RNA–Protein interactions for RNA: ENST00000436354.2

UBXN1-203, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-203ENST00000436354 GAGE12HA6NDE8 117 aa11.48□□□□□ -0.57
UBXN1-203ENST00000436354 XCL1P47992 114 aa11.48□□□□□ -0.57
UBXN1-203ENST00000436354 REG3GQ6UW15 175 aa11.48□□□□□ -0.57
UBXN1-203ENST00000436354 STPG4Q8N801 248 aa11.48□□□□□ -0.57
UBXN1-203ENST00000436354 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
UBXN1-203ENST00000436354 SPINK6Q6UWN8 80 aa11.47□□□□□ -0.57
UBXN1-203ENST00000436354 S100A6P06703 90 aa11.46□□□□□ -0.57
UBXN1-203ENST00000436354 FABP4P15090 132 aa11.46□□□□□ -0.57
UBXN1-203ENST00000436354 SEC11AP67812 179 aa11.46□□□□□ -0.57
UBXN1-203ENST00000436354 HIST3H2BBQ8N257 126 aa11.46□□□□□ -0.57
UBXN1-203ENST00000436354 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
UBXN1-203ENST00000436354 IGLV4-69A0A075B6H9 119 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 IGLV5-45A0A087WSX0 123 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 C5orf52A6NGY3 159 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 IGLC3P0DOY3 106 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 HERVK_113P63121 156 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 HIGD2BQ4VC39 106 aa11.44□□□□□ -0.58
UBXN1-203ENST00000436354 A0A087WZ39 114 aa11.42□□□□□ -0.58
UBXN1-203ENST00000436354 A0A096LNI7 61 aa11.42□□□□□ -0.58
UBXN1-203ENST00000436354 COX7A2LO14548 114 aa11.42□□□□□ -0.58
UBXN1-203ENST00000436354 LINC01561Q8N1V8 128 aa11.42□□□□□ -0.58
UBXN1-203ENST00000436354 LINC00474Q9P2X8 69 aa11.42□□□□□ -0.58
UBXN1-203ENST00000436354 GVQW2A0A096LPI5 108 aaPredicted RBP11.41□□□□□ -0.58
UBXN1-203ENST00000436354 SNRPEP62304 92 aaKnown RBP11.41□□□□□ -0.58
UBXN1-203ENST00000436354 MAP1LC3CQ9BXW4 147 aa11.41□□□□□ -0.58
UBXN1-203ENST00000436354 PKIGQ9Y2B9 76 aa11.41□□□□□ -0.58
UBXN1-203ENST00000436354 CHTOPQ9Y3Y2 248 aaKnown RBP11.41□□□□□ -0.58
UBXN1-203ENST00000436354 F8VRH5 84 aa11.4□□□□□ -0.58
UBXN1-203ENST00000436354 SRSF9Q13242 221 aaKnown RBP eCLIP11.4□□□□□ -0.58
UBXN1-203ENST00000436354 HIST1H2BLQ99880 126 aa11.4□□□□□ -0.58
UBXN1-203ENST00000436354 GEMIN7Q9H840 131 aaKnown RBP11.4□□□□□ -0.58
UBXN1-203ENST00000436354 IGHV1-58A0A0C4DH39 117 aa11.39□□□□□ -0.59
UBXN1-203ENST00000436354 SYS1-DBNDD2H3BUS1 97 aa11.39□□□□□ -0.59
UBXN1-203ENST00000436354 Q6ZRP5 223 aa11.39□□□□□ -0.59
UBXN1-203ENST00000436354 C5orf38Q86SI9 138 aa11.39□□□□□ -0.59
UBXN1-203ENST00000436354 MRPL35Q9NZE8 188 aaKnown RBP11.39□□□□□ -0.59
UBXN1-203ENST00000436354 CDKN2A-AS1Q9UH64 79 aa11.39□□□□□ -0.59
UBXN1-203ENST00000436354 C3orf79P0CE67 100 aa11.38□□□□□ -0.59
UBXN1-203ENST00000436354 S100A2P29034 98 aa11.38□□□□□ -0.59
UBXN1-203ENST00000436354 C11orf86A6NJI1 115 aa11.37□□□□□ -0.59
UBXN1-203ENST00000436354 ZNF22P17026 224 aaPredicted RBP11.37□□□□□ -0.59
UBXN1-203ENST00000436354 PET117Q6UWS5 81 aa11.37□□□□□ -0.59
UBXN1-203ENST00000436354 LINC00469Q8N7U9 141 aa11.37□□□□□ -0.59
UBXN1-203ENST00000436354 H0Y8G0 127 aa11.36□□□□□ -0.59
UBXN1-203ENST00000436354 APOMO95445 188 aa11.36□□□□□ -0.59
UBXN1-203ENST00000436354 MALP21145 153 aa11.36□□□□□ -0.59
UBXN1-203ENST00000436354 LINC01545Q5VT33 79 aa11.36□□□□□ -0.59
UBXN1-203ENST00000436354 OR10D4PQ8NGN7 298 aa11.36□□□□□ -0.59
UBXN1-203ENST00000436354 SMIM1B2RUZ4 78 aa11.34□□□□□ -0.59
UBXN1-203ENST00000436354 PLNP26678 52 aa11.34□□□□□ -0.59
UBXN1-203ENST00000436354 TMA7Q9Y2S6 64 aaKnown RBP11.34□□□□□ -0.59
UBXN1-203ENST00000436354 H3BRM9 83 aa11.33□□□□□ -0.6
UBXN1-203ENST00000436354 KRTDAPP60985 99 aa11.33□□□□□ -0.6
UBXN1-203ENST00000436354 CARD19Q96LW7 228 aa11.33□□□□□ -0.6
UBXN1-203ENST00000436354 DPM2O94777 84 aa11.32□□□□□ -0.6
UBXN1-203ENST00000436354 ORAOV1Q8WV07 137 aa11.32□□□□□ -0.6
UBXN1-203ENST00000436354 IGLV5-39A0A0G2JS06 123 aa11.31□□□□□ -0.6
UBXN1-203ENST00000436354 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
UBXN1-203ENST00000436354 PMCHL2Q9BQD1 86 aa11.31□□□□□ -0.6
UBXN1-203ENST00000436354 IGKCP01834 107 aa11.3□□□□□ -0.6
UBXN1-203ENST00000436354 SPAG11BQ08648 103 aa11.3□□□□□ -0.6
UBXN1-203ENST00000436354 TMEM170BQ5T4T1 132 aa11.3□□□□□ -0.6
UBXN1-203ENST00000436354 Q8IZM0 81 aa11.3□□□□□ -0.6
UBXN1-203ENST00000436354 C2orf48Q96LS8 159 aa11.3□□□□□ -0.6
UBXN1-203ENST00000436354 TMEM223A0PJW6 202 aa11.29□□□□□ -0.6
UBXN1-203ENST00000436354 F8WDY8 70 aa11.29□□□□□ -0.6
UBXN1-203ENST00000436354 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
UBXN1-203ENST00000436354 SPINK8P0C7L1 97 aa11.29□□□□□ -0.6
UBXN1-203ENST00000436354 LINC00526Q96FQ7 95 aa11.29□□□□□ -0.6
UBXN1-203ENST00000436354 SYCNQ0VAF6 134 aa11.28□□□□□ -0.6
UBXN1-203ENST00000436354 C20orf202A1L168 122 aa11.27□□□□□ -0.61
UBXN1-203ENST00000436354 PTTG1IPP53801 180 aa11.27□□□□□ -0.61
UBXN1-203ENST00000436354 AKR1D1P51857 326 aa11.26□□□□□ -0.61
UBXN1-203ENST00000436354 COX7B2Q8TF08 81 aa11.25□□□□□ -0.61
UBXN1-203ENST00000436354 LOC107984640A0A0U1RRK4 108 aa11.24□□□□□ -0.61
UBXN1-203ENST00000436354 PRSS2P07478 247 aa11.24□□□□□ -0.61
UBXN1-203ENST00000436354 CXCL5P42830 114 aa11.24□□□□□ -0.61
UBXN1-203ENST00000436354 GAGE2BQ13066 116 aa11.24□□□□□ -0.61
UBXN1-203ENST00000436354 RNF151Q2KHN1 245 aa11.23□□□□□ -0.61
UBXN1-203ENST00000436354 CAMK2N2Q96S95 79 aa11.23□□□□□ -0.61
UBXN1-203ENST00000436354 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
UBXN1-203ENST00000436354 PSORS1C2Q9UIG4 136 aa11.23□□□□□ -0.61
UBXN1-203ENST00000436354 NDUFA1O15239 70 aa11.22□□□□□ -0.61
UBXN1-203ENST00000436354 A0A1W2PNN7 141 aa11.21□□□□□ -0.61
UBXN1-203ENST00000436354 HERVK_113P61574 105 aa11.21□□□□□ -0.61
UBXN1-203ENST00000436354 C6orf226Q5I0X4 101 aa11.21□□□□□ -0.61
UBXN1-203ENST00000436354 C2orf82Q6UX34 121 aa11.21□□□□□ -0.61
UBXN1-203ENST00000436354 LPAP08519 4548 aa11.21□□□□□ -0.62
UBXN1-203ENST00000436354 TRBV30A0A0K0K1B3 111 aa11.2□□□□□ -0.62
UBXN1-203ENST00000436354 C10orf25Q5T742 122 aa11.2□□□□□ -0.62
UBXN1-203ENST00000436354 E9PLD3 99 aa11.19□□□□□ -0.62
UBXN1-203ENST00000436354 LEPROTO15243 131 aa11.19□□□□□ -0.62
UBXN1-203ENST00000436354 CKS1BP61024 79 aa11.19□□□□□ -0.62
UBXN1-203ENST00000436354 C1orf137Q5JT78 98 aa11.19□□□□□ -0.62
UBXN1-203ENST00000436354 UNQ6190/PRO20217Q6UXQ8 127 aa11.19□□□□□ -0.62
UBXN1-203ENST00000436354 SFTA2Q6UW10 78 aa11.18□□□□□ -0.62
UBXN1-203ENST00000436354 PLEKHB2Q96CS7 222 aa11.18□□□□□ -0.62
UBXN1-203ENST00000436354 ZNF625Q96I27 306 aaPredicted RBP11.18□□□□□ -0.62
UBXN1-203ENST00000436354 C6orf48Q9UBA6 75 aa11.18□□□□□ -0.62
UBXN1-203ENST00000436354 TSPEAR-AS2P59090 65 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms