.87□□□□□ -0.99
HDAC4-205ENST00000454542 SERF1AO75920 110 aa8.87□□□□□ -0.99
HDAC4-205ENST00000454542 SPINK8P0C7L1 97 aa8.87□□□□□ -0.99
HDAC4-205ENST00000454542 IFI27L1Q96BM0 104 aa8.87□□□□□ -0.99
HDAC4-205ENST00000454542 A0A1W2PNN7 141 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 C11orf86A6NJI1 115 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 NDUFC2-KCTD14E9PQ53 114 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 F8VRH5 84 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 H3BRM9 83 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 C6orf226Q5I0X4 101 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 FAM19A2Q8N3H0 131 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 COX7B2Q8TF08 81 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 DPH3Q96FX2 82 aa8.86□□□□□ -0.99
HDAC4-205ENST00000454542 FLG2Q5D862 2391 aaPredicted RBP8.86□□□□□ -0.99
HDAC4-205ENST00000454542 LRP1Q07954 4544 aaKnown RBP8.85□□□□□ -0.99
HDAC4-205ENST00000454542 HNRNPA3P51991 378 aaKnown RBP8.85□□□□□ -0.99
HDAC4-205ENST00000454542 CKS1BP61024 79 aa8.85□□□□□ -0.99
HDAC4-205ENST00000454542 C9orf116Q5BN46 136 aaPredicted RBP8.85□□□□□ -0.99
HDAC4-205ENST00000454542 NUPR1O60356 82 aa8.84□□□□□ -0.99
HDAC4-205ENST00000454542 NDUFA6P56556 154 aa8.84□□□□□ -0.99
HDAC4-205ENST00000454542 HIST1H2BKO60814 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BJP06899 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BOP23527 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BBP33778 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BDP58876 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BCP62807 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 PRR3P79522 188 aaKnown RBP8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST2H2BEQ16778 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BHQ93079 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BNQ99877 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 HIST1H2BMQ99879 126 aa8.83□□□□□ -1
HDAC4-205ENST00000454542 CHTOPQ9Y3Y2 248 aaKnown RBP8.83□□□□□ -1
HDAC4-205ENST00000454542 C9orf129Q5T035 196 aaKnown RBP8.82□□□□□ -1
HDAC4-205ENST00000454542 KRTAP7-1Q8IUC3 87 aa8.82□□□□□ -1
HDAC4-205ENST00000454542 FAM168BA1KXE4 195 aa8.81□□□□□ -1
HDAC4-205ENST00000454542 LEPROTL1O95214 131 aa8.81□□□□□ -1
HDAC4-205ENST00000454542 ODF1Q14990 250 aa8.81□□□□□ -1
HDAC4-205ENST00000454542 GAGE2EQ4V326 116 aa8.81□□□□□ -1
HDAC4-205ENST00000454542 GAGE2DQ9UEU5 116 aa8.81□□□□□ -1
HDAC4-205ENST00000454542 TMEM223A0PJW6 202 aa8.79□□□□□ -1
HDAC4-205ENST00000454542 TMEM170BQ5T4T1 132 aa8.79□□□□□ -1
HDAC4-205ENST00000454542 KRTAP29-1A8MX34 341 aaPredicted RBP8.78□□□□□ -1
HDAC4-205ENST00000454542 PHF5AQ7RTV0 110 aaKnown RBP8.78□□□□□ -1
HDAC4-205ENST00000454542 HSPB8Q9UJY1 196 aa8.78□□□□□ -1
HDAC4-205ENST00000454542 COA6Q5JTJ3 125 aaKnown RBP8.77□□□□□ -1.01
HDAC4-205ENST00000454542 FAM19A5Q7Z5A7 132 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-205ENST00000454542 ZNF625Q96I27 306 aaPredicted RBP8.77□□□□□ -1.01
HDAC4-205ENST00000454542 M0QXV9 152 aa8.76□□□□□ -1.01
HDAC4-205ENST00000454542 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
HDAC4-205ENST00000454542 DMBT1Q9UGM3 2413 aaPredicted RBP8.75□□□□□ -1.01
HDAC4-205ENST00000454542 HERC1Q15751 4861 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 ATP6V1G1O75348 118 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 S100A1P23297 94 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 SERTAD4-AS1Q5TG53 156 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 PSORS1C2Q9UIG4 136 aa8.75□□□□□ -1.01
HDAC4-205ENST00000454542 OXTP01178 125 aa8.74□□□□□ -1.01
HDAC4-205ENST00000454542 KRTAP11-1Q8IUC1 163 aa8.74□□□□□ -1.01
HDAC4-205ENST00000454542 PLA2G2DQ9UNK4 145 aa8.74□□□□□ -1.01
HDAC4-205ENST00000454542 FABP4P15090 132 aa8.73□□□□□ -1.01
HDAC4-205ENST00000454542 PLNP26678 52 aa8.73□□□□□ -1.01
HDAC4-205ENST00000454542 TP73-AS1Q9UF72 201 aa8.73□□□□□ -1.01
HDAC4-205ENST00000454542 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
HDAC4-205ENST00000454542 TNXBP22105 4242 aa8.72□□□□□ -1.01
HDAC4-205ENST00000454542 IGLV5-37A0A075B6J1 123 aa8.72□□□□□ -1.01
HDAC4-205ENST00000454542 H0Y8G0 127 aa8.72□□□□□ -1.01
HDAC4-205ENST00000454542 COX17Q14061 63 aa8.72□□□□□ -1.01
HDAC4-205ENST00000454542 DPM2O94777 84 aa8.71□□□□□ -1.02
HDAC4-205ENST00000454542 SRSF9Q13242 221 aaKnown RBP eCLIP8.71□□□□□ -1.02
HDAC4-205ENST00000454542 MAP1LC3CQ9BXW4 147 aa8.71□□□□□ -1.02
HDAC4-205ENST00000454542 SPINK6Q6UWN8 80 aa8.7□□□□□ -1.02
HDAC4-205ENST00000454542 C22orf24Q9Y442 160 aa8.7□□□□□ -1.02
HDAC4-205ENST00000454542 IGKCP01834 107 aa8.69□□□□□ -1.02
HDAC4-205ENST00000454542 TSPEAR-AS2P59090 65 aa8.69□□□□□ -1.02
HDAC4-205ENST00000454542 SYS1-DBNDD2H3BUS1 97 aa8.68□□□□□ -1.02
HDAC4-205ENST00000454542 PFN2P35080 140 aa8.68□□□□□ -1.02
HDAC4-205ENST00000454542 PMCHL2Q9BQD1 86 aa8.68□□□□□ -1.02
HDAC4-205ENST00000454542 SND1-IT1Q9HBX3 110 aa8.68□□□□□ -1.02
HDAC4-205ENST00000454542 LEPROTO15243 131 aa8.67□□□□□ -1.02
HDAC4-205ENST00000454542 UBE2BP63146 152 aa8.67□□□□□ -1.02
HDAC4-205ENST00000454542 C1orf137Q5JT78 98 aa8.67□□□□□ -1.02
HDAC4-205ENST00000454542 LINC01545Q5VT33 79 aa8.67□□□□□ -1.02
HDAC4-205ENST00000454542 MRPL55Q7Z7F7 128 aaKnown RBP8.67□□□□□ -1.02
HDAC4-205ENST00000454542 J3QL48 77 aa8.66□□□□□ -1.02
HDAC4-205ENST00000454542 IGLV7-43P04211 117 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms