RNA–Protein interactions for RNA: ENST00000435455.5

SMPD4-207, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-207ENST00000435455 IGLV5-45A0A087WSX0 123 aa10.18□□□□□ -0.78
SMPD4-207ENST00000435455 KRTAP29-1A8MX34 341 aaPredicted RBP10.18□□□□□ -0.78
SMPD4-207ENST00000435455 A0A1W2PNN7 141 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 J3QL48 77 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 ATP5LO75964 103 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 C9orf116Q5BN46 136 aaPredicted RBP10.17□□□□□ -0.78
SMPD4-207ENST00000435455 PDZD11Q5EBL8 140 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 Q6ZRP5 223 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 PKHD1L1Q86WI1 4243 aa10.17□□□□□ -0.78
SMPD4-207ENST00000435455 SMIM1B2RUZ4 78 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 NDUFC2-KCTD14E9PQ53 114 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 OXTP01178 125 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 CXCL5P42830 114 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 HNRNPA3P51991 378 aaKnown RBP10.16□□□□□ -0.78
SMPD4-207ENST00000435455 NDUFA6P56556 154 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 PMCHL1Q16048 86 aa10.16□□□□□ -0.78
SMPD4-207ENST00000435455 CHCHD1Q96BP2 118 aaKnown RBP10.16□□□□□ -0.78
SMPD4-207ENST00000435455 PRR3P79522 188 aaKnown RBP10.15□□□□□ -0.78
SMPD4-207ENST00000435455 GAGE2EQ4V326 116 aa10.15□□□□□ -0.78
SMPD4-207ENST00000435455 GAGE2DQ9UEU5 116 aa10.15□□□□□ -0.78
SMPD4-207ENST00000435455 F8VRH5 84 aa10.14□□□□□ -0.79
SMPD4-207ENST00000435455 H3BRM9 83 aa10.14□□□□□ -0.79
SMPD4-207ENST00000435455 COX7B2Q8TF08 81 aa10.14□□□□□ -0.79
SMPD4-207ENST00000435455 HERC1Q15751 4861 aa10.13□□□□□ -0.79
SMPD4-207ENST00000435455 IGLC3P0DOY3 106 aa10.13□□□□□ -0.79
SMPD4-207ENST00000435455 BAGE3Q86Y29 109 aa10.12□□□□□ -0.79
SMPD4-207ENST00000435455 TRGC2P03986 189 aa10.11□□□□□ -0.79
SMPD4-207ENST00000435455 SPINK8P0C7L1 97 aa10.11□□□□□ -0.79
SMPD4-207ENST00000435455 LRP1Q07954 4544 aaKnown RBP10.11□□□□□ -0.79
SMPD4-207ENST00000435455 HSBP1O75506 76 aa10.09□□□□□ -0.79
SMPD4-207ENST00000435455 ZNF22P17026 224 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-207ENST00000435455 PHF5AQ7RTV0 110 aaKnown RBP10.09□□□□□ -0.79
SMPD4-207ENST00000435455 FAM19A5Q7Z5A7 132 aaPredicted RBP10.09□□□□□ -0.79
SMPD4-207ENST00000435455 FAT3Q8TDW7 4589 aa10.09□□□□□ -0.79
SMPD4-207ENST00000435455 FAM168BA1KXE4 195 aa10.08□□□□□ -0.8
SMPD4-207ENST00000435455 IFI27L1Q96BM0 104 aa10.08□□□□□ -0.8
SMPD4-207ENST00000435455 IGLV5-39A0A0G2JS06 123 aa10.07□□□□□ -0.8
SMPD4-207ENST00000435455 COLCA2A8K830 154 aa10.07□□□□□ -0.8
SMPD4-207ENST00000435455 C9orf129Q5T035 196 aaKnown RBP10.07□□□□□ -0.8
SMPD4-207ENST00000435455 TRAV12-1A0A0B4J245 112 aa10.06□□□□□ -0.8
SMPD4-207ENST00000435455 C11orf86A6NJI1 115 aa10.06□□□□□ -0.8
SMPD4-207ENST00000435455 PSORS1C2Q9UIG4 136 aa10.06□□□□□ -0.8
SMPD4-207ENST00000435455 CHTOPQ9Y3Y2 248 aaKnown RBP10.06□□□□□ -0.8
SMPD4-207ENST00000435455 M0QXV9 152 aa10.05□□□□□ -0.8
SMPD4-207ENST00000435455 TMEM170BQ5T4T1 132 aa10.05□□□□□ -0.8
SMPD4-207ENST00000435455 SERF1AO75920 110 aa10.04□□□□□ -0.8
SMPD4-207ENST00000435455 SPINK6Q6UWN8 80 aa10.04□□□□□ -0.8
SMPD4-207ENST00000435455 KRTAP7-1Q8IUC3 87 aa10.04□□□□□ -0.8
SMPD4-207ENST00000435455 FAM19A2Q8N3H0 131 aa10.04□□□□□ -0.8
SMPD4-207ENST00000435455 XAGE1AQ9HD64 81 aa10.03□□□□□ -0.8
SMPD4-207ENST00000435455 UBE2BP63146 152 aa10.02□□□□□ -0.81
SMPD4-207ENST00000435455 SRSF9Q13242 221 aaKnown RBP eCLIP10.02□□□□□ -0.81
SMPD4-207ENST00000435455 ODF1Q14990 250 aa10.02□□□□□ -0.81
SMPD4-207ENST00000435455 LEPROTL1O95214 131 aa10.01□□□□□ -0.81
SMPD4-207ENST00000435455 LINC00310P59036 64 aa10.01□□□□□ -0.81
SMPD4-207ENST00000435455 C1orf137Q5JT78 98 aa10.01□□□□□ -0.81
SMPD4-207ENST00000435455 SFTA2Q6UW10 78 aa10.01□□□□□ -0.81
SMPD4-207ENST00000435455 REG3GQ6UW15 175 aa10□□□□□ -0.81
SMPD4-207ENST00000435455 LBHQ53QV2 105 aaPredicted RBP9.99□□□□□ -0.81
SMPD4-207ENST00000435455 SERTAD4-AS1Q5TG53 156 aa9.99□□□□□ -0.81
SMPD4-207ENST00000435455 TP73-AS1Q9UF72 201 aa9.99□□□□□ -0.81
SMPD4-207ENST00000435455 SCO1O75880 301 aa9.98□□□□□ -0.81
SMPD4-207ENST00000435455 HSPB8Q9UJY1 196 aa9.98□□□□□ -0.81
SMPD4-207ENST00000435455 C22orf24Q9Y442 160 aa9.98□□□□□ -0.81
SMPD4-207ENST00000435455 TMEM223A0PJW6 202 aa9.97□□□□□ -0.81
SMPD4-207ENST00000435455 IGLV7-43P04211 117 aa9.97□□□□□ -0.81
SMPD4-207ENST00000435455 COX17Q14061 63 aa9.97□□□□□ -0.81
SMPD4-207ENST00000435455 KRTAP11-1Q8IUC1 163 aa9.97□□□□□ -0.81
SMPD4-207ENST00000435455 PLA2G2DQ9UNK4 145 aa9.97□□□□□ -0.81
SMPD4-207ENST00000435455 H0Y8G0 127 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 NUPR1O60356 82 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 MT1HL1P0DM35 61 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 PFN2P35080 140 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 ZNF625Q96I27 306 aaPredicted RBP9.96□□□□□ -0.82
SMPD4-207ENST00000435455 LINC01600Q96MT4 127 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 ERG28Q9UKR5 140 aa9.96□□□□□ -0.82
SMPD4-207ENST00000435455 MRPL55Q7Z7F7 128 aaKnown RBP9.95□□□□□ -0.82
SMPD4-207ENST00000435455 FABP4P15090 132 aa9.94□□□□□ -0.82
SMPD4-207ENST00000435455 PLNP26678 52 aa9.94□□□□□ -0.82
SMPD4-207ENST00000435455 DIRC1Q969H9 104 aa9.94□□□□□ -0.82
SMPD4-207ENST00000435455 IGLV5-37A0A075B6J1 123 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BKO60814 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BJP06899 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BOP23527 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BBP33778 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BDP58876 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BCP62807 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST2H2BEQ16778 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.93□□□□□ -0.82
SMPD4-207ENST00000435455 NKAPP1Q8N9T2 125 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BHQ93079 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BNQ99877 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 HIST1H2BMQ99879 126 aa9.93□□□□□ -0.82
SMPD4-207ENST00000435455 SND1-IT1Q9HBX3 110 aa9.92□□□□□ -0.82
SMPD4-207ENST00000435455 DPM2O94777 84 aa9.9□□□□□ -0.82
SMPD4-207ENST00000435455 LINC00167Q96N53 147 aa9.9□□□□□ -0.82
SMPD4-207ENST00000435455 MAP1LC3CQ9BXW4 147 aa9.9□□□□□ -0.82
SMPD4-207ENST00000435455 H0Y9J4 135 aa9.89□□□□□ -0.83
SMPD4-207ENST00000435455 LINC00158P58513 81 aa9.89□□□□□ -0.83
SMPD4-207ENST00000435455 HERV-K104P63124 156 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms