RNA–Protein interactions for RNA: ENST00000431283.1

PTPN4-204, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-204ENST00000431283 TEX261Q6UWH6 196 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 SMIM15Q7Z3B0 74 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 OR5A1Q8NGJ0 315 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 TSKUQ8WUA8 353 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 SFT2D1Q8WV19 159 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 DIRC1Q969H9 104 aa2.02□□□□□ -2.09
PTPN4-204ENST00000431283 A0A1B0GV50 99 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 C1orf196B1AJZ1 125 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 UMAD1C9J7I0 102 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 CCL25O15444 150 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 APOMO95445 188 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 NTF3P20783 257 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 RPL35P42766 123 aaKnown RBP2.01□□□□□ -2.09
PTPN4-204ENST00000431283 GNG4P50150 75 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 UBE2D1P51668 147 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 IFITM3Q01628 133 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 SMAGPQ0VAQ4 97 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 LYZL1Q6UWQ5 148 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 C9orf62Q8N4C0 152 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 KCNRGQ8N5I3 272 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 FAM213BQ8TBF2 198 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 FAM210AQ96ND0 272 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 CAMK2N2Q96S95 79 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 ALG5Q9Y673 324 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 LPAP08519 4548 aa2.01□□□□□ -2.09
PTPN4-204ENST00000431283 IGLV1-50A0A075B6I6 118 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 LINC00959A0A1B0GUT2 108 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 IGKV2-29A2NJV5 120 aaPredicted RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 TEX46H3BTG2 121 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 I3L3M4 83 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 COX7A2LO14548 114 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 ARPC5O15511 151 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 IGLC6P0CF74 106 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 PMCHP20382 165 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 RPL13AP40429 203 aaKnown RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 RPL18AQ02543 176 aaKnown RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 Q5BKY6 102 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 C9orf116Q5BN46 136 aaPredicted RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 CENPWQ5EE01 88 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 COA6Q5JTJ3 125 aaKnown RBP2□□□□□ -2.09
PTPN4-204ENST00000431283 GATD1Q8NB37 220 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 MBD3L1Q8WWY6 194 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 SMIM12Q96EX1 92 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 LINC00526Q96FQ7 95 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 MRAP2Q96G30 205 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 MANBALQ9NQG1 85 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 GNG13Q9P2W3 67 aa2□□□□□ -2.09
PTPN4-204ENST00000431283 A0A1W2PNN7 141 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 KANTRA0A1W2PQU2 76 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 C19orf71A6NCJ1 209 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 SDHAF1A6NFY7 115 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 PDE6DO43924 150 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 IGLV7-43P04211 117 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 TLX1NBP0CAT3 122 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 BCL2P10415 239 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 ESDP10768 282 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 FCER1GP30273 86 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 UBE2BP63146 152 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 CCL20P78556 96 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 NUP35Q8NFH5 326 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 BORCS7Q96B45 105 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 RPL39LQ96EH5 51 aaKnown RBP1.99□□□□□ -2.09
PTPN4-204ENST00000431283 IMMP2LQ96T52 175 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 ST20Q9HBF5 79 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 CDC42SE2Q9NRR3 84 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 MED9Q9NWA0 146 aa1.99□□□□□ -2.09
PTPN4-204ENST00000431283 TRAV13-1A0A0B4J241 112 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 C7orf77A4D0Y5 90 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 RAB19A4D1S5 217 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 F8WDY8 70 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.98□□□□□ -2.09
PTPN4-204ENST00000431283 NDUFA1O15239 70 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 PPP1R17O96001 155 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 SPAG11BQ08648 103 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 TMEM241Q24JQ0 296 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 PHF5AQ7RTV0 110 aaKnown RBP1.98□□□□□ -2.09
PTPN4-204ENST00000431283 MRPL52Q86TS9 123 aaKnown RBP1.98□□□□□ -2.09
PTPN4-204ENST00000431283 CNFNQ9BYD5 112 aa1.98□□□□□ -2.09
PTPN4-204ENST00000431283 RPP21Q9H633 154 aaKnown RBP1.98□□□□□ -2.09
PTPN4-204ENST00000431283 CARHSP1Q9Y2V2 147 aaKnown RBP1.98□□□□□ -2.09
PTPN4-204ENST00000431283 TRBV6-5A0A0K0K1A5 114 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 TRBV27A0A0K0K1C4 114 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 A8MWL6 223 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 G3V3Q6 166 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 TSPAN13O95857 204 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 TAGLN2P37802 199 aaKnown RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 FOXA3P55318 350 aaPredicted RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 ZNF345Q14585 488 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 FAM19A5Q7Z5A7 132 aaPredicted RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 C5orf38Q86SI9 138 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 OR10D4PQ8NGN7 298 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 RNASE7Q9H1E1 156 aaKnown RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 TMEM242Q9NWH2 141 aa1.97□□□□□ -2.09
PTPN4-204ENST00000431283 MRPL35Q9NZE8 188 aaKnown RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 CSDC2Q9Y534 153 aaKnown RBP1.97□□□□□ -2.09
PTPN4-204ENST00000431283 TRBV20OR9-2A0A075B6H5 130 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 A0A1B0GUT8 65 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 HMSDA8MTL9 139 aa1.96□□□□□ -2.1
PTPN4-204ENST00000431283 M0QXV9 152 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms