RNA–Protein interactions for RNA: ENST00000449372.6

SYNGAP1-204, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-204ENST00000449372 NAV2Q8IVL1 2488 aa9.59□□□□□ -0.87
SYNGAP1-204ENST00000449372 A8MTW9 85 aa9.59□□□□□ -0.87
SYNGAP1-204ENST00000449372 STHQ8IWL8 128 aa9.59□□□□□ -0.87
SYNGAP1-204ENST00000449372 SNURFQ9Y675 71 aa9.58□□□□□ -0.88
SYNGAP1-204ENST00000449372 CCKP06307 115 aa9.58□□□□□ -0.88
SYNGAP1-204ENST00000449372 PLA2G2AP14555 144 aa9.58□□□□□ -0.88
SYNGAP1-204ENST00000449372 TRBV7-6A0A0J9YX20 115 aa9.58□□□□□ -0.88
SYNGAP1-204ENST00000449372 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.58□□□□□ -0.88
SYNGAP1-204ENST00000449372 KRTAP1-1Q07627 177 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 MPLKIPQ8TAP9 179 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 TRAV7A0A075B6U4 112 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 F8WEM9 126 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 IGLV5-39A0A0G2JS06 123 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 LECT2O14960 151 aa9.57□□□□□ -0.88
SYNGAP1-204ENST00000449372 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
SYNGAP1-204ENST00000449372 SS18Q15532 418 aa9.56□□□□□ -0.88
SYNGAP1-204ENST00000449372 RMI2Q96E14 147 aa9.56□□□□□ -0.88
SYNGAP1-204ENST00000449372 TRGV1A0A0A0MS02 117 aa9.56□□□□□ -0.88
SYNGAP1-204ENST00000449372 MIR7-3HGQ8N6C7 128 aa9.56□□□□□ -0.88
SYNGAP1-204ENST00000449372 IGHV3-38A0A0C4DH36 116 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 K7EQD1 137 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 SLPIP03973 132 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 COX6A2Q02221 97 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 SMIM11BQ8TCY0 68 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 C18orf65Q6ZTR6 163 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 LINC00337Q8N6G1 96 aa9.55□□□□□ -0.88
SYNGAP1-204ENST00000449372 FAM19A3Q7Z5A8 133 aa9.54□□□□□ -0.88
SYNGAP1-204ENST00000449372 MAP6D1Q9H9H5 199 aa9.53□□□□□ -0.88
SYNGAP1-204ENST00000449372 C4orf3Q8WVX3 66 aa9.53□□□□□ -0.88
SYNGAP1-204ENST00000449372 PROK1P58294 105 aa9.52□□□□□ -0.88
SYNGAP1-204ENST00000449372 TRBV10-3A0A0K0K1G6 114 aa9.52□□□□□ -0.89
SYNGAP1-204ENST00000449372 LINC00242Q5T6M2 205 aa9.52□□□□□ -0.89
SYNGAP1-204ENST00000449372 UBL5Q9BZL1 73 aa9.52□□□□□ -0.89
SYNGAP1-204ENST00000449372 ORMDL1Q9P0S3 153 aa9.52□□□□□ -0.89
SYNGAP1-204ENST00000449372 LINC00158P58513 81 aa9.51□□□□□ -0.89
SYNGAP1-204ENST00000449372 CREBBPQ92793 2442 aa9.51□□□□□ -0.89
SYNGAP1-204ENST00000449372 IGHV3OR16-12A0A075B7B8 117 aa9.51□□□□□ -0.89
SYNGAP1-204ENST00000449372 SND1-IT1Q9HBX3 110 aa9.51□□□□□ -0.89
SYNGAP1-204ENST00000449372 SMIM1B2RUZ4 78 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 ESM1Q9NQ30 184 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 IGKV2-28A0A075B6P5 120 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 IGKV2D-28P01615 120 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 SLURP1P55000 103 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 BCE1O60756 84 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 Q9UF83 564 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 J3QKU1 62 aa9.5□□□□□ -0.89
SYNGAP1-204ENST00000449372 TOMM7Q9P0U1 55 aa9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 FLNAP21333 2647 aaKnown RBP9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 ITPR2Q14571 2701 aa9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 TRGV2A0A075B6R0 118 aa9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 DNAJC9-AS1A6NH13 148 aa9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 DEFB136Q30KP8 78 aa9.49□□□□□ -0.89
SYNGAP1-204ENST00000449372 NF1P21359 2839 aa9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 C11orf44Q8N8P7 122 aa9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 C11orf72Q8NBR9 251 aa9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 JMJD7-PLA2G4BH0Y9G9 81 aa9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 DEFB114Q30KQ6 69 aa9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 MRPL55Q7Z7F7 128 aaKnown RBP9.48□□□□□ -0.89
SYNGAP1-204ENST00000449372 IBA57-AS1B1ANH7 110 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 CDC42SE2Q9NRR3 84 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 C16orf74Q96GX8 76 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 TRAV10A0A0B4J240 114 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 TRGV4A0A0C4DH28 118 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 NDUFC1O43677 76 aa9.47□□□□□ -0.89
SYNGAP1-204ENST00000449372 ATP5EP56381 51 aaPredicted RBP9.46□□□□□ -0.89
SYNGAP1-204ENST00000449372 CD164Q04900 197 aa9.46□□□□□ -0.89
SYNGAP1-204ENST00000449372 Q6ZSN1 163 aa9.46□□□□□ -0.9
SYNGAP1-204ENST00000449372 HELZ2Q9BYK8 2649 aaKnown RBP9.46□□□□□ -0.9
SYNGAP1-204ENST00000449372 PAX4O43316 350 aa9.45□□□□□ -0.9
SYNGAP1-204ENST00000449372 FAM229BQ4G0N7 80 aa9.44□□□□□ -0.9
SYNGAP1-204ENST00000449372 UNC79Q9P2D8 2635 aa9.44□□□□□ -0.9
SYNGAP1-204ENST00000449372 TRBV6-4A0A1B0GX49 114 aa9.44□□□□□ -0.9
SYNGAP1-204ENST00000449372 ZNF561-AS1K7EIQ3 104 aa9.43□□□□□ -0.9
SYNGAP1-204ENST00000449372 Q6ZTI0 123 aa9.43□□□□□ -0.9
SYNGAP1-204ENST00000449372 LAMTOR3Q9UHA4 124 aa9.42□□□□□ -0.9
SYNGAP1-204ENST00000449372 DAD1P61803 113 aa9.42□□□□□ -0.9
SYNGAP1-204ENST00000449372 MIFP14174 115 aa9.42□□□□□ -0.9
SYNGAP1-204ENST00000449372 HAMPP81172 84 aa9.42□□□□□ -0.9
SYNGAP1-204ENST00000449372 H3BQ85 93 aa9.41□□□□□ -0.9
SYNGAP1-204ENST00000449372 RNASE1P07998 156 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-204ENST00000449372 GCN1Q92616 2671 aaKnown RBP9.41□□□□□ -0.9
SYNGAP1-204ENST00000449372 CCL18P55774 89 aa9.4□□□□□ -0.9
SYNGAP1-204ENST00000449372 TMEM256-PLSCR3K7ERE1 68 aa9.4□□□□□ -0.91
SYNGAP1-204ENST00000449372 C11orf68Q9H3H3 251 aaKnown RBP9.4□□□□□ -0.91
SYNGAP1-204ENST00000449372 TLN2Q9Y4G6 2542 aa9.4□□□□□ -0.91
SYNGAP1-204ENST00000449372 LINC01547P58512 204 aaPredicted RBP9.39□□□□□ -0.91
SYNGAP1-204ENST00000449372 IGKV3OR2-268A0A0C4DH90 116 aa9.39□□□□□ -0.91
SYNGAP1-204ENST00000449372 NOP10Q9NPE3 64 aaKnown RBP9.39□□□□□ -0.91
SYNGAP1-204ENST00000449372 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
SYNGAP1-204ENST00000449372 OTOGQ6ZRI0 2925 aa9.38□□□□□ -0.91
SYNGAP1-204ENST00000449372 MYO9AB2RTY4 2548 aa9.38□□□□□ -0.91
SYNGAP1-204ENST00000449372 PLAC8L1A1L4L8 177 aa9.38□□□□□ -0.91
SYNGAP1-204ENST00000449372 LINC01006Q8NI28 216 aa9.38□□□□□ -0.91
SYNGAP1-204ENST00000449372 NIPBLQ6KC79 2804 aaeCLIP9.38□□□□□ -0.91
SYNGAP1-204ENST00000449372 PRR15Q8IV56 129 aa9.37□□□□□ -0.91
SYNGAP1-204ENST00000449372 C1orf158Q8N1D5 194 aa9.37□□□□□ -0.91
SYNGAP1-204ENST00000449372 SONP18583 2426 aaKnown RBP9.36□□□□□ -0.91
SYNGAP1-204ENST00000449372 TRBV7-4A0A0J9YYF1 115 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.3 ms