RNA–Protein interactions for RNA: ENST00000428767.1

ALMS1P1-201, Transcript of ALMS1, centrosome and basal body associated protein pseudogene 1, humanhuman

BASIC

Gene ALMS1P1, Length 921 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1P1-201ENST00000428767 KRTDAPP60985 99 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 MRPS36P82909 103 aaKnown RBP7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 ZNF664Q8N3J9 261 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 OR5A1Q8NGJ0 315 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 OR10D4PQ8NGN7 298 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 MAP1LC3CQ9BXW4 147 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
ALMS1P1-201ENST00000428767 SYS1-DBNDD2H3BUS1 97 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 PAPPA-AS1Q5QFB9 102 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 ZC2HC1BQ5TFG8 222 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 Q6ZN92 141 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 VCX2Q9H322 139 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 CST9LQ9H4G1 147 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 PSORS1C2Q9UIG4 136 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 MUC17Q685J3 4493 aa7.11□□□□□ -1.27
ALMS1P1-201ENST00000428767 TRAV8-4A0A0B4J246 113 aa7.1□□□□□ -1.27
ALMS1P1-201ENST00000428767 PMVKQ15126 192 aa7.1□□□□□ -1.27
ALMS1P1-201ENST00000428767 RNASE13Q5GAN3 156 aaKnown RBP7.1□□□□□ -1.27
ALMS1P1-201ENST00000428767 Q6ZUT4 128 aa7.1□□□□□ -1.27
ALMS1P1-201ENST00000428767 AMELXQ99217 191 aa7.1□□□□□ -1.27
ALMS1P1-201ENST00000428767 H0Y8G0 127 aa7.09□□□□□ -1.27
ALMS1P1-201ENST00000428767 PET117Q6UWS5 81 aa7.09□□□□□ -1.27
ALMS1P1-201ENST00000428767 TEX43Q6ZNM6 134 aa7.09□□□□□ -1.27
ALMS1P1-201ENST00000428767 TRAV12-1A0A0B4J245 112 aa7.08□□□□□ -1.28
ALMS1P1-201ENST00000428767 GAGE12HA6NDE8 117 aa7.08□□□□□ -1.28
ALMS1P1-201ENST00000428767 AKR1D1P51857 326 aa7.08□□□□□ -1.28
ALMS1P1-201ENST00000428767 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
ALMS1P1-201ENST00000428767 IGKV3OR2-268A0A0C4DH90 116 aa7.07□□□□□ -1.28
ALMS1P1-201ENST00000428767 C2orf88Q9BSF0 95 aa7.07□□□□□ -1.28
ALMS1P1-201ENST00000428767 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
ALMS1P1-201ENST00000428767 CFAP161Q6P656 301 aa7.06□□□□□ -1.28
ALMS1P1-201ENST00000428767 PMCHL2Q9BQD1 86 aa7.06□□□□□ -1.28
ALMS1P1-201ENST00000428767 CRCT1Q9UGL9 99 aa7.06□□□□□ -1.28
ALMS1P1-201ENST00000428767 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
ALMS1P1-201ENST00000428767 TRAV13-1A0A0B4J241 112 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 LINC00959A0A1B0GUT2 108 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 C20orf202A1L168 122 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 F8VRH5 84 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 SCGB1D1O95968 90 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 UBE2D1P51668 147 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 JOSD1Q15040 202 aaPredicted RBP7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 MRPL35Q9NZE8 188 aaKnown RBP7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 LINC00474Q9P2X8 69 aa7.05□□□□□ -1.28
ALMS1P1-201ENST00000428767 IGLV4-69A0A075B6H9 119 aa7.04□□□□□ -1.28
ALMS1P1-201ENST00000428767 A6NJY4 79 aa7.04□□□□□ -1.28
ALMS1P1-201ENST00000428767 LINC00242Q5T6M2 205 aa7.04□□□□□ -1.28
ALMS1P1-201ENST00000428767 FAM19A3Q7Z5A8 133 aa7.04□□□□□ -1.28
ALMS1P1-201ENST00000428767 LINC00526Q96FQ7 95 aa7.04□□□□□ -1.28
ALMS1P1-201ENST00000428767 TINCRA0A1B0GVN0 87 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 DPM2O94777 84 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 IGLC3P0DOY3 106 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 SS18Q15532 418 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 PYY3Q5JQD4 70 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 C1orf137Q5JT78 98 aa7.03□□□□□ -1.28
ALMS1P1-201ENST00000428767 GVQW2A0A096LPI5 108 aaPredicted RBP7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 C11orf86A6NJI1 115 aa7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 CCL25O15444 150 aa7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 IGKCP01834 107 aa7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 PLNP26678 52 aa7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 ATOH7Q8N100 152 aa7.02□□□□□ -1.29
ALMS1P1-201ENST00000428767 SEC11AP67812 179 aa7.01□□□□□ -1.29
ALMS1P1-201ENST00000428767 CHCHD10Q8WYQ3 142 aaPredicted RBP7.01□□□□□ -1.29
ALMS1P1-201ENST00000428767 CARD19Q96LW7 228 aa7.01□□□□□ -1.29
ALMS1P1-201ENST00000428767 GEMIN7Q9H840 131 aaKnown RBP7.01□□□□□ -1.29
ALMS1P1-201ENST00000428767 XCL1P47992 114 aa7□□□□□ -1.29
ALMS1P1-201ENST00000428767 HERVK_113P63121 156 aa7□□□□□ -1.29
ALMS1P1-201ENST00000428767 GAGE2BQ13066 116 aa7□□□□□ -1.29
ALMS1P1-201ENST00000428767 DIRC1Q969H9 104 aa7□□□□□ -1.29
ALMS1P1-201ENST00000428767 PKIGQ9Y2B9 76 aa7□□□□□ -1.29
ALMS1P1-201ENST00000428767 IGLV5-45A0A087WSX0 123 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 IGHV3OR16-9A0A0B4J2B5 98 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 A0A1W2PNN7 141 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 ZNF22P17026 224 aaPredicted RBP6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 TMEM170BQ5T4T1 132 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 CD164L2Q6UWJ8 174 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 CDKN2A-AS1Q9UH64 79 aa6.99□□□□□ -1.29
ALMS1P1-201ENST00000428767 IGLV1-50A0A075B6I6 118 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 LCE2BO14633 110 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 SMIM6P0DI80 62 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 PTTG1IPP53801 180 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 FOXI1Q12951 378 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 PHF5AQ7RTV0 110 aaKnown RBP6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 LINC00469Q8N7U9 141 aa6.98□□□□□ -1.29
ALMS1P1-201ENST00000428767 H0Y9J4 135 aa6.97□□□□□ -1.29
ALMS1P1-201ENST00000428767 TSPAN13O95857 204 aa6.97□□□□□ -1.29
ALMS1P1-201ENST00000428767 C5orf38Q86SI9 138 aa6.97□□□□□ -1.29
ALMS1P1-201ENST00000428767 A0A087WZ39 114 aa6.96□□□□□ -1.3
ALMS1P1-201ENST00000428767 TMEM223A0PJW6 202 aa6.96□□□□□ -1.3
ALMS1P1-201ENST00000428767 H3BRM9 83 aa6.96□□□□□ -1.3
ALMS1P1-201ENST00000428767 IGLV7-43P04211 117 aa6.96□□□□□ -1.3
ALMS1P1-201ENST00000428767 COX7A2LO14548 114 aa6.95□□□□□ -1.3
ALMS1P1-201ENST00000428767 KRTAP1-4P0C5Y4 121 aa6.95□□□□□ -1.3
ALMS1P1-201ENST00000428767 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
ALMS1P1-201ENST00000428767 SYCNQ0VAF6 134 aa6.95□□□□□ -1.3
ALMS1P1-201ENST00000428767 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
ALMS1P1-201ENST00000428767 LOC107984640A0A0U1RRK4 108 aa6.94□□□□□ -1.3
ALMS1P1-201ENST00000428767 SMIM1B2RUZ4 78 aa6.94□□□□□ -1.3
ALMS1P1-201ENST00000428767 HSBP1L1C9JCN9 74 aa6.94□□□□□ -1.3
ALMS1P1-201ENST00000428767 HERVK_113P61574 105 aa6.94□□□□□ -1.3
ALMS1P1-201ENST00000428767 ANKRD39Q53RE8 183 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms