RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 SMIM7Q9BQ49 75 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 MRPL35Q9NZE8 188 aaKnown RBP3.28□□□□□ -1.88
VPS8-205ENST00000424721 NAT8BQ9UHF3 227 aa3.28□□□□□ -1.88
VPS8-205ENST00000424721 PKHD1L1Q86WI1 4243 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 IGLV1-50A0A075B6I6 118 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 TGIF2-C20orf24A0A0A6YYL0 155 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 PPBPP02775 128 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 IGLV7-43P04211 117 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 G0S2P27469 103 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 CKS2P33552 79 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 UBE2D1P51668 147 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 NDUFV3P56181 108 aaKnown RBP3.27□□□□□ -1.89
VPS8-205ENST00000424721 RPL32P62910 135 aaKnown RBP3.27□□□□□ -1.89
VPS8-205ENST00000424721 ADAMTSL4-AS1Q5T5F5 129 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 C5orf38Q86SI9 138 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 PACRGQ96M98 296 aaPredicted RBP3.27□□□□□ -1.89
VPS8-205ENST00000424721 SPANXA1Q9NS26 97 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 UBE2D4Q9Y2X8 147 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 HMCN2Q8NDA2 5059 aa3.27□□□□□ -1.89
VPS8-205ENST00000424721 TRBV24-1A0A075B6N3 115 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.26□□□□□ -1.89
VPS8-205ENST00000424721 GAS8-AS1O95177 125 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 TLX1NBP0CAT3 122 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 UBE2BP63146 152 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 HBBP68871 147 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 MRPS36P82909 103 aaKnown RBP3.26□□□□□ -1.89
VPS8-205ENST00000424721 SPAG11BQ08648 103 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 FAM104BQ5XKR9 115 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 LINC01551Q86U37 167 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 AMN1Q8IY45 258 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 ORAOV1Q8WV07 137 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 OPRPNQ99935 248 aaPredicted RBP3.26□□□□□ -1.89
VPS8-205ENST00000424721 CARHSP1Q9Y2V2 147 aaKnown RBP3.26□□□□□ -1.89
VPS8-205ENST00000424721 PYGO1Q9Y3Y4 419 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 UBR4Q5T4S7 5183 aa3.26□□□□□ -1.89
VPS8-205ENST00000424721 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 A0A1B0GWB2 263 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 H0Y9J4 135 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 HSBP1O75506 76 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 IFI27P40305 119 aaPredicted RBP3.25□□□□□ -1.89
VPS8-205ENST00000424721 PEA15Q15121 130 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 VAMP3Q15836 100 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 PHF5AQ7RTV0 110 aaKnown RBP3.25□□□□□ -1.89
VPS8-205ENST00000424721 OCR1Q9BZK8 76 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 SMDT1Q9H4I9 107 aa3.25□□□□□ -1.89
VPS8-205ENST00000424721 IGHV3OR16-9A0A0B4J2B5 98 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 CFC1BP0CG36 223 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 CFC1P0CG37 223 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 CKS1BP61024 79 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 SEC11AP67812 179 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 MRPL51Q4U2R6 128 aaKnown RBP3.24□□□□□ -1.89
VPS8-205ENST00000424721 ALKAL2Q6UX46 152 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 Q6ZN92 141 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 LITAFQ99732 161 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 C2orf88Q9BSF0 95 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 NAT8Q9UHE5 227 aa3.24□□□□□ -1.89
VPS8-205ENST00000424721 IGLV4-3A0A075B6K6 122 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 SMIM27A0A1W2PRY6 76 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 NDUFC2-KCTD14E9PQ53 114 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 SMKR1H3BMG3 65 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 NUPR1O60356 82 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 SRP19P09132 144 aaKnown RBP3.23□□□□□ -1.89
VPS8-205ENST00000424721 ADIRFQ15847 76 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 PRR4Q16378 134 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 RNASE13Q5GAN3 156 aaKnown RBP3.23□□□□□ -1.89
VPS8-205ENST00000424721 UNQ6190/PRO20217Q6UXQ8 127 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 TEX43Q6ZNM6 134 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 TMEM136Q6ZRR5 245 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 AKAP14Q86UN6 197 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 ORMDL3Q8N138 153 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 LAMTOR2Q9Y2Q5 125 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 V9GYV3 84 aa3.23□□□□□ -1.89
VPS8-205ENST00000424721 RPL37AP8A6NKH3 93 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 K7EMI3 77 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 M0QXV9 152 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 ZNF861PO60384 105 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 RPL28P46779 137 aaKnown RBP3.22□□□□□ -1.89
VPS8-205ENST00000424721 RPL23P62829 140 aaKnown RBP3.22□□□□□ -1.89
VPS8-205ENST00000424721 Q6ZUT4 128 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 ATP5L2Q7Z4Y8 100 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 FAM19A5Q7Z5A7 132 aaPredicted RBP3.22□□□□□ -1.89
VPS8-205ENST00000424721 TMEM141Q96I45 108 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 SMIM2Q9BVW6 85 aa3.22□□□□□ -1.89
VPS8-205ENST00000424721 LINC01549A6NIU2 74 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 D6R8Y8 96 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 RPL39P62891 51 aaKnown RBP3.21□□□□□ -1.9
VPS8-205ENST00000424721 ORMDL2Q53FV1 153 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 PRELID3AQ96N28 172 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 MAP1LC3AQ9H492 121 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 C6orf48Q9UBA6 75 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 CYSLTR1Q9Y271 337 aa3.21□□□□□ -1.9
VPS8-205ENST00000424721 CRYGAP11844 174 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 CXCL5P42830 114 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 HERVK_113P63121 156 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 CTAG1AP78358 180 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 MRPL54Q6P161 138 aaKnown RBP3.2□□□□□ -1.9
VPS8-205ENST00000424721 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 TOMM7Q9P0U1 55 aa3.2□□□□□ -1.9
VPS8-205ENST00000424721 TP73-AS1Q9UF72 201 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms