RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 LYRM1O43325 122 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 IL7P13232 177 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 FCER1GP30273 86 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 DEFA1P59665 94 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 RPL32P62910 135 aaKnown RBP4.15□□□□□ -1.75
LINC01961-201ENST00000449954 FAM19A1Q7Z5A9 133 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 CBLN2Q8IUK8 224 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 C9orf62Q8N4C0 152 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 TMEM18Q96B42 140 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 SPRR4Q96PI1 79 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 CBY1Q9Y3M2 126 aa4.15□□□□□ -1.75
LINC01961-201ENST00000449954 IGLV5-37A0A075B6J1 123 aa4.14□□□□□ -1.75
LINC01961-201ENST00000449954 MT2AP02795 61 aa4.14□□□□□ -1.75
LINC01961-201ENST00000449954 POLR2KP53803 58 aaKnown RBP4.14□□□□□ -1.75
LINC01961-201ENST00000449954 CKS1BP61024 79 aa4.14□□□□□ -1.75
LINC01961-201ENST00000449954 NKAPP1Q8N9T2 125 aa4.14□□□□□ -1.75
LINC01961-201ENST00000449954 IGKV2-28A0A075B6P5 120 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 MAP1LC3B2A6NCE7 125 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 PFDN1O60925 122 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 IGKV2D-28P01615 120 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 PRSS2P07478 247 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 PCP4P48539 62 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 H2BFSP57053 126 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 MAP1LC3BQ9GZQ8 125 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 MDN1Q9NU22 5596 aa4.13□□□□□ -1.75
LINC01961-201ENST00000449954 C9orf92A6NGG3 77 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 H0Y8G0 127 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 PLA2G10O15496 165 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 HBBP68871 147 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 RGS21Q2M5E4 152 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 Q6Q795 121 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 LINC01551Q86U37 167 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 LINC01561Q8N1V8 128 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 HIGD2AQ9BW72 106 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 TMEM126AQ9H061 195 aa4.12□□□□□ -1.75
LINC01961-201ENST00000449954 VCYO14598 125 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 PAGE4O60829 102 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 ATP6V1G1O75348 118 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 RPL35P42766 123 aaKnown RBP4.11□□□□□ -1.75
LINC01961-201ENST00000449954 TMUB2Q71RG4 321 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 SMIM12Q96EX1 92 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 KMT2DO14686 5537 aa4.11□□□□□ -1.75
LINC01961-201ENST00000449954 LOC105371267A0A1B0GV96 52 aa4.1□□□□□ -1.75
LINC01961-201ENST00000449954 MT1FP04733 61 aa4.1□□□□□ -1.75
LINC01961-201ENST00000449954 MT3P25713 68 aa4.1□□□□□ -1.75
LINC01961-201ENST00000449954 MRPS36P82909 103 aaKnown RBP4.1□□□□□ -1.75
LINC01961-201ENST00000449954 AKR1C8PQ5T2L2 129 aa4.1□□□□□ -1.75
LINC01961-201ENST00000449954 SPANXA1Q9NS26 97 aa4.1□□□□□ -1.75
LINC01961-201ENST00000449954 F8VRH5 84 aa4.09□□□□□ -1.75
LINC01961-201ENST00000449954 RPL37P61927 97 aaKnown RBP4.09□□□□□ -1.75
LINC01961-201ENST00000449954 C6orf226Q5I0X4 101 aa4.09□□□□□ -1.75
LINC01961-201ENST00000449954 SSBP3-AS1Q7Z2R9 100 aa4.09□□□□□ -1.75
LINC01961-201ENST00000449954 Q8IZM0 81 aa4.09□□□□□ -1.75
LINC01961-201ENST00000449954 BIN3Q9NQY0 253 aa4.09□□□□□ -1.75
LINC01961-201ENST00000449954 FAM240BA0A1B0GVZ2 78 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 TMEM238C9JI98 176 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 M0R378 163 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 IGLV6-57P01721 117 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 MOBPQ13875 183 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 CENPWQ5EE01 88 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 KRTAP5-11Q6L8G4 156 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 ENKURQ8TC29 256 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 TOMM7Q9P0U1 55 aa4.08□□□□□ -1.76
LINC01961-201ENST00000449954 TCAPO15273 167 aa4.07□□□□□ -1.76
LINC01961-201ENST00000449954 PPP1R17O96001 155 aa4.07□□□□□ -1.76
LINC01961-201ENST00000449954 CXCL5P42830 114 aa4.07□□□□□ -1.76
LINC01961-201ENST00000449954 Q6ZN92 141 aa4.07□□□□□ -1.76
LINC01961-201ENST00000449954 FAM104AQ969W3 186 aa4.07□□□□□ -1.76
LINC01961-201ENST00000449954 BORCS7-ASMTA0A0B4J1R7 106 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 KRTAP2-3P0C7H8 128 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 GNG4P50150 75 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 LINC00483Q53H64 154 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 FAM231DQ6ZW35 169 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 C11orf52Q96A22 123 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 ALKBH7Q9BT30 221 aaPredicted RBP4.06□□□□□ -1.76
LINC01961-201ENST00000449954 KRTAP2-4Q9BYR9 128 aa4.06□□□□□ -1.76
LINC01961-201ENST00000449954 IGLV9-49A0A0B4J1Y8 123 aa4.05□□□□□ -1.76
LINC01961-201ENST00000449954 PPP1R2P9O14990 202 aa4.05□□□□□ -1.76
LINC01961-201ENST00000449954 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
LINC01961-201ENST00000449954 LIMD2Q9BT23 127 aa4.05□□□□□ -1.76
LINC01961-201ENST00000449954 VCX2Q9H322 139 aa4.05□□□□□ -1.76
LINC01961-201ENST00000449954 TRBV20OR9-2A0A075B6H5 130 aa4.04□□□□□ -1.76
LINC01961-201ENST00000449954 SCO1O75880 301 aa4.04□□□□□ -1.76
LINC01961-201ENST00000449954 RPL7L1Q6DKI1 246 aaKnown RBP4.04□□□□□ -1.76
LINC01961-201ENST00000449954 AKAP14Q86UN6 197 aa4.04□□□□□ -1.76
LINC01961-201ENST00000449954 C20orf202A1L168 122 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 SSNA1O43805 119 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 LGALS3P17931 250 aaKnown RBP4.03□□□□□ -1.76
LINC01961-201ENST00000449954 CCL20P78556 96 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 KCNRGQ8N5I3 272 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 OCC1Q8TAD7 63 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 TMEM191AQ9H0A3 160 aa4.03□□□□□ -1.76
LINC01961-201ENST00000449954 RAB4AP20338 218 aa4.02□□□□□ -1.77
LINC01961-201ENST00000449954 IFI27P40305 119 aaPredicted RBP4.02□□□□□ -1.77
LINC01961-201ENST00000449954 S100A12P80511 92 aa4.02□□□□□ -1.77
LINC01961-201ENST00000449954 FAM19A3Q7Z5A8 133 aa4.02□□□□□ -1.77
LINC01961-201ENST00000449954 BORCS7Q96B45 105 aa4.02□□□□□ -1.77
LINC01961-201ENST00000449954 VPREB1P12018 145 aa4.01□□□□□ -1.77
LINC01961-201ENST00000449954 LCE1EQ5T753 118 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms