RNA–Protein interactions for RNA: ENST00000445866.6

SGCE-206, Transcript of sarcoglycan epsilon, humanhuman

TSL 5 BASIC

Gene SGCE, Length 1,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-206ENST00000445866 MAJINQ3KP22 176 aa11.33□□□□□ -0.6
SGCE-206ENST00000445866 NDUFA1O15239 70 aa11.33□□□□□ -0.6
SGCE-206ENST00000445866 KRTAP10-2P60368 255 aa11.33□□□□□ -0.6
SGCE-206ENST00000445866 CNBPP62633 177 aaKnown RBP11.33□□□□□ -0.6
SGCE-206ENST00000445866 PYY3Q5JQD4 70 aa11.33□□□□□ -0.6
SGCE-206ENST00000445866 C12orf57Q99622 126 aa11.33□□□□□ -0.6
SGCE-206ENST00000445866 J3QQQ9 107 aa11.32□□□□□ -0.6
SGCE-206ENST00000445866 C10orf25Q5T742 122 aa11.32□□□□□ -0.6
SGCE-206ENST00000445866 Q6ZRU5 148 aa11.32□□□□□ -0.6
SGCE-206ENST00000445866 IGLV5-52A0A0A0MRZ9 124 aa11.31□□□□□ -0.6
SGCE-206ENST00000445866 DNAH11Q96DT5 4516 aa11.31□□□□□ -0.6
SGCE-206ENST00000445866 LGALS3P17931 250 aaKnown RBP11.3□□□□□ -0.6
SGCE-206ENST00000445866 CXCL5P42830 114 aa11.3□□□□□ -0.6
SGCE-206ENST00000445866 ANKRD39Q53RE8 183 aa11.3□□□□□ -0.6
SGCE-206ENST00000445866 CARD19Q96LW7 228 aa11.3□□□□□ -0.6
SGCE-206ENST00000445866 TSPEAR-AS2P59090 65 aa11.3□□□□□ -0.6
SGCE-206ENST00000445866 NDUFA12Q9UI09 145 aa11.3□□□□□ -0.6
SGCE-206ENST00000445866 IGKV2D-26A0A0A0MRZ7 120 aa11.29□□□□□ -0.6
SGCE-206ENST00000445866 A0A1B0GVY2 172 aa11.29□□□□□ -0.6
SGCE-206ENST00000445866 NMUP48645 174 aa11.28□□□□□ -0.6
SGCE-206ENST00000445866 ZNF625Q96I27 306 aaPredicted RBP11.28□□□□□ -0.6
SGCE-206ENST00000445866 LINC01620Q4KN68 170 aa11.27□□□□□ -0.6
SGCE-206ENST00000445866 C9orf163Q8N9P6 203 aa11.27□□□□□ -0.6
SGCE-206ENST00000445866 C6orf48Q9UBA6 75 aa11.27□□□□□ -0.6
SGCE-206ENST00000445866 MYMXA0A1B0GTQ4 84 aa11.27□□□□□ -0.61
SGCE-206ENST00000445866 RNF151Q2KHN1 245 aa11.27□□□□□ -0.61
SGCE-206ENST00000445866 C9orf116Q5BN46 136 aaPredicted RBP11.27□□□□□ -0.61
SGCE-206ENST00000445866 TRBV30A0A0K0K1B3 111 aa11.26□□□□□ -0.61
SGCE-206ENST00000445866 CDPF1Q6NVV7 123 aa11.26□□□□□ -0.61
SGCE-206ENST00000445866 SFTA2Q6UW10 78 aa11.26□□□□□ -0.61
SGCE-206ENST00000445866 VAMP8Q9BV40 100 aa11.26□□□□□ -0.61
SGCE-206ENST00000445866 PKD1P98161 4303 aa11.25□□□□□ -0.61
SGCE-206ENST00000445866 PAM16Q9Y3D7 125 aa11.25□□□□□ -0.61
SGCE-206ENST00000445866 HECTD4Q9Y4D8 3996 aa11.24□□□□□ -0.61
SGCE-206ENST00000445866 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
SGCE-206ENST00000445866 GCSHP23434 173 aa11.24□□□□□ -0.61
SGCE-206ENST00000445866 HERV-K104P63124 156 aa11.24□□□□□ -0.61
SGCE-206ENST00000445866 ZNF815PA8K554 130 aa11.23□□□□□ -0.61
SGCE-206ENST00000445866 SPATA45Q537H7 98 aa11.23□□□□□ -0.61
SGCE-206ENST00000445866 PCP2Q8IVA1 136 aa11.23□□□□□ -0.61
SGCE-206ENST00000445866 SDIM1Q6ZPB5 146 aa11.22□□□□□ -0.61
SGCE-206ENST00000445866 PFN2P35080 140 aa11.21□□□□□ -0.61
SGCE-206ENST00000445866 LOC107984640A0A0U1RRK4 108 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 C16orf90A8MZG2 172 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 ERG28Q9UKR5 140 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 PCP4L1A6NKN8 68 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 LINC00158P58513 81 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 MEIG1Q5JSS6 88 aa11.2□□□□□ -0.62
SGCE-206ENST00000445866 A0A0U1RRA0 63 aa11.19□□□□□ -0.62
SGCE-206ENST00000445866 LINC00587B1AMM8 73 aa11.19□□□□□ -0.62
SGCE-206ENST00000445866 NDUFC2-KCTD14E9PQ53 114 aa11.19□□□□□ -0.62
SGCE-206ENST00000445866 RPL18AQ02543 176 aaKnown RBP11.19□□□□□ -0.62
SGCE-206ENST00000445866 GAGE2BQ13066 116 aa11.19□□□□□ -0.62
SGCE-206ENST00000445866 SMIM13P0DJ93 91 aa11.18□□□□□ -0.62
SGCE-206ENST00000445866 DPH3Q96FX2 82 aa11.18□□□□□ -0.62
SGCE-206ENST00000445866 C14orf144Q96I85 54 aa11.18□□□□□ -0.62
SGCE-206ENST00000445866 A0A0J9YXY3 114 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 TLX1NBP0CAT3 122 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 KRTAP10-1P60331 282 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 COX17Q14061 63 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 GAGE2EQ4V326 116 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 Q6ZRP5 223 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 GAGE2DQ9UEU5 116 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 CTAG1AP78358 180 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 CIRBPQ14011 172 aaKnown RBP11.17□□□□□ -0.62
SGCE-206ENST00000445866 SCGB1D4Q6XE38 83 aa11.17□□□□□ -0.62
SGCE-206ENST00000445866 IGKV2-24A0A0C4DH68 120 aa11.16□□□□□ -0.62
SGCE-206ENST00000445866 COX8AP10176 69 aa11.16□□□□□ -0.62
SGCE-206ENST00000445866 DNAH5Q8TE73 4624 aa11.15□□□□□ -0.62
SGCE-206ENST00000445866 A0A096LNI7 61 aa11.14□□□□□ -0.63
SGCE-206ENST00000445866 PTTG1IPP53801 180 aa11.14□□□□□ -0.63
SGCE-206ENST00000445866 BOD1L2Q8IYS8 172 aa11.14□□□□□ -0.63
SGCE-206ENST00000445866 CHTF8P0CG12 524 aa11.13□□□□□ -0.63
SGCE-206ENST00000445866 XAGE1AQ9HD64 81 aa11.13□□□□□ -0.63
SGCE-206ENST00000445866 PKHD1P08F94 4074 aa11.12□□□□□ -0.63
SGCE-206ENST00000445866 SLC25A34Q6PIV7 304 aa11.12□□□□□ -0.63
SGCE-206ENST00000445866 MIR7-3HGQ8N6C7 128 aa11.12□□□□□ -0.63
SGCE-206ENST00000445866 LINC00474Q9P2X8 69 aa11.12□□□□□ -0.63
SGCE-206ENST00000445866 DLEU1O43261 78 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 ADAMTSL4-AS1Q5T5F5 129 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 DAND5Q8N907 189 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 FAM30AQ9NZY2 134 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 PANO1I0J062 215 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 TIMM17BO60830 172 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 SND1-IT1Q9HBX3 110 aa11.11□□□□□ -0.63
SGCE-206ENST00000445866 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.11□□□□□ -0.63
SGCE-206ENST00000445866 TP73-AS1Q9UF72 201 aa11.1□□□□□ -0.63
SGCE-206ENST00000445866 DYNC1H1Q14204 4646 aaKnown RBP11.09□□□□□ -0.63
SGCE-206ENST00000445866 LRP1BQ9NZR2 4599 aa11.08□□□□□ -0.64
SGCE-206ENST00000445866 C9orf129Q5T035 196 aaKnown RBP11.08□□□□□ -0.64
SGCE-206ENST00000445866 LITAFQ99732 161 aa11.08□□□□□ -0.64
SGCE-206ENST00000445866 TMEM238C9JI98 176 aa11.07□□□□□ -0.64
SGCE-206ENST00000445866 SPACA4Q8TDM5 124 aa11.07□□□□□ -0.64
SGCE-206ENST00000445866 PRO1933Q9H354 126 aa11.06□□□□□ -0.64
SGCE-206ENST00000445866 NPC2P61916 151 aa11.05□□□□□ -0.64
SGCE-206ENST00000445866 SRSF9Q13242 221 aaKnown RBP eCLIP11.05□□□□□ -0.64
SGCE-206ENST00000445866 Q6ZSA8 131 aa11.05□□□□□ -0.64
SGCE-206ENST00000445866 A0A087WYN8 130 aa11.04□□□□□ -0.64
SGCE-206ENST00000445866 A0A1W2PNN7 141 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms