RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 NDUFC2-KCTD14E9PQ53 114 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 H3BRM9 83 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 GAGE2EQ4V326 116 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 PDZD11Q5EBL8 140 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 C2orf82Q6UX34 121 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 GAGE2DQ9UEU5 116 aa6.56□□□□□ -1.36
MCF2L-216ENST00000439475 F8VRH5 84 aa6.54□□□□□ -1.36
MCF2L-216ENST00000439475 CHCHD1Q96BP2 118 aaKnown RBP6.54□□□□□ -1.36
MCF2L-216ENST00000439475 URB1-AS1Q96HZ7 61 aa6.54□□□□□ -1.36
MCF2L-216ENST00000439475 IGLV5-45A0A087WSX0 123 aa6.53□□□□□ -1.36
MCF2L-216ENST00000439475 HNRNPA3P51991 378 aaKnown RBP6.53□□□□□ -1.36
MCF2L-216ENST00000439475 PRR3P79522 188 aaKnown RBP6.53□□□□□ -1.36
MCF2L-216ENST00000439475 SLC7A5P1Q8MH63 180 aa6.53□□□□□ -1.36
MCF2L-216ENST00000439475 COX7B2Q8TF08 81 aa6.53□□□□□ -1.36
MCF2L-216ENST00000439475 YPEL4Q96NS1 127 aa6.53□□□□□ -1.36
MCF2L-216ENST00000439475 A0A096LNJ9 63 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 SMIM1B2RUZ4 78 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 HSBP1O75506 76 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 IGLC3P0DOY3 106 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 BAGE3Q86Y29 109 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 CBLN2Q8IUK8 224 aa6.52□□□□□ -1.37
MCF2L-216ENST00000439475 SPINK8P0C7L1 97 aa6.51□□□□□ -1.37
MCF2L-216ENST00000439475 PMCHL1Q16048 86 aa6.51□□□□□ -1.37
MCF2L-216ENST00000439475 PHF5AQ7RTV0 110 aaKnown RBP6.51□□□□□ -1.37
MCF2L-216ENST00000439475 TRGC2P03986 189 aa6.5□□□□□ -1.37
MCF2L-216ENST00000439475 UBE2BP63146 152 aa6.5□□□□□ -1.37
MCF2L-216ENST00000439475 REG3GQ6UW15 175 aa6.5□□□□□ -1.37
MCF2L-216ENST00000439475 FAM19A5Q7Z5A7 132 aaPredicted RBP6.5□□□□□ -1.37
MCF2L-216ENST00000439475 C1orf137Q5JT78 98 aa6.49□□□□□ -1.37
MCF2L-216ENST00000439475 TMEM170BQ5T4T1 132 aa6.49□□□□□ -1.37
MCF2L-216ENST00000439475 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
MCF2L-216ENST00000439475 PSORS1C2Q9UIG4 136 aa6.49□□□□□ -1.37
MCF2L-216ENST00000439475 CHTOPQ9Y3Y2 248 aaKnown RBP6.49□□□□□ -1.37
MCF2L-216ENST00000439475 FAM168BA1KXE4 195 aa6.48□□□□□ -1.37
MCF2L-216ENST00000439475 M0QXV9 152 aa6.48□□□□□ -1.37
MCF2L-216ENST00000439475 ZNF22P17026 224 aaPredicted RBP6.48□□□□□ -1.37
MCF2L-216ENST00000439475 LBHQ53QV2 105 aaPredicted RBP6.48□□□□□ -1.37
MCF2L-216ENST00000439475 C9orf129Q5T035 196 aaKnown RBP6.48□□□□□ -1.37
MCF2L-216ENST00000439475 SERTAD4-AS1Q5TG53 156 aa6.48□□□□□ -1.37
MCF2L-216ENST00000439475 SFTA2Q6UW10 78 aa6.48□□□□□ -1.37
MCF2L-216ENST00000439475 TRAV12-1A0A0B4J245 112 aa6.47□□□□□ -1.37
MCF2L-216ENST00000439475 SRSF9Q13242 221 aaKnown RBP eCLIP6.47□□□□□ -1.37
MCF2L-216ENST00000439475 XAGE1AQ9HD64 81 aa6.47□□□□□ -1.37
MCF2L-216ENST00000439475 IGLV5-39A0A0G2JS06 123 aa6.46□□□□□ -1.38
MCF2L-216ENST00000439475 C11orf86A6NJI1 115 aa6.46□□□□□ -1.38
MCF2L-216ENST00000439475 LEPROTL1O95214 131 aa6.46□□□□□ -1.38
MCF2L-216ENST00000439475 SRRM2Q9UQ35 2752 aaKnown RBP6.46□□□□□ -1.38
MCF2L-216ENST00000439475 C22orf24Q9Y442 160 aa6.46□□□□□ -1.38
MCF2L-216ENST00000439475 MYCBP2O75592 4640 aa6.45□□□□□ -1.38
MCF2L-216ENST00000439475 COLCA2A8K830 154 aa6.45□□□□□ -1.38
MCF2L-216ENST00000439475 IGLV7-43P04211 117 aa6.45□□□□□ -1.38
MCF2L-216ENST00000439475 ODF1Q14990 250 aa6.45□□□□□ -1.38
MCF2L-216ENST00000439475 FAM19A2Q8N3H0 131 aa6.45□□□□□ -1.38
MCF2L-216ENST00000439475 NUPR1O60356 82 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 PFN2P35080 140 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 COX17Q14061 63 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 DIRC1Q969H9 104 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 LINC01600Q96MT4 127 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 TP73-AS1Q9UF72 201 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 HSPB8Q9UJY1 196 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
MCF2L-216ENST00000439475 DMBT1Q9UGM3 2413 aaPredicted RBP6.44□□□□□ -1.38
MCF2L-216ENST00000439475 SERF1AO75920 110 aa6.43□□□□□ -1.38
MCF2L-216ENST00000439475 MRPL55Q7Z7F7 128 aaKnown RBP6.43□□□□□ -1.38
MCF2L-216ENST00000439475 KRTAP7-1Q8IUC3 87 aa6.43□□□□□ -1.38
MCF2L-216ENST00000439475 TMEM223A0PJW6 202 aa6.42□□□□□ -1.38
MCF2L-216ENST00000439475 RPL24P83731 157 aaKnown RBP6.42□□□□□ -1.38
MCF2L-216ENST00000439475 NKAPP1Q8N9T2 125 aa6.42□□□□□ -1.38
MCF2L-216ENST00000439475 ERG28Q9UKR5 140 aa6.42□□□□□ -1.38
MCF2L-216ENST00000439475 PKHD1L1Q86WI1 4243 aa6.42□□□□□ -1.38
MCF2L-216ENST00000439475 FAT3Q8TDW7 4589 aa6.42□□□□□ -1.38
MCF2L-216ENST00000439475 LINC00587B1AMM8 73 aa6.41□□□□□ -1.38
MCF2L-216ENST00000439475 H0Y8G0 127 aa6.41□□□□□ -1.38
MCF2L-216ENST00000439475 ATP6V1G1O75348 118 aa6.41□□□□□ -1.38
MCF2L-216ENST00000439475 ZNF625Q96I27 306 aaPredicted RBP6.41□□□□□ -1.38
MCF2L-216ENST00000439475 MT1HL1P0DM35 61 aa6.4□□□□□ -1.38
MCF2L-216ENST00000439475 FABP4P15090 132 aa6.4□□□□□ -1.38
MCF2L-216ENST00000439475 LINC00158P58513 81 aa6.4□□□□□ -1.38
MCF2L-216ENST00000439475 KRTAP11-1Q8IUC1 163 aa6.4□□□□□ -1.38
MCF2L-216ENST00000439475 LRP1Q07954 4544 aaKnown RBP6.4□□□□□ -1.39
MCF2L-216ENST00000439475 IGLV5-37A0A075B6J1 123 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 HERVK_113P61574 105 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 HERV-K104P63124 156 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 MEIG1Q5JSS6 88 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 LINC00167Q96N53 147 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
MCF2L-216ENST00000439475 H0Y9J4 135 aa6.38□□□□□ -1.39
MCF2L-216ENST00000439475 ZNF861PO60384 105 aa6.38□□□□□ -1.39
MCF2L-216ENST00000439475 PLNP26678 52 aa6.38□□□□□ -1.39
MCF2L-216ENST00000439475 SND1-IT1Q9HBX3 110 aa6.38□□□□□ -1.39
MCF2L-216ENST00000439475 MYMXA0A1B0GTQ4 84 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 SCO1O75880 301 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 DPM2O94777 84 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 RPL28P46779 137 aaKnown RBP6.37□□□□□ -1.39
MCF2L-216ENST00000439475 LINC00310P59036 64 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 KRTAP10-8P60410 259 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 PLEKHB2Q96CS7 222 aa6.37□□□□□ -1.39
MCF2L-216ENST00000439475 GAGE10A6NGK3 116 aa6.36□□□□□ -1.39
MCF2L-216ENST00000439475 RPL37AP8A6NKH3 93 aa6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms