RNA–Protein interactions for RNA: ENST00000453259.2

LYSMD3-202, Transcript of LysM domain containing 3, humanhuman

TSL 3

Gene LYSMD3, Length 553 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3-202ENST00000453259 RPL23P62829 140 aaKnown RBP8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00304Q8N9R0 145 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 XAGE1AQ9HD64 81 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 NAT8Q9UHE5 227 aa8.33□□□□□ -1.08
LYSMD3-202ENST00000453259 A0A1B0GXF2 115 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 AMELXQ99217 191 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 ALKBH7Q9BT30 221 aaPredicted RBP8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 CYSLTR1Q9Y271 337 aa8.32□□□□□ -1.08
LYSMD3-202ENST00000453259 K7EMI3 77 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 HERVK_113P63121 156 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 ADIRFQ15847 76 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 PAPPA-AS1Q5QFB9 102 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00469Q8N7U9 141 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 VCX2Q9H322 139 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 TOMM7Q9P0U1 55 aa8.31□□□□□ -1.08
LYSMD3-202ENST00000453259 IGLV7-46A0A075B6I9 117 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00173Q6ZV60 143 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 PRELID3AQ96N28 172 aa8.3□□□□□ -1.08
LYSMD3-202ENST00000453259 KRTAP13-2Q52LG2 175 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 MRPL54Q6P161 138 aaKnown RBP8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 C2orf66Q6UXQ4 117 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 KRTAP13-1Q8IUC0 172 aa8.29□□□□□ -1.08
LYSMD3-202ENST00000453259 IGLV5-37A0A075B6J1 123 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 IGKV2D-26A0A0A0MRZ7 120 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 UBE2AP49459 152 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 ORMDL2Q53FV1 153 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 LINC00167Q96N53 147 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 RETNLBQ9BQ08 111 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 MAP1LC3AQ9H492 121 aa8.28□□□□□ -1.08
LYSMD3-202ENST00000453259 G0S2P27469 103 aa8.27□□□□□ -1.09
LYSMD3-202ENST00000453259 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
LYSMD3-202ENST00000453259 MUC17Q685J3 4493 aa8.26□□□□□ -1.09
LYSMD3-202ENST00000453259 IGIPA6NJ69 53 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 RPL37AP8A6NKH3 93 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 Q8N8P6 123 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 NKAPP1Q8N9T2 125 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 CDKN2A-AS1Q9UH64 79 aa8.25□□□□□ -1.09
LYSMD3-202ENST00000453259 SPAG11AQ6PDA7 123 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 FP248Q71RG6 208 aaPredicted RBP8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 AKAP14Q86UN6 197 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 ANAPC11Q9NYG5 84 aa8.24□□□□□ -1.09
LYSMD3-202ENST00000453259 PNRC1Q12796 327 aaPredicted RBP8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 TIMM17AQ99595 171 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PPDPFQ9H3Y8 114 aa8.23□□□□□ -1.09
LYSMD3-202ENST00000453259 PEA15Q15121 130 aa8.22□□□□□ -1.09
LYSMD3-202ENST00000453259 NXT2Q9NPJ8 142 aaKnown RBP8.22□□□□□ -1.09
LYSMD3-202ENST00000453259 LOC389332A0A1B0GUA5 103 aa8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC01547P58512 204 aaPredicted RBP8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 ZC2HC1BQ5TFG8 222 aa8.21□□□□□ -1.1
LYSMD3-202ENST00000453259 GAGE10A6NGK3 116 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC01549A6NIU2 74 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 SMIM1B2RUZ4 78 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 COX7B2Q8TF08 81 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 GNB1LQ9BYB4 327 aa8.2□□□□□ -1.1
LYSMD3-202ENST00000453259 IGLV5-45A0A087WSX0 123 aa8.19□□□□□ -1.1
LYSMD3-202ENST00000453259 TINCRA0A1B0GVN0 87 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 C9JQL5 133 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 ASB16-AS1Q495Z4 193 aa8.18□□□□□ -1.1
LYSMD3-202ENST00000453259 ERASQ7Z444 233 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 LINC00337Q8N6G1 96 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 TOMM6Q96B49 74 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 TMEM126AQ9H061 195 aa8.17□□□□□ -1.1
LYSMD3-202ENST00000453259 IGKV2-28A0A075B6P5 120 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 ATP5LO75964 103 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 IGKV2D-28P01615 120 aa8.16□□□□□ -1.1
LYSMD3-202ENST00000453259 PRLHP81277 87 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 FAM19A1Q7Z5A9 133 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 PLEKHB2Q96CS7 222 aa8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 MRPL18Q9H0U6 180 aaKnown RBP8.15□□□□□ -1.1
LYSMD3-202ENST00000453259 SEC61BP60468 96 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-202ENST00000453259 RPL24P83731 157 aaKnown RBP8.14□□□□□ -1.11
LYSMD3-202ENST00000453259 RAB5BP61020 215 aa8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 KRTAP13-3Q3SY46 172 aa8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 ZNF706Q9Y5V0 76 aaPredicted RBP8.13□□□□□ -1.11
LYSMD3-202ENST00000453259 H3BRM9 83 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 SRSF3P84103 164 aaKnown RBP8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 COX17Q14061 63 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 CBLN2Q8IUK8 224 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 ANAPC16Q96DE5 110 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 SCGB3A1Q96QR1 104 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 CRCT1Q9UGL9 99 aa8.12□□□□□ -1.11
LYSMD3-202ENST00000453259 M0R378 163 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 VPREB1P12018 145 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 SFTA2Q6UW10 78 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 C3orf22Q8N5N4 141 aa8.11□□□□□ -1.11
LYSMD3-202ENST00000453259 SPINK1P00995 79 aa8.1□□□□□ -1.11
LYSMD3-202ENST00000453259 MT-ND4LP03901 98 aa8.1□□□□□ -1.11
LYSMD3-202ENST00000453259 A0A1B0GVG6 124 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 TMEM238C9JI98 176 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 CST9LQ9H4G1 147 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 SND1-IT1Q9HBX3 110 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 NDUFA12Q9UI09 145 aa8.09□□□□□ -1.11
LYSMD3-202ENST00000453259 SPINK8P0C7L1 97 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 FAM19A2Q8N3H0 131 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 SPRR4Q96PI1 79 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 HIGD2AQ9BW72 106 aa8.08□□□□□ -1.12
LYSMD3-202ENST00000453259 IGLV5-39A0A0G2JS06 123 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms