RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 ANKRD39Q53RE8 183 aa9.53□□□□□ -0.88
SHANK2-210ENST00000449116 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
SHANK2-210ENST00000449116 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.52□□□□□ -0.89
SHANK2-210ENST00000449116 LGALS3P17931 250 aaKnown RBP9.52□□□□□ -0.89
SHANK2-210ENST00000449116 TSPEAR-AS2P59090 65 aa9.52□□□□□ -0.89
SHANK2-210ENST00000449116 CARD19Q96LW7 228 aa9.52□□□□□ -0.89
SHANK2-210ENST00000449116 DNAH5Q8TE73 4624 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 PKD1P98161 4303 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 IGKV2D-26A0A0A0MRZ7 120 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 SFTA2Q6UW10 78 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 UNQ6190/PRO20217Q6UXQ8 127 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 Q6ZRU5 148 aa9.51□□□□□ -0.89
SHANK2-210ENST00000449116 HECTD4Q9Y4D8 3996 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 IGLV5-52A0A0A0MRZ9 124 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 TRBV30A0A0K0K1B3 111 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 A0A1B0GVY2 172 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 NMUP48645 174 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 KRTAP10-2P60368 255 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 C10orf25Q5T742 122 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 ZNF625Q96I27 306 aaPredicted RBP9.5□□□□□ -0.89
SHANK2-210ENST00000449116 VAMP8Q9BV40 100 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 PGPEP1Q9NXJ5 209 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 NDUFA12Q9UI09 145 aa9.5□□□□□ -0.89
SHANK2-210ENST00000449116 CDPF1Q6NVV7 123 aa9.49□□□□□ -0.89
SHANK2-210ENST00000449116 C6orf48Q9UBA6 75 aa9.49□□□□□ -0.89
SHANK2-210ENST00000449116 MYMXA0A1B0GTQ4 84 aa9.48□□□□□ -0.89
SHANK2-210ENST00000449116 FUSP35637 526 aaKnown RBP eCLIP9.48□□□□□ -0.891e-6■■■□□ 17.1
SHANK2-210ENST00000449116 RNF151Q2KHN1 245 aa9.48□□□□□ -0.89
SHANK2-210ENST00000449116 C9orf163Q8N9P6 203 aa9.48□□□□□ -0.89
SHANK2-210ENST00000449116 SMIM6P0DI80 62 aa9.47□□□□□ -0.89
SHANK2-210ENST00000449116 HERV-K104P63124 156 aa9.47□□□□□ -0.89
SHANK2-210ENST00000449116 PAM16Q9Y3D7 125 aa9.47□□□□□ -0.89
SHANK2-210ENST00000449116 SPATA45Q537H7 98 aa9.46□□□□□ -0.9
SHANK2-210ENST00000449116 TTTY13Q9BZ97 58 aa9.46□□□□□ -0.9
SHANK2-210ENST00000449116 ZNF815PA8K554 130 aa9.45□□□□□ -0.9
SHANK2-210ENST00000449116 S100A12P80511 92 aa9.45□□□□□ -0.9
SHANK2-210ENST00000449116 C9orf116Q5BN46 136 aaPredicted RBP9.45□□□□□ -0.9
SHANK2-210ENST00000449116 PCP2Q8IVA1 136 aa9.45□□□□□ -0.9
SHANK2-210ENST00000449116 ERG28Q9UKR5 140 aa9.44□□□□□ -0.9
SHANK2-210ENST00000449116 PKIGQ9Y2B9 76 aa9.44□□□□□ -0.9
SHANK2-210ENST00000449116 TLX1NBP0CAT3 122 aa9.43□□□□□ -0.9
SHANK2-210ENST00000449116 LINC01620Q4KN68 170 aa9.43□□□□□ -0.9
SHANK2-210ENST00000449116 MEIG1Q5JSS6 88 aa9.43□□□□□ -0.9
SHANK2-210ENST00000449116 A0A0J9YXY3 114 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 LOC107984640A0A0U1RRK4 108 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 LINC00587B1AMM8 73 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 GCSHP23434 173 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 COX17Q14061 63 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 KRTAP17-1Q9BYP8 105 aa9.42□□□□□ -0.9
SHANK2-210ENST00000449116 NDUFC2-KCTD14E9PQ53 114 aa9.41□□□□□ -0.9
SHANK2-210ENST00000449116 COX8AP10176 69 aa9.41□□□□□ -0.9
SHANK2-210ENST00000449116 PFN2P35080 140 aa9.41□□□□□ -0.9
SHANK2-210ENST00000449116 SDIM1Q6ZPB5 146 aa9.41□□□□□ -0.9
SHANK2-210ENST00000449116 RPL18AQ02543 176 aaKnown RBP9.4□□□□□ -0.9
SHANK2-210ENST00000449116 SCGB1D4Q6XE38 83 aa9.4□□□□□ -0.9
SHANK2-210ENST00000449116 BOD1L2Q8IYS8 172 aa9.4□□□□□ -0.9
SHANK2-210ENST00000449116 DYNC1H1Q14204 4646 aaKnown RBP9.4□□□□□ -0.91
SHANK2-210ENST00000449116 PKHD1P08F94 4074 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 DNAH8Q96JB1 4490 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 C16orf90A8MZG2 172 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 DLEU1O43261 78 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 SMIM13P0DJ93 91 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 LINC00158P58513 81 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 CIRBPQ14011 172 aaKnown RBP9.39□□□□□ -0.91
SHANK2-210ENST00000449116 Q6ZRP5 223 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 C14orf144Q96I85 54 aa9.39□□□□□ -0.91
SHANK2-210ENST00000449116 LRP1BQ9NZR2 4599 aa9.38□□□□□ -0.91
SHANK2-210ENST00000449116 A0A0U1RRA0 63 aa9.38□□□□□ -0.91
SHANK2-210ENST00000449116 GAGE2BQ13066 116 aa9.38□□□□□ -0.91
SHANK2-210ENST00000449116 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
SHANK2-210ENST00000449116 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
SHANK2-210ENST00000449116 A0A096LNI7 61 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 TIMM17BO60830 172 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 PTTG1IPP53801 180 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 KRTAP10-1P60331 282 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 SLC25A34Q6PIV7 304 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 C12orf57Q99622 126 aa9.37□□□□□ -0.91
SHANK2-210ENST00000449116 IGKV2-24A0A0C4DH68 120 aa9.36□□□□□ -0.91
SHANK2-210ENST00000449116 MIR7-3HGQ8N6C7 128 aa9.36□□□□□ -0.91
SHANK2-210ENST00000449116 LINC00474Q9P2X8 69 aa9.36□□□□□ -0.91
SHANK2-210ENST00000449116 TP73-AS1Q9UF72 201 aa9.36□□□□□ -0.91
SHANK2-210ENST00000449116 TMEM238C9JI98 176 aa9.35□□□□□ -0.91
SHANK2-210ENST00000449116 LITAFQ99732 161 aa9.35□□□□□ -0.91
SHANK2-210ENST00000449116 CHTF8P0CG12 524 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 ADAMTSL4-AS1Q5T5F5 129 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 LINC00518Q8N0U6 118 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 DAND5Q8N907 189 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 SND1-IT1Q9HBX3 110 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 XAGE1AQ9HD64 81 aa9.34□□□□□ -0.91
SHANK2-210ENST00000449116 C9orf129Q5T035 196 aaKnown RBP9.33□□□□□ -0.92
SHANK2-210ENST00000449116 SPACA4Q8TDM5 124 aa9.33□□□□□ -0.92
SHANK2-210ENST00000449116 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.33□□□□□ -0.92
SHANK2-210ENST00000449116 PANO1I0J062 215 aa9.32□□□□□ -0.92
SHANK2-210ENST00000449116 SPANXDQ9BXN6 97 aa9.32□□□□□ -0.92
SHANK2-210ENST00000449116 SPANXCQ9NY87 97 aa9.32□□□□□ -0.92
SHANK2-210ENST00000449116 UQCR10Q9UDW1 63 aa9.32□□□□□ -0.92
SHANK2-210ENST00000449116 Q6ZSA8 131 aa9.31□□□□□ -0.92
SHANK2-210ENST00000449116 FAM30AQ9NZY2 134 aa9.31□□□□□ -0.92
SHANK2-210ENST00000449116 PCLOQ9Y6V0 5065 aa9.31□□□□□ -0.92
SHANK2-210ENST00000449116 C2orf91Q6ZV80 131 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms