RNA–Protein interactions for RNA: ENST00000424937.1

PTCHD3P2-201, Transcript of patched domain containing 3 pseudogene 2, humanhuman

BASIC

Gene PTCHD3P2, Length 1,205 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P2-201ENST00000424937 DMBT1Q9UGM3 2413 aaPredicted RBP13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 IGLV5-45A0A087WSX0 123 aa13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 TLX1NBP0CAT3 122 aa13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 PDZD11Q5EBL8 140 aa13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 C6orf226Q5I0X4 101 aa13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 Q6ZRP5 223 aa13.99□□□□□ -0.17
PTCHD3P2-201ENST00000424937 A0A1W2PNN7 141 aa13.98□□□□□ -0.17
PTCHD3P2-201ENST00000424937 SMIM1B2RUZ4 78 aa13.98□□□□□ -0.17
PTCHD3P2-201ENST00000424937 C9orf116Q5BN46 136 aaPredicted RBP13.98□□□□□ -0.17
PTCHD3P2-201ENST00000424937 GAGE2EQ4V326 116 aa13.97□□□□□ -0.17
PTCHD3P2-201ENST00000424937 GAGE2DQ9UEU5 116 aa13.97□□□□□ -0.17
PTCHD3P2-201ENST00000424937 ATP5LO75964 103 aa13.96□□□□□ -0.17
PTCHD3P2-201ENST00000424937 TRGC2P03986 189 aa13.96□□□□□ -0.17
PTCHD3P2-201ENST00000424937 CHCHD1Q96BP2 118 aaKnown RBP13.96□□□□□ -0.17
PTCHD3P2-201ENST00000424937 SPINK8P0C7L1 97 aa13.95□□□□□ -0.18
PTCHD3P2-201ENST00000424937 PRR3P79522 188 aaKnown RBP13.95□□□□□ -0.18
PTCHD3P2-201ENST00000424937 NDUFC2-KCTD14E9PQ53 114 aa13.94□□□□□ -0.18
PTCHD3P2-201ENST00000424937 IGLC3P0DOY3 106 aa13.94□□□□□ -0.18
PTCHD3P2-201ENST00000424937 J3QL48 77 aa13.93□□□□□ -0.18
PTCHD3P2-201ENST00000424937 CXCL5P42830 114 aa13.93□□□□□ -0.18
PTCHD3P2-201ENST00000424937 BAGE3Q86Y29 109 aa13.93□□□□□ -0.18
PTCHD3P2-201ENST00000424937 COX7B2Q8TF08 81 aa13.93□□□□□ -0.18
PTCHD3P2-201ENST00000424937 F8VRH5 84 aa13.92□□□□□ -0.18
PTCHD3P2-201ENST00000424937 H3BRM9 83 aa13.92□□□□□ -0.18
PTCHD3P2-201ENST00000424937 FAM168BA1KXE4 195 aa13.91□□□□□ -0.18
PTCHD3P2-201ENST00000424937 KRTAP29-1A8MX34 341 aaPredicted RBP13.91□□□□□ -0.18
PTCHD3P2-201ENST00000424937 FAM19A5Q7Z5A7 132 aaPredicted RBP13.9□□□□□ -0.18
PTCHD3P2-201ENST00000424937 COLCA2A8K830 154 aa13.89□□□□□ -0.19
PTCHD3P2-201ENST00000424937 HSBP1O75506 76 aa13.89□□□□□ -0.19
PTCHD3P2-201ENST00000424937 ZNF22P17026 224 aaPredicted RBP13.89□□□□□ -0.19
PTCHD3P2-201ENST00000424937 PHF5AQ7RTV0 110 aaKnown RBP13.89□□□□□ -0.19
PTCHD3P2-201ENST00000424937 LRP1Q07954 4544 aaKnown RBP13.87□□□□□ -0.19
PTCHD3P2-201ENST00000424937 FAT3Q8TDW7 4589 aa13.87□□□□□ -0.19
PTCHD3P2-201ENST00000424937 C9orf129Q5T035 196 aaKnown RBP13.87□□□□□ -0.19
PTCHD3P2-201ENST00000424937 FAM19A2Q8N3H0 131 aa13.87□□□□□ -0.19
PTCHD3P2-201ENST00000424937 IFI27L1Q96BM0 104 aa13.87□□□□□ -0.19
PTCHD3P2-201ENST00000424937 C11orf86A6NJI1 115 aa13.86□□□□□ -0.19
PTCHD3P2-201ENST00000424937 CHTOPQ9Y3Y2 248 aaKnown RBP13.86□□□□□ -0.19
PTCHD3P2-201ENST00000424937 SCO1O75880 301 aa13.85□□□□□ -0.19
PTCHD3P2-201ENST00000424937 SERF1AO75920 110 aa13.85□□□□□ -0.19
PTCHD3P2-201ENST00000424937 OXTP01178 125 aa13.85□□□□□ -0.19
PTCHD3P2-201ENST00000424937 TMEM170BQ5T4T1 132 aa13.84□□□□□ -0.19
PTCHD3P2-201ENST00000424937 IGLV5-39A0A0G2JS06 123 aa13.83□□□□□ -0.2
PTCHD3P2-201ENST00000424937 LINC00310P59036 64 aa13.83□□□□□ -0.2
PTCHD3P2-201ENST00000424937 HERC1Q15751 4861 aa13.82□□□□□ -0.2
PTCHD3P2-201ENST00000424937 TRAV12-1A0A0B4J245 112 aa13.82□□□□□ -0.2
PTCHD3P2-201ENST00000424937 M0QXV9 152 aa13.82□□□□□ -0.2
PTCHD3P2-201ENST00000424937 KRTAP7-1Q8IUC3 87 aa13.82□□□□□ -0.2
PTCHD3P2-201ENST00000424937 XAGE1AQ9HD64 81 aa13.82□□□□□ -0.2
PTCHD3P2-201ENST00000424937 PSORS1C2Q9UIG4 136 aa13.81□□□□□ -0.2
PTCHD3P2-201ENST00000424937 H0Y8G0 127 aa13.78□□□□□ -0.2
PTCHD3P2-201ENST00000424937 LEPROTL1O95214 131 aa13.78□□□□□ -0.2
PTCHD3P2-201ENST00000424937 SERTAD4-AS1Q5TG53 156 aa13.78□□□□□ -0.2
PTCHD3P2-201ENST00000424937 UBE2BP63146 152 aa13.77□□□□□ -0.21
PTCHD3P2-201ENST00000424937 C1orf137Q5JT78 98 aa13.77□□□□□ -0.21
PTCHD3P2-201ENST00000424937 NUPR1O60356 82 aa13.76□□□□□ -0.21
PTCHD3P2-201ENST00000424937 KRTAP11-1Q8IUC1 163 aa13.76□□□□□ -0.21
PTCHD3P2-201ENST00000424937 SPINK6Q6UWN8 80 aa13.75□□□□□ -0.21
PTCHD3P2-201ENST00000424937 TMEM223A0PJW6 202 aa13.73□□□□□ -0.21
PTCHD3P2-201ENST00000424937 PFN2P35080 140 aa13.73□□□□□ -0.21
PTCHD3P2-201ENST00000424937 HSPB8Q9UJY1 196 aa13.73□□□□□ -0.21
PTCHD3P2-201ENST00000424937 FABP4P15090 132 aa13.72□□□□□ -0.21
PTCHD3P2-201ENST00000424937 SRSF9Q13242 221 aaKnown RBP eCLIP13.72□□□□□ -0.21
PTCHD3P2-201ENST00000424937 ODF1Q14990 250 aa13.72□□□□□ -0.21
PTCHD3P2-201ENST00000424937 ZNF625Q96I27 306 aaPredicted RBP13.71□□□□□ -0.21
PTCHD3P2-201ENST00000424937 ERG28Q9UKR5 140 aa13.71□□□□□ -0.21
PTCHD3P2-201ENST00000424937 C22orf24Q9Y442 160 aa13.71□□□□□ -0.21
PTCHD3P2-201ENST00000424937 HIST1H2BKO60814 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BJP06899 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BOP23527 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BBP33778 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BDP58876 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BCP62807 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST2H2BEQ16778 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 SFTA2Q6UW10 78 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BHQ93079 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BNQ99877 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 HIST1H2BMQ99879 126 aa13.7□□□□□ -0.22
PTCHD3P2-201ENST00000424937 IGLV7-43P04211 117 aa13.68□□□□□ -0.22
PTCHD3P2-201ENST00000424937 LBHQ53QV2 105 aaPredicted RBP13.68□□□□□ -0.22
PTCHD3P2-201ENST00000424937 MT1HL1P0DM35 61 aa13.67□□□□□ -0.22
PTCHD3P2-201ENST00000424937 REG3GQ6UW15 175 aa13.67□□□□□ -0.22
PTCHD3P2-201ENST00000424937 MRPL55Q7Z7F7 128 aaKnown RBP13.66□□□□□ -0.22
PTCHD3P2-201ENST00000424937 TP73-AS1Q9UF72 201 aa13.66□□□□□ -0.22
PTCHD3P2-201ENST00000424937 PLA2G2DQ9UNK4 145 aa13.66□□□□□ -0.22
PTCHD3P2-201ENST00000424937 COX17Q14061 63 aa13.65□□□□□ -0.22
PTCHD3P2-201ENST00000424937 PLNP26678 52 aa13.64□□□□□ -0.23
PTCHD3P2-201ENST00000424937 NKAPP1Q8N9T2 125 aa13.63□□□□□ -0.23
PTCHD3P2-201ENST00000424937 LINC01600Q96MT4 127 aa13.63□□□□□ -0.23
PTCHD3P2-201ENST00000424937 PMCHL2Q9BQD1 86 aa13.63□□□□□ -0.23
PTCHD3P2-201ENST00000424937 SND1-IT1Q9HBX3 110 aa13.63□□□□□ -0.23
PTCHD3P2-201ENST00000424937 DPM2O94777 84 aa13.62□□□□□ -0.23
PTCHD3P2-201ENST00000424937 MAP1LC3CQ9BXW4 147 aa13.62□□□□□ -0.23
PTCHD3P2-201ENST00000424937 IGLV5-37A0A075B6J1 123 aa13.61□□□□□ -0.23
PTCHD3P2-201ENST00000424937 GAGE10A6NGK3 116 aa13.61□□□□□ -0.23
PTCHD3P2-201ENST00000424937 LINC00158P58513 81 aa13.6□□□□□ -0.23
PTCHD3P2-201ENST00000424937 DIRC1Q969H9 104 aa13.6□□□□□ -0.23
PTCHD3P2-201ENST00000424937 LINC00167Q96N53 147 aa13.6□□□□□ -0.23
PTCHD3P2-201ENST00000424937 A0A0U1RRA0 63 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms