RNA–Protein interactions for RNA: ENST00000448340.5

HLCS-205, Transcript of holocarboxylase synthetase, humanhuman

TSL 1 (best)

Gene HLCS, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-205ENST00000448340 INAFM2P0DMQ5 153 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 SDIM1Q6ZPB5 146 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 Q6ZRU5 148 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 TOMM7Q9P0U1 55 aa11.37□□□□□ -0.59
HLCS-205ENST00000448340 SYS1-DBNDD2H3BUS1 97 aa11.36□□□□□ -0.59
HLCS-205ENST00000448340 XGP55808 180 aa11.36□□□□□ -0.59
HLCS-205ENST00000448340 C6orf226Q5I0X4 101 aa11.36□□□□□ -0.59
HLCS-205ENST00000448340 IGLV5-39A0A0G2JS06 123 aa11.35□□□□□ -0.59
HLCS-205ENST00000448340 PLNP26678 52 aa11.35□□□□□ -0.59
HLCS-205ENST00000448340 RNF151Q2KHN1 245 aa11.35□□□□□ -0.59
HLCS-205ENST00000448340 UNQ6190/PRO20217Q6UXQ8 127 aa11.34□□□□□ -0.59
HLCS-205ENST00000448340 Q6ZSA8 131 aa11.34□□□□□ -0.59
HLCS-205ENST00000448340 HIST3H2BBQ8N257 126 aa11.34□□□□□ -0.59
HLCS-205ENST00000448340 COX7B2Q8TF08 81 aa11.34□□□□□ -0.59
HLCS-205ENST00000448340 PKIGQ9Y2B9 76 aa11.34□□□□□ -0.59
HLCS-205ENST00000448340 DPM2O94777 84 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 CXCL5P42830 114 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 CKS1BP61024 79 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 C10orf25Q5T742 122 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 PET117Q6UWS5 81 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 FAM30AQ9NZY2 134 aa11.33□□□□□ -0.6
HLCS-205ENST00000448340 TMEM223A0PJW6 202 aa11.32□□□□□ -0.6
HLCS-205ENST00000448340 C3orf79P0CE67 100 aa11.32□□□□□ -0.6
HLCS-205ENST00000448340 S100A2P29034 98 aa11.32□□□□□ -0.6
HLCS-205ENST00000448340 FLG2Q5D862 2391 aaPredicted RBP11.32□□□□□ -0.6
HLCS-205ENST00000448340 TRBV30A0A0K0K1B3 111 aa11.31□□□□□ -0.6
HLCS-205ENST00000448340 IGKCP01834 107 aa11.31□□□□□ -0.6
HLCS-205ENST00000448340 LINC01545Q5VT33 79 aa11.31□□□□□ -0.6
HLCS-205ENST00000448340 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
HLCS-205ENST00000448340 C6orf48Q9UBA6 75 aa11.31□□□□□ -0.6
HLCS-205ENST00000448340 KRTDAPP60985 99 aa11.3□□□□□ -0.6
HLCS-205ENST00000448340 SNRPEP62304 92 aaKnown RBP11.3□□□□□ -0.6
HLCS-205ENST00000448340 LOC107984640A0A0U1RRK4 108 aa11.29□□□□□ -0.6
HLCS-205ENST00000448340 HIST1H2BLQ99880 126 aa11.29□□□□□ -0.6
HLCS-205ENST00000448340 SRRM2Q9UQ35 2752 aaKnown RBP11.29□□□□□ -0.6
HLCS-205ENST00000448340 C5orf52A6NGY3 159 aa11.28□□□□□ -0.6
HLCS-205ENST00000448340 Q5VSD8 79 aa11.28□□□□□ -0.6
HLCS-205ENST00000448340 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.28□□□□□ -0.6
HLCS-205ENST00000448340 TLX1NBP0CAT3 122 aa11.27□□□□□ -0.61
HLCS-205ENST00000448340 CIRBPQ14011 172 aaKnown RBP11.27□□□□□ -0.61
HLCS-205ENST00000448340 A0A096LNI7 61 aa11.26□□□□□ -0.61
HLCS-205ENST00000448340 LINC00474Q9P2X8 69 aa11.26□□□□□ -0.61
HLCS-205ENST00000448340 C20orf202A1L168 122 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 PANO1I0J062 215 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 CHTF8P0CG12 524 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 HERVK_113P61574 105 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 SFTA2Q6UW10 78 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 SPACA4Q8TDM5 124 aa11.25□□□□□ -0.61
HLCS-205ENST00000448340 IGKV2-24A0A0C4DH68 120 aa11.24□□□□□ -0.61
HLCS-205ENST00000448340 PTTG1IPP53801 180 aa11.24□□□□□ -0.61
HLCS-205ENST00000448340 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
HLCS-205ENST00000448340 C9orf116Q5BN46 136 aaPredicted RBP11.24□□□□□ -0.61
HLCS-205ENST00000448340 NDUFC2-KCTD14E9PQ53 114 aa11.23□□□□□ -0.61
HLCS-205ENST00000448340 RPL18AQ02543 176 aaKnown RBP11.23□□□□□ -0.61
HLCS-205ENST00000448340 SCXQ7RTU7 201 aa11.23□□□□□ -0.61
HLCS-205ENST00000448340 DPH3Q96FX2 82 aa11.23□□□□□ -0.61
HLCS-205ENST00000448340 LEPROTO15243 131 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 AKR1D1P51857 326 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 HAMPP81172 84 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 MAJINQ3KP22 176 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 Q6ZRP5 223 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 CIRBP-AS1Q8TBR5 109 aa11.22□□□□□ -0.61
HLCS-205ENST00000448340 PLEKHB2Q96CS7 222 aa11.21□□□□□ -0.61
HLCS-205ENST00000448340 ZNF625Q96I27 306 aaPredicted RBP11.21□□□□□ -0.61
HLCS-205ENST00000448340 A0A087WYN8 130 aa11.19□□□□□ -0.62
HLCS-205ENST00000448340 SMR3BP02814 79 aaPredicted RBP11.19□□□□□ -0.62
HLCS-205ENST00000448340 E9PLD3 99 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 J3QQQ9 107 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 GAGE2EQ4V326 116 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 STPG4Q8N801 248 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 PLAC8Q9NZF1 115 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 GAGE2DQ9UEU5 116 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 NDUFA12Q9UI09 145 aa11.18□□□□□ -0.62
HLCS-205ENST00000448340 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
HLCS-205ENST00000448340 MYMXA0A1B0GTQ4 84 aa11.16□□□□□ -0.62
HLCS-205ENST00000448340 HERV-K104P63124 156 aa11.16□□□□□ -0.62
HLCS-205ENST00000448340 COX17Q14061 63 aa11.16□□□□□ -0.62
HLCS-205ENST00000448340 ERG28Q9UKR5 140 aa11.16□□□□□ -0.62
HLCS-205ENST00000448340 TMA7Q9Y2S6 64 aaKnown RBP11.16□□□□□ -0.62
HLCS-205ENST00000448340 LGALS3P17931 250 aaKnown RBP11.15□□□□□ -0.62
HLCS-205ENST00000448340 NMUP48645 174 aa11.15□□□□□ -0.62
HLCS-205ENST00000448340 PFN2P35080 140 aa11.14□□□□□ -0.63
HLCS-205ENST00000448340 A0A1W2PNN7 141 aa11.13□□□□□ -0.63
HLCS-205ENST00000448340 C9orf129Q5T035 196 aaKnown RBP11.13□□□□□ -0.63
HLCS-205ENST00000448340 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
HLCS-205ENST00000448340 LINC00587B1AMM8 73 aa11.12□□□□□ -0.63
HLCS-205ENST00000448340 FAM229AH3BQW9 127 aa11.11□□□□□ -0.63
HLCS-205ENST00000448340 XAGE1AQ9HD64 81 aa11.11□□□□□ -0.63
HLCS-205ENST00000448340 SCGB1D1O95968 90 aa11.1□□□□□ -0.63
HLCS-205ENST00000448340 LINC00158P58513 81 aa11.1□□□□□ -0.63
HLCS-205ENST00000448340 MEIG1Q5JSS6 88 aa11.1□□□□□ -0.63
HLCS-205ENST00000448340 HMCN2Q8NDA2 5059 aa11.1□□□□□ -0.63
HLCS-205ENST00000448340 UBR4Q5T4S7 5183 aa11.09□□□□□ -0.63
HLCS-205ENST00000448340 IGKV2D-26A0A0A0MRZ7 120 aa11.09□□□□□ -0.63
HLCS-205ENST00000448340 FAM168BA1KXE4 195 aa11.09□□□□□ -0.63
HLCS-205ENST00000448340 ANKRD39Q53RE8 183 aa11.09□□□□□ -0.63
HLCS-205ENST00000448340 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
HLCS-205ENST00000448340 J3QL48 77 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms