RNA–Protein interactions for RNA: ENST00000438862.6

CSTF3-203, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 1 (best) BASIC

Gene CSTF3, Length 1,132 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-203ENST00000438862 PRR34Q9NV39 138 aa6.95□□□□□ -1.3
CSTF3-203ENST00000438862 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.94□□□□□ -1.3
CSTF3-203ENST00000438862 LEPROTL1O95214 131 aa6.94□□□□□ -1.3
CSTF3-203ENST00000438862 SRSF9Q13242 221 aaKnown RBP eCLIP6.94□□□□□ -1.3
CSTF3-203ENST00000438862 Q6ZN92 141 aa6.94□□□□□ -1.3
CSTF3-203ENST00000438862 HSPB8Q9UJY1 196 aa6.94□□□□□ -1.3
CSTF3-203ENST00000438862 IGLV4-60A0A075B6I1 120 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 TRAV8-4A0A0B4J246 113 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 C5orf52A6NGY3 159 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 ANGP03950 147 aaKnown RBP6.93□□□□□ -1.3
CSTF3-203ENST00000438862 FAM19A2Q8N3H0 131 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 AMELXQ99217 191 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 VCX2Q9H322 139 aa6.93□□□□□ -1.3
CSTF3-203ENST00000438862 IGLV4-3A0A075B6K6 122 aa6.92□□□□□ -1.3
CSTF3-203ENST00000438862 hDV102S1A0JD36 115 aa6.92□□□□□ -1.3
CSTF3-203ENST00000438862 TEX43Q6ZNM6 134 aa6.92□□□□□ -1.3
CSTF3-203ENST00000438862 FAM104AQ969W3 186 aa6.92□□□□□ -1.3
CSTF3-203ENST00000438862 SEC11AP67812 179 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 REG3AQ06141 175 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 PMVKQ15126 192 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 PMCHL1Q16048 86 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 KRTAP26-1Q6PEX3 210 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 HIST3H2BBQ8N257 126 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 LINC00269Q8N2A0 174 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 C2orf88Q9BSF0 95 aa6.91□□□□□ -1.3
CSTF3-203ENST00000438862 TRAV12-1A0A0B4J245 112 aa6.9□□□□□ -1.3
CSTF3-203ENST00000438862 S100A2P29034 98 aa6.9□□□□□ -1.3
CSTF3-203ENST00000438862 SNRPEP62304 92 aaKnown RBP6.9□□□□□ -1.3
CSTF3-203ENST00000438862 Q6ZUT4 128 aa6.9□□□□□ -1.3
CSTF3-203ENST00000438862 FAM19A3Q7Z5A8 133 aa6.9□□□□□ -1.3
CSTF3-203ENST00000438862 LINC00959A0A1B0GUT2 108 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 SS18Q15532 418 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 Q6ZRP5 223 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 MAP1LC3CQ9BXW4 147 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 CST9LQ9H4G1 147 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 CRCT1Q9UGL9 99 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 PSORS1C2Q9UIG4 136 aa6.89□□□□□ -1.31
CSTF3-203ENST00000438862 IFITM10A6NMD0 228 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 FABP4P15090 132 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 AKR1D1P51857 326 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 MAJINQ3KP22 176 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 LINC00173Q6ZV60 143 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 STPG4Q8N801 248 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 HIST1H2BLQ99880 126 aa6.88□□□□□ -1.31
CSTF3-203ENST00000438862 OPRPNQ99935 248 aaPredicted RBP6.88□□□□□ -1.31
CSTF3-203ENST00000438862 UBE2D1P51668 147 aa6.87□□□□□ -1.31
CSTF3-203ENST00000438862 COX6A2Q02221 97 aa6.87□□□□□ -1.31
CSTF3-203ENST00000438862 PET117Q6UWS5 81 aa6.87□□□□□ -1.31
CSTF3-203ENST00000438862 SYS1-DBNDD2H3BUS1 97 aa6.86□□□□□ -1.31
CSTF3-203ENST00000438862 HERVK_113P63121 156 aa6.86□□□□□ -1.31
CSTF3-203ENST00000438862 CD164L2Q6UWJ8 174 aa6.86□□□□□ -1.31
CSTF3-203ENST00000438862 LINC01561Q8N1V8 128 aa6.86□□□□□ -1.31
CSTF3-203ENST00000438862 IGLV10-54A0A075B6I4 117 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 TRAV13-1A0A0B4J241 112 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 TINCRA0A1B0GVN0 87 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 F8VRH5 84 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 PRR4Q16378 134 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 LINC00242Q5T6M2 205 aa6.85□□□□□ -1.31
CSTF3-203ENST00000438862 CHCHD10Q8WYQ3 142 aaPredicted RBP6.85□□□□□ -1.31
CSTF3-203ENST00000438862 TMA7Q9Y2S6 64 aaKnown RBP6.85□□□□□ -1.31
CSTF3-203ENST00000438862 IGLV5-45A0A087WSX0 123 aa6.84□□□□□ -1.31
CSTF3-203ENST00000438862 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
CSTF3-203ENST00000438862 IGKV2-24A0A0C4DH68 120 aa6.84□□□□□ -1.31
CSTF3-203ENST00000438862 IGLC3P0DOY3 106 aa6.84□□□□□ -1.31
CSTF3-203ENST00000438862 RNASE13Q5GAN3 156 aaKnown RBP6.84□□□□□ -1.31
CSTF3-203ENST00000438862 CLPSL2Q6UWE3 100 aa6.84□□□□□ -1.31
CSTF3-203ENST00000438862 CHTOPQ9Y3Y2 248 aaKnown RBP6.84□□□□□ -1.31
CSTF3-203ENST00000438862 IGKV3OR2-268A0A0C4DH90 116 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 C20orf202A1L168 122 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 C3orf79P0CE67 100 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 PLNP26678 52 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 LINC01545Q5VT33 79 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 GEMIN7Q9H840 131 aaKnown RBP6.83□□□□□ -1.32
CSTF3-203ENST00000438862 LINC00474Q9P2X8 69 aa6.83□□□□□ -1.32
CSTF3-203ENST00000438862 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
CSTF3-203ENST00000438862 A0A087WZ39 114 aa6.82□□□□□ -1.32
CSTF3-203ENST00000438862 FOXI1Q12951 378 aa6.82□□□□□ -1.32
CSTF3-203ENST00000438862 ZC2HC1BQ5TFG8 222 aa6.82□□□□□ -1.32
CSTF3-203ENST00000438862 CFAP161Q6P656 301 aa6.82□□□□□ -1.32
CSTF3-203ENST00000438862 MRPL35Q9NZE8 188 aaKnown RBP6.82□□□□□ -1.32
CSTF3-203ENST00000438862 GAGE12HA6NDE8 117 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 C9orf118A6NHY6 69 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 H3BRM9 83 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 COX7A2LO14548 114 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 DPM2O94777 84 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 XCL1P47992 114 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 KRTDAPP60985 99 aa6.81□□□□□ -1.32
CSTF3-203ENST00000438862 APOMO95445 188 aa6.8□□□□□ -1.32
CSTF3-203ENST00000438862 PRR26Q8N8Z3 221 aa6.8□□□□□ -1.32
CSTF3-203ENST00000438862 OR10D4PQ8NGN7 298 aa6.8□□□□□ -1.32
CSTF3-203ENST00000438862 PKIGQ9Y2B9 76 aa6.8□□□□□ -1.32
CSTF3-203ENST00000438862 A0A096LNI7 61 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 IGHV1-58A0A0C4DH39 117 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 C11orf86A6NJI1 115 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 IGKCP01834 107 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 ZNF22P17026 224 aaPredicted RBP6.79□□□□□ -1.32
CSTF3-203ENST00000438862 LINC00469Q8N7U9 141 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 CDKN2A-AS1Q9UH64 79 aa6.79□□□□□ -1.32
CSTF3-203ENST00000438862 F8WDY8 70 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms