RNA–Protein interactions for RNA: ENST00000426683.5

HERC3-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 559 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-205ENST00000426683 Q8IZM0 81 aa11.35□□□□□ -0.59
HERC3-205ENST00000426683 TRBV30A0A0K0K1B3 111 aa11.34□□□□□ -0.59
HERC3-205ENST00000426683 TLX1NBP0CAT3 122 aa11.34□□□□□ -0.59
HERC3-205ENST00000426683 CKS1BP61024 79 aa11.34□□□□□ -0.59
HERC3-205ENST00000426683 C7orf33Q8WU49 177 aa11.34□□□□□ -0.59
HERC3-205ENST00000426683 SMIM1B2RUZ4 78 aa11.33□□□□□ -0.6
HERC3-205ENST00000426683 HSBP1O75506 76 aa11.33□□□□□ -0.6
HERC3-205ENST00000426683 IGLC3P0DOY3 106 aa11.33□□□□□ -0.6
HERC3-205ENST00000426683 SRRM2Q9UQ35 2752 aaKnown RBP11.32□□□□□ -0.6
HERC3-205ENST00000426683 SCO1O75880 301 aa11.32□□□□□ -0.6
HERC3-205ENST00000426683 SPINK8P0C7L1 97 aa11.32□□□□□ -0.6
HERC3-205ENST00000426683 Q6ZRP5 223 aa11.32□□□□□ -0.6
HERC3-205ENST00000426683 A0A1W2PNN7 141 aa11.31□□□□□ -0.6
HERC3-205ENST00000426683 H3BRM9 83 aa11.31□□□□□ -0.6
HERC3-205ENST00000426683 GAGE2EQ4V326 116 aa11.3□□□□□ -0.6
HERC3-205ENST00000426683 C9orf116Q5BN46 136 aaPredicted RBP11.3□□□□□ -0.6
HERC3-205ENST00000426683 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
HERC3-205ENST00000426683 GAGE2DQ9UEU5 116 aa11.3□□□□□ -0.6
HERC3-205ENST00000426683 CXCL5P42830 114 aa11.29□□□□□ -0.6
HERC3-205ENST00000426683 FAM19A2Q8N3H0 131 aa11.29□□□□□ -0.6
HERC3-205ENST00000426683 IFI27L1Q96BM0 104 aa11.29□□□□□ -0.6
HERC3-205ENST00000426683 NDUFC2-KCTD14E9PQ53 114 aa11.28□□□□□ -0.6
HERC3-205ENST00000426683 F8VRH5 84 aa11.28□□□□□ -0.6
HERC3-205ENST00000426683 SERF1AO75920 110 aa11.28□□□□□ -0.6
HERC3-205ENST00000426683 ZNF22P17026 224 aaPredicted RBP11.28□□□□□ -0.6
HERC3-205ENST00000426683 HNRNPA3P51991 378 aaKnown RBP11.27□□□□□ -0.61
HERC3-205ENST00000426683 LINC00310P59036 64 aa11.27□□□□□ -0.61
HERC3-205ENST00000426683 CHTOPQ9Y3Y2 248 aaKnown RBP11.27□□□□□ -0.61
HERC3-205ENST00000426683 C11orf86A6NJI1 115 aa11.26□□□□□ -0.61
HERC3-205ENST00000426683 MYCBP2O75592 4640 aa11.26□□□□□ -0.61
HERC3-205ENST00000426683 TRAV12-1A0A0B4J245 112 aa11.25□□□□□ -0.61
HERC3-205ENST00000426683 FAM168BA1KXE4 195 aa11.25□□□□□ -0.61
HERC3-205ENST00000426683 FLG2Q5D862 2391 aaPredicted RBP11.25□□□□□ -0.61
HERC3-205ENST00000426683 PKHD1L1Q86WI1 4243 aa11.24□□□□□ -0.61
HERC3-205ENST00000426683 TMEM170BQ5T4T1 132 aa11.24□□□□□ -0.61
HERC3-205ENST00000426683 IGLV5-39A0A0G2JS06 123 aa11.23□□□□□ -0.61
HERC3-205ENST00000426683 NUPR1O60356 82 aa11.23□□□□□ -0.61
HERC3-205ENST00000426683 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
HERC3-205ENST00000426683 PHF5AQ7RTV0 110 aaKnown RBP11.23□□□□□ -0.61
HERC3-205ENST00000426683 LEPROTL1O95214 131 aa11.22□□□□□ -0.61
HERC3-205ENST00000426683 C9orf129Q5T035 196 aaKnown RBP11.22□□□□□ -0.61
HERC3-205ENST00000426683 FAM19A5Q7Z5A7 132 aaPredicted RBP11.22□□□□□ -0.61
HERC3-205ENST00000426683 H0Y8G0 127 aa11.2□□□□□ -0.62
HERC3-205ENST00000426683 KRTAP7-1Q8IUC3 87 aa11.19□□□□□ -0.62
HERC3-205ENST00000426683 XAGE1AQ9HD64 81 aa11.19□□□□□ -0.62
HERC3-205ENST00000426683 KRTAP29-1A8MX34 341 aaPredicted RBP11.18□□□□□ -0.62
HERC3-205ENST00000426683 J3QL48 77 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BKO60814 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BJP06899 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 FABP4P15090 132 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BOP23527 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BBP33778 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BDP58876 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BCP62807 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST2H2BEQ16778 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BHQ93079 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BNQ99877 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HIST1H2BMQ99879 126 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 HSPB8Q9UJY1 196 aa11.18□□□□□ -0.62
HERC3-205ENST00000426683 M0QXV9 152 aa11.17□□□□□ -0.62
HERC3-205ENST00000426683 TMEM223A0PJW6 202 aa11.16□□□□□ -0.62
HERC3-205ENST00000426683 ODF1Q14990 250 aa11.16□□□□□ -0.62
HERC3-205ENST00000426683 FAT3Q8TDW7 4589 aa11.15□□□□□ -0.62
HERC3-205ENST00000426683 SERTAD4-AS1Q5TG53 156 aa11.15□□□□□ -0.62
HERC3-205ENST00000426683 PSORS1C2Q9UIG4 136 aa11.15□□□□□ -0.62
HERC3-205ENST00000426683 OXTP01178 125 aa11.14□□□□□ -0.63
HERC3-205ENST00000426683 LRP1Q07954 4544 aaKnown RBP11.14□□□□□ -0.63
HERC3-205ENST00000426683 ZNF625Q96I27 306 aaPredicted RBP11.13□□□□□ -0.63
HERC3-205ENST00000426683 PFN2P35080 140 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 UBE2BP63146 152 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 C1orf137Q5JT78 98 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 SFTA2Q6UW10 78 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 KRTAP11-1Q8IUC1 163 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 ERG28Q9UKR5 140 aa11.12□□□□□ -0.63
HERC3-205ENST00000426683 MAP1LC3CQ9BXW4 147 aa11.11□□□□□ -0.63
HERC3-205ENST00000426683 C22orf24Q9Y442 160 aa11.11□□□□□ -0.63
HERC3-205ENST00000426683 HERC1Q15751 4861 aa11.1□□□□□ -0.63
HERC3-205ENST00000426683 S100A1P23297 94 aa11.1□□□□□ -0.63
HERC3-205ENST00000426683 SPINK6Q6UWN8 80 aa11.1□□□□□ -0.63
HERC3-205ENST00000426683 PMCHL2Q9BQD1 86 aa11.1□□□□□ -0.63
HERC3-205ENST00000426683 PLNP26678 52 aa11.09□□□□□ -0.63
HERC3-205ENST00000426683 DPM2O94777 84 aa11.08□□□□□ -0.64
HERC3-205ENST00000426683 SRSF9Q13242 221 aaKnown RBP eCLIP11.08□□□□□ -0.64
HERC3-205ENST00000426683 COX17Q14061 63 aa11.08□□□□□ -0.64
HERC3-205ENST00000426683 LBHQ53QV2 105 aaPredicted RBP11.08□□□□□ -0.64
HERC3-205ENST00000426683 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
HERC3-205ENST00000426683 PLA2G2DQ9UNK4 145 aa11.07□□□□□ -0.64
HERC3-205ENST00000426683 DMBT1Q9UGM3 2413 aaPredicted RBP11.07□□□□□ -0.64
HERC3-205ENST00000426683 IGKCP01834 107 aa11.06□□□□□ -0.64
HERC3-205ENST00000426683 MRPL55Q7Z7F7 128 aaKnown RBP11.06□□□□□ -0.64
HERC3-205ENST00000426683 SND1-IT1Q9HBX3 110 aa11.06□□□□□ -0.64
HERC3-205ENST00000426683 TP73-AS1Q9UF72 201 aa11.06□□□□□ -0.64
HERC3-205ENST00000426683 IGLV7-43P04211 117 aa11.05□□□□□ -0.64
HERC3-205ENST00000426683 SYS1-DBNDD2H3BUS1 97 aa11.04□□□□□ -0.64
HERC3-205ENST00000426683 LINC00158P58513 81 aa11.04□□□□□ -0.64
HERC3-205ENST00000426683 COA6Q5JTJ3 125 aaKnown RBP11.04□□□□□ -0.64
HERC3-205ENST00000426683 LEPROTO15243 131 aa11.03□□□□□ -0.64
HERC3-205ENST00000426683 HERVK_113P61574 105 aa11.03□□□□□ -0.64
HERC3-205ENST00000426683 NDUFA12Q9UI09 145 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 110.3 ms