RNA–Protein interactions for RNA: ENST00000440447.2

PTX4-202, Transcript of pentraxin 4, humanhuman

TSL 5 BASIC

Gene PTX4, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTX4-202ENST00000440447 DPH3Q96FX2 82 aa11.69□□□□□ -0.54
PTX4-202ENST00000440447 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.69□□□□□ -0.54
PTX4-202ENST00000440447 HERC2O95714 4834 aa11.69□□□□□ -0.54
PTX4-202ENST00000440447 LOC107984640A0A0U1RRK4 108 aa11.68□□□□□ -0.54
PTX4-202ENST00000440447 COX7B2Q8TF08 81 aa11.68□□□□□ -0.54
PTX4-202ENST00000440447 MAP1LC3CQ9BXW4 147 aa11.68□□□□□ -0.54
PTX4-202ENST00000440447 IGKV2-24A0A0C4DH68 120 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 TRBV30A0A0K0K1B3 111 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 PANO1I0J062 215 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 CHTF8P0CG12 524 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 ODF1Q14990 250 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 CIRBP-AS1Q8TBR5 109 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 C6orf48Q9UBA6 75 aa11.67□□□□□ -0.54
PTX4-202ENST00000440447 A0A096LNI7 61 aa11.66□□□□□ -0.54
PTX4-202ENST00000440447 CXCL5P42830 114 aa11.66□□□□□ -0.54
PTX4-202ENST00000440447 CIRBPQ14011 172 aaKnown RBP11.66□□□□□ -0.54
PTX4-202ENST00000440447 LINC00474Q9P2X8 69 aa11.66□□□□□ -0.54
PTX4-202ENST00000440447 GAGE2BQ13066 116 aa11.65□□□□□ -0.54
PTX4-202ENST00000440447 MAJINQ3KP22 176 aa11.65□□□□□ -0.54
PTX4-202ENST00000440447 SPACA4Q8TDM5 124 aa11.65□□□□□ -0.54
PTX4-202ENST00000440447 IGLV5-39A0A0G2JS06 123 aa11.64□□□□□ -0.55
PTX4-202ENST00000440447 SMR3BP02814 79 aaPredicted RBP11.64□□□□□ -0.55
PTX4-202ENST00000440447 RPL18AQ02543 176 aaKnown RBP11.64□□□□□ -0.55
PTX4-202ENST00000440447 PTTG1IPP53801 180 aa11.63□□□□□ -0.55
PTX4-202ENST00000440447 Q8N1X5 172 aa11.63□□□□□ -0.55
PTX4-202ENST00000440447 TLX1NBP0CAT3 122 aa11.62□□□□□ -0.55
PTX4-202ENST00000440447 PLNP26678 52 aa11.62□□□□□ -0.55
PTX4-202ENST00000440447 A0A087WYN8 130 aa11.61□□□□□ -0.55
PTX4-202ENST00000440447 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
PTX4-202ENST00000440447 DPM2O94777 84 aa11.61□□□□□ -0.55
PTX4-202ENST00000440447 SYS1-DBNDD2H3BUS1 97 aa11.6□□□□□ -0.55
PTX4-202ENST00000440447 C9orf116Q5BN46 136 aaPredicted RBP11.6□□□□□ -0.55
PTX4-202ENST00000440447 STPG4Q8N801 248 aa11.6□□□□□ -0.55
PTX4-202ENST00000440447 PMCHL2Q9BQD1 86 aa11.6□□□□□ -0.55
PTX4-202ENST00000440447 Q6ZRP5 223 aa11.59□□□□□ -0.55
PTX4-202ENST00000440447 PLAC8Q9NZF1 115 aa11.59□□□□□ -0.55
PTX4-202ENST00000440447 NDUFC2-KCTD14E9PQ53 114 aa11.58□□□□□ -0.56
PTX4-202ENST00000440447 FAM229AH3BQW9 127 aa11.58□□□□□ -0.56
PTX4-202ENST00000440447 IGKCP01834 107 aa11.58□□□□□ -0.56
PTX4-202ENST00000440447 S100A6P06703 90 aa11.58□□□□□ -0.56
PTX4-202ENST00000440447 KRTAP17-1Q9BYP8 105 aa11.58□□□□□ -0.56
PTX4-202ENST00000440447 EPM2AB3EWF7 344 aa11.57□□□□□ -0.56
PTX4-202ENST00000440447 GAGE2EQ4V326 116 aa11.57□□□□□ -0.56
PTX4-202ENST00000440447 PET117Q6UWS5 81 aa11.57□□□□□ -0.56
PTX4-202ENST00000440447 LINC00528Q8N1L1 170 aa11.57□□□□□ -0.56
PTX4-202ENST00000440447 GAGE2DQ9UEU5 116 aa11.57□□□□□ -0.56
PTX4-202ENST00000440447 C3orf79P0CE67 100 aa11.56□□□□□ -0.56
PTX4-202ENST00000440447 FAT1Q14517 4588 aa11.55□□□□□ -0.56
PTX4-202ENST00000440447 KRTDAPP60985 99 aa11.55□□□□□ -0.56
PTX4-202ENST00000440447 Q5VSD8 79 aa11.55□□□□□ -0.56
PTX4-202ENST00000440447 SFTA2Q6UW10 78 aa11.55□□□□□ -0.56
PTX4-202ENST00000440447 S100A2P29034 98 aa11.54□□□□□ -0.56
PTX4-202ENST00000440447 HERVK_113P61574 105 aa11.54□□□□□ -0.56
PTX4-202ENST00000440447 LINC01545Q5VT33 79 aa11.54□□□□□ -0.56
PTX4-202ENST00000440447 HIST3H2BBQ8N257 126 aa11.53□□□□□ -0.56
PTX4-202ENST00000440447 A0A1W2PNN7 141 aa11.51□□□□□ -0.57
PTX4-202ENST00000440447 ZNF625Q96I27 306 aaPredicted RBP11.51□□□□□ -0.57
PTX4-202ENST00000440447 C20orf202A1L168 122 aa11.5□□□□□ -0.57
PTX4-202ENST00000440447 LEPROTO15243 131 aa11.5□□□□□ -0.57
PTX4-202ENST00000440447 PLA2G1BP04054 148 aaKnown RBP11.5□□□□□ -0.57
PTX4-202ENST00000440447 C7orf33Q8WU49 177 aa11.5□□□□□ -0.57
PTX4-202ENST00000440447 PLEKHB2Q96CS7 222 aa11.5□□□□□ -0.57
PTX4-202ENST00000440447 KRTAP4-5Q9BYR2 181 aa11.5□□□□□ -0.57
PTX4-202ENST00000440447 PFN2P35080 140 aa11.49□□□□□ -0.57
PTX4-202ENST00000440447 SNRPEP62304 92 aaKnown RBP11.49□□□□□ -0.57
PTX4-202ENST00000440447 HIST1H2BLQ99880 126 aa11.49□□□□□ -0.57
PTX4-202ENST00000440447 ERG28Q9UKR5 140 aa11.49□□□□□ -0.57
PTX4-202ENST00000440447 C9orf129Q5T035 196 aaKnown RBP11.48□□□□□ -0.57
PTX4-202ENST00000440447 XAGE1AQ9HD64 81 aa11.48□□□□□ -0.57
PTX4-202ENST00000440447 NDUFA12Q9UI09 145 aa11.48□□□□□ -0.57
PTX4-202ENST00000440447 FAM168BA1KXE4 195 aa11.47□□□□□ -0.57
PTX4-202ENST00000440447 RPL37AP61513 92 aaKnown RBP11.47□□□□□ -0.57
PTX4-202ENST00000440447 COX17Q14061 63 aa11.47□□□□□ -0.57
PTX4-202ENST00000440447 MYMXA0A1B0GTQ4 84 aa11.46□□□□□ -0.57
PTX4-202ENST00000440447 J3QQQ9 107 aa11.46□□□□□ -0.57
PTX4-202ENST00000440447 HERV-K104P63124 156 aa11.46□□□□□ -0.57
PTX4-202ENST00000440447 FAM19A5Q7Z5A7 132 aaPredicted RBP11.46□□□□□ -0.57
PTX4-202ENST00000440447 E9PLD3 99 aa11.45□□□□□ -0.58
PTX4-202ENST00000440447 LGALS3P17931 250 aaKnown RBP11.45□□□□□ -0.58
PTX4-202ENST00000440447 TSPEAR-AS2P59090 65 aa11.45□□□□□ -0.58
PTX4-202ENST00000440447 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
PTX4-202ENST00000440447 AKR1D1P51857 326 aa11.44□□□□□ -0.58
PTX4-202ENST00000440447 LINC00587B1AMM8 73 aa11.43□□□□□ -0.58
PTX4-202ENST00000440447 NMUP48645 174 aa11.43□□□□□ -0.58
PTX4-202ENST00000440447 LINC00158P58513 81 aa11.43□□□□□ -0.58
PTX4-202ENST00000440447 MEIG1Q5JSS6 88 aa11.43□□□□□ -0.58
PTX4-202ENST00000440447 PHF5AQ7RTV0 110 aaKnown RBP11.43□□□□□ -0.58
PTX4-202ENST00000440447 VPS13BQ7Z7G8 4022 aa11.43□□□□□ -0.58
PTX4-202ENST00000440447 A0A0U1RRA0 63 aa11.41□□□□□ -0.58
PTX4-202ENST00000440447 M0QXV9 152 aa11.41□□□□□ -0.58
PTX4-202ENST00000440447 KRTAP7-1Q8IUC3 87 aa11.41□□□□□ -0.58
PTX4-202ENST00000440447 SMIM13P0DJ93 91 aa11.4□□□□□ -0.58
PTX4-202ENST00000440447 SERTAD4-AS1Q5TG53 156 aa11.4□□□□□ -0.58
PTX4-202ENST00000440447 SND1-IT1Q9HBX3 110 aa11.4□□□□□ -0.58
PTX4-202ENST00000440447 INAFM2P0DMQ5 153 aa11.39□□□□□ -0.59
PTX4-202ENST00000440447 KRTAP10-4P60372 401 aaPredicted RBP11.39□□□□□ -0.59
PTX4-202ENST00000440447 ATOH7Q8N100 152 aa11.39□□□□□ -0.59
PTX4-202ENST00000440447 PLA2G2DQ9UNK4 145 aa11.39□□□□□ -0.59
PTX4-202ENST00000440447 C22orf24Q9Y442 160 aa11.38□□□□□ -0.59
PTX4-202ENST00000440447 ABCA13Q86UQ4 5058 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms