RNA–Protein interactions for RNA: ENST00000426546.6

CCDC107-206, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCDC107, Length 1,242 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-206ENST00000426546 TMEM141Q96I45 108 aa12.42□□□□□ -0.42
CCDC107-206ENST00000426546 TIMM17AQ99595 171 aa12.42□□□□□ -0.42
CCDC107-206ENST00000426546 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
CCDC107-206ENST00000426546 F8WDY8 70 aa12.41□□□□□ -0.42
CCDC107-206ENST00000426546 PDZD11Q5EBL8 140 aa12.41□□□□□ -0.42
CCDC107-206ENST00000426546 Q6ZN92 141 aa12.41□□□□□ -0.42
CCDC107-206ENST00000426546 RNF213Q63HN8 5207 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 A0A1W2PNN7 141 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 NPSP0C0P6 89 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 RPL18AQ02543 176 aaKnown RBP12.4□□□□□ -0.42
CCDC107-206ENST00000426546 ZC2HC1BQ5TFG8 222 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 REG3GQ6UW15 175 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 ORAOV1Q8WV07 137 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 VCX2Q9H322 139 aa12.4□□□□□ -0.42
CCDC107-206ENST00000426546 SRSF9Q13242 221 aaKnown RBP eCLIP12.39□□□□□ -0.43
CCDC107-206ENST00000426546 C9orf116Q5BN46 136 aaPredicted RBP12.39□□□□□ -0.43
CCDC107-206ENST00000426546 PAPPA-AS1Q5QFB9 102 aa12.39□□□□□ -0.43
CCDC107-206ENST00000426546 TEX43Q6ZNM6 134 aa12.39□□□□□ -0.43
CCDC107-206ENST00000426546 MRPL35Q9NZE8 188 aaKnown RBP12.39□□□□□ -0.43
CCDC107-206ENST00000426546 A0A0J9YXV3 536 aa12.38□□□□□ -0.43
CCDC107-206ENST00000426546 ATP5LO75964 103 aa12.38□□□□□ -0.43
CCDC107-206ENST00000426546 COA6Q5JTJ3 125 aaKnown RBP12.38□□□□□ -0.43
CCDC107-206ENST00000426546 AMELXQ99217 191 aa12.37□□□□□ -0.43
CCDC107-206ENST00000426546 C2orf88Q9BSF0 95 aa12.37□□□□□ -0.43
CCDC107-206ENST00000426546 NDUFA1O15239 70 aa12.36□□□□□ -0.43
CCDC107-206ENST00000426546 LINC00173Q6ZV60 143 aa12.36□□□□□ -0.43
CCDC107-206ENST00000426546 LEPROTL1O95214 131 aa12.35□□□□□ -0.43
CCDC107-206ENST00000426546 A0A087WZ39 114 aa12.34□□□□□ -0.43
CCDC107-206ENST00000426546 FABP4P15090 132 aa12.34□□□□□ -0.43
CCDC107-206ENST00000426546 IFI27L1Q96BM0 104 aa12.34□□□□□ -0.43
CCDC107-206ENST00000426546 S100A6P06703 90 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 TLX1NBP0CAT3 122 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 ODF1Q14990 250 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 PMVKQ15126 192 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 CST9LQ9H4G1 147 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 PSORS1C2Q9UIG4 136 aa12.33□□□□□ -0.44
CCDC107-206ENST00000426546 UBE2D1P51668 147 aa12.32□□□□□ -0.44
CCDC107-206ENST00000426546 KRTAP10-8P60410 259 aa12.32□□□□□ -0.44
CCDC107-206ENST00000426546 LINC00242Q5T6M2 205 aa12.32□□□□□ -0.44
CCDC107-206ENST00000426546 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
CCDC107-206ENST00000426546 HSPB8Q9UJY1 196 aa12.32□□□□□ -0.44
CCDC107-206ENST00000426546 UNQ6190/PRO20217Q6UXQ8 127 aa12.31□□□□□ -0.44
CCDC107-206ENST00000426546 KIAA0087Q14695 138 aa12.3□□□□□ -0.44
CCDC107-206ENST00000426546 PHF5AQ7RTV0 110 aaKnown RBP12.3□□□□□ -0.44
CCDC107-206ENST00000426546 C6orf48Q9UBA6 75 aa12.3□□□□□ -0.44
CCDC107-206ENST00000426546 LINC01561Q8N1V8 128 aa12.28□□□□□ -0.44
CCDC107-206ENST00000426546 TRBV30A0A0K0K1B3 111 aa12.27□□□□□ -0.45
CCDC107-206ENST00000426546 H0Y8G0 127 aa12.27□□□□□ -0.45
CCDC107-206ENST00000426546 SNRPEP62304 92 aaKnown RBP12.27□□□□□ -0.45
CCDC107-206ENST00000426546 C1orf137Q5JT78 98 aa12.26□□□□□ -0.45
CCDC107-206ENST00000426546 PACRGQ96M98 296 aaPredicted RBP12.26□□□□□ -0.45
CCDC107-206ENST00000426546 GEMIN7Q9H840 131 aaKnown RBP12.26□□□□□ -0.45
CCDC107-206ENST00000426546 TRAV12-1A0A0B4J245 112 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 FAM168BA1KXE4 195 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 S100A2P29034 98 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 SEC11AP67812 179 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 FAM19A3Q7Z5A8 133 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 HIST3H2BBQ8N257 126 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 MAP1LC3CQ9BXW4 147 aa12.25□□□□□ -0.45
CCDC107-206ENST00000426546 CHTOPQ9Y3Y2 248 aaKnown RBP12.25□□□□□ -0.45
CCDC107-206ENST00000426546 TINCRA0A1B0GVN0 87 aa12.24□□□□□ -0.45
CCDC107-206ENST00000426546 HERVK_113P63121 156 aa12.24□□□□□ -0.45
CCDC107-206ENST00000426546 GAGE2EQ4V326 116 aa12.24□□□□□ -0.45
CCDC107-206ENST00000426546 GAGE2DQ9UEU5 116 aa12.24□□□□□ -0.45
CCDC107-206ENST00000426546 TMA7Q9Y2S6 64 aaKnown RBP12.24□□□□□ -0.45
CCDC107-206ENST00000426546 NDUFC2-KCTD14E9PQ53 114 aa12.23□□□□□ -0.45
CCDC107-206ENST00000426546 C2orf82Q6UX34 121 aa12.23□□□□□ -0.45
CCDC107-206ENST00000426546 FAM19A5Q7Z5A7 132 aaPredicted RBP12.23□□□□□ -0.45
CCDC107-206ENST00000426546 IGLV7-43P04211 117 aa12.22□□□□□ -0.45
CCDC107-206ENST00000426546 IGLC3P0DOY3 106 aa12.22□□□□□ -0.45
CCDC107-206ENST00000426546 C5orf52A6NGY3 159 aa12.21□□□□□ -0.45
CCDC107-206ENST00000426546 LINC00469Q8N7U9 141 aa12.21□□□□□ -0.45
CCDC107-206ENST00000426546 CDKN2A-AS1Q9UH64 79 aa12.21□□□□□ -0.45
CCDC107-206ENST00000426546 M0QXV9 152 aa12.2□□□□□ -0.46
CCDC107-206ENST00000426546 KRTAP11-1Q8IUC1 163 aa12.2□□□□□ -0.46
CCDC107-206ENST00000426546 KRTAP7-1Q8IUC3 87 aa12.2□□□□□ -0.46
CCDC107-206ENST00000426546 DIRC1Q969H9 104 aa12.2□□□□□ -0.46
CCDC107-206ENST00000426546 HIST1H2BLQ99880 126 aa12.2□□□□□ -0.46
CCDC107-206ENST00000426546 F8VRH5 84 aa12.19□□□□□ -0.46
CCDC107-206ENST00000426546 SYS1-DBNDD2H3BUS1 97 aa12.19□□□□□ -0.46
CCDC107-206ENST00000426546 PRSS2P07478 247 aa12.19□□□□□ -0.46
CCDC107-206ENST00000426546 KRTDAPP60985 99 aa12.19□□□□□ -0.46
CCDC107-206ENST00000426546 C11orf86A6NJI1 115 aa12.18□□□□□ -0.46
CCDC107-206ENST00000426546 C3orf79P0CE67 100 aa12.18□□□□□ -0.46
CCDC107-206ENST00000426546 Q8IZM0 81 aa12.18□□□□□ -0.46
CCDC107-206ENST00000426546 PMCHL2Q9BQD1 86 aa12.18□□□□□ -0.46
CCDC107-206ENST00000426546 IGLV5-45A0A087WSX0 123 aa12.17□□□□□ -0.46
CCDC107-206ENST00000426546 CKS1BP61024 79 aa12.17□□□□□ -0.46
CCDC107-206ENST00000426546 C9orf129Q5T035 196 aaKnown RBP12.17□□□□□ -0.46
CCDC107-206ENST00000426546 PET117Q6UWS5 81 aa12.17□□□□□ -0.46
CCDC107-206ENST00000426546 H0Y9J4 135 aa12.16□□□□□ -0.46
CCDC107-206ENST00000426546 H3BRM9 83 aa12.16□□□□□ -0.46
CCDC107-206ENST00000426546 ZNF22P17026 224 aaPredicted RBP12.16□□□□□ -0.46
CCDC107-206ENST00000426546 C6orf226Q5I0X4 101 aa12.16□□□□□ -0.46
CCDC107-206ENST00000426546 TOMM7Q9P0U1 55 aa12.16□□□□□ -0.46
CCDC107-206ENST00000426546 UBE2BP63146 152 aa12.15□□□□□ -0.46
CCDC107-206ENST00000426546 TMEM170BQ5T4T1 132 aa12.15□□□□□ -0.46
CCDC107-206ENST00000426546 DPM2O94777 84 aa12.14□□□□□ -0.47
CCDC107-206ENST00000426546 SPINK8P0C7L1 97 aa12.14□□□□□ -0.47
CCDC107-206ENST00000426546 PLNP26678 52 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 112.6 ms