RNA–Protein interactions for RNA: ENST00000421712.1

BRAT1-202, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 3

Gene BRAT1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-202ENST00000421712 C2orf82Q6UX34 121 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BHQ93079 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BNQ99877 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 HIST1H2BMQ99879 126 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 MRPL35Q9NZE8 188 aaKnown RBP10.06□□□□□ -0.8
BRAT1-202ENST00000421712 DNAH8Q96JB1 4490 aa10.06□□□□□ -0.8
BRAT1-202ENST00000421712 IGLV5-45A0A087WSX0 123 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 A0A096LNI7 61 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
BRAT1-202ENST00000421712 RNF151Q2KHN1 245 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 Q8IZM0 81 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 SPACA4Q8TDM5 124 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 LINC00474Q9P2X8 69 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 HSPB8Q9UJY1 196 aa10.05□□□□□ -0.8
BRAT1-202ENST00000421712 A0A087WYN8 130 aa10.04□□□□□ -0.8
BRAT1-202ENST00000421712 SMIM1B2RUZ4 78 aa10.04□□□□□ -0.8
BRAT1-202ENST00000421712 TMEM170BQ5T4T1 132 aa10.04□□□□□ -0.8
BRAT1-202ENST00000421712 TRAV12-1A0A0B4J245 112 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 CIRBPQ14011 172 aaKnown RBP10.03□□□□□ -0.8
BRAT1-202ENST00000421712 Q5VSD8 79 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 LINC00528Q8N1L1 170 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 STPG4Q8N801 248 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 COX7B2Q8TF08 81 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 C6orf48Q9UBA6 75 aa10.03□□□□□ -0.8
BRAT1-202ENST00000421712 TRBV30A0A0K0K1B3 111 aa10.02□□□□□ -0.81
BRAT1-202ENST00000421712 C11orf86A6NJI1 115 aa10.02□□□□□ -0.81
BRAT1-202ENST00000421712 ZNF22P17026 224 aaPredicted RBP10.02□□□□□ -0.81
BRAT1-202ENST00000421712 PTTG1IPP53801 180 aa10.02□□□□□ -0.81
BRAT1-202ENST00000421712 KRTAP4-5Q9BYR2 181 aa10.02□□□□□ -0.81
BRAT1-202ENST00000421712 F8VRH5 84 aa10□□□□□ -0.81
BRAT1-202ENST00000421712 CXCL5P42830 114 aa10□□□□□ -0.81
BRAT1-202ENST00000421712 PLA2G1BP04054 148 aaKnown RBP9.99□□□□□ -0.81
BRAT1-202ENST00000421712 GAGE2EQ4V326 116 aa9.99□□□□□ -0.81
BRAT1-202ENST00000421712 C9orf116Q5BN46 136 aaPredicted RBP9.99□□□□□ -0.81
BRAT1-202ENST00000421712 MAP1LC3CQ9BXW4 147 aa9.99□□□□□ -0.81
BRAT1-202ENST00000421712 GAGE2DQ9UEU5 116 aa9.99□□□□□ -0.81
BRAT1-202ENST00000421712 PLAC8Q9NZF1 115 aa9.98□□□□□ -0.81
BRAT1-202ENST00000421712 TLX1NBP0CAT3 122 aa9.97□□□□□ -0.81
BRAT1-202ENST00000421712 Q6ZRP5 223 aa9.97□□□□□ -0.81
BRAT1-202ENST00000421712 NDUFC2-KCTD14E9PQ53 114 aa9.96□□□□□ -0.82
BRAT1-202ENST00000421712 ODF1Q14990 250 aa9.96□□□□□ -0.82
BRAT1-202ENST00000421712 IGLV5-39A0A0G2JS06 123 aa9.95□□□□□ -0.82
BRAT1-202ENST00000421712 C7orf33Q8WU49 177 aa9.95□□□□□ -0.82
BRAT1-202ENST00000421712 RPL37AP61513 92 aaKnown RBP9.94□□□□□ -0.82
BRAT1-202ENST00000421712 PMCHL2Q9BQD1 86 aa9.94□□□□□ -0.82
BRAT1-202ENST00000421712 A0A1W2PNN7 141 aa9.93□□□□□ -0.82
BRAT1-202ENST00000421712 TMEM223A0PJW6 202 aa9.93□□□□□ -0.82
BRAT1-202ENST00000421712 PLNP26678 52 aa9.93□□□□□ -0.82
BRAT1-202ENST00000421712 COA6Q5JTJ3 125 aaKnown RBP9.93□□□□□ -0.82
BRAT1-202ENST00000421712 FAT1Q14517 4588 aa9.93□□□□□ -0.82
BRAT1-202ENST00000421712 DPM2O94777 84 aa9.92□□□□□ -0.82
BRAT1-202ENST00000421712 INAFM2P0DMQ5 153 aa9.92□□□□□ -0.82
BRAT1-202ENST00000421712 FAM168BA1KXE4 195 aa9.9□□□□□ -0.82
BRAT1-202ENST00000421712 SYS1-DBNDD2H3BUS1 97 aa9.9□□□□□ -0.82
BRAT1-202ENST00000421712 IGKCP01834 107 aa9.9□□□□□ -0.82
BRAT1-202ENST00000421712 FAM19A5Q7Z5A7 132 aaPredicted RBP9.9□□□□□ -0.82
BRAT1-202ENST00000421712 ZNF625Q96I27 306 aaPredicted RBP9.9□□□□□ -0.82
BRAT1-202ENST00000421712 PFN2P35080 140 aa9.89□□□□□ -0.83
BRAT1-202ENST00000421712 HERVK_113P61574 105 aa9.89□□□□□ -0.83
BRAT1-202ENST00000421712 SFTA2Q6UW10 78 aa9.89□□□□□ -0.83
BRAT1-202ENST00000421712 XAGE1AQ9HD64 81 aa9.89□□□□□ -0.83
BRAT1-202ENST00000421712 KRTDAPP60985 99 aa9.88□□□□□ -0.83
BRAT1-202ENST00000421712 C9orf129Q5T035 196 aaKnown RBP9.88□□□□□ -0.83
BRAT1-202ENST00000421712 S100A6P06703 90 aa9.87□□□□□ -0.83
BRAT1-202ENST00000421712 PET117Q6UWS5 81 aa9.87□□□□□ -0.83
BRAT1-202ENST00000421712 PHF5AQ7RTV0 110 aaKnown RBP9.87□□□□□ -0.83
BRAT1-202ENST00000421712 ERG28Q9UKR5 140 aa9.86□□□□□ -0.83
BRAT1-202ENST00000421712 C3orf79P0CE67 100 aa9.85□□□□□ -0.83
BRAT1-202ENST00000421712 S100A2P29034 98 aa9.85□□□□□ -0.83
BRAT1-202ENST00000421712 PLEKHB2Q96CS7 222 aa9.85□□□□□ -0.83
BRAT1-202ENST00000421712 M0QXV9 152 aa9.84□□□□□ -0.83
BRAT1-202ENST00000421712 LEPROTO15243 131 aa9.84□□□□□ -0.83
BRAT1-202ENST00000421712 LINC00158P58513 81 aa9.84□□□□□ -0.83
BRAT1-202ENST00000421712 NDUFA12Q9UI09 145 aa9.84□□□□□ -0.83
BRAT1-202ENST00000421712 MYMXA0A1B0GTQ4 84 aa9.83□□□□□ -0.84
BRAT1-202ENST00000421712 COX17Q14061 63 aa9.83□□□□□ -0.84
BRAT1-202ENST00000421712 MEIG1Q5JSS6 88 aa9.83□□□□□ -0.84
BRAT1-202ENST00000421712 LINC01545Q5VT33 79 aa9.83□□□□□ -0.84
BRAT1-202ENST00000421712 ABCA13Q86UQ4 5058 aa9.83□□□□□ -0.84
BRAT1-202ENST00000421712 A0A0U1RRA0 63 aa9.82□□□□□ -0.84
BRAT1-202ENST00000421712 C20orf202A1L168 122 aa9.82□□□□□ -0.84
BRAT1-202ENST00000421712 LGALS3P17931 250 aaKnown RBP9.82□□□□□ -0.84
BRAT1-202ENST00000421712 KRTAP10-4P60372 401 aaPredicted RBP9.82□□□□□ -0.84
BRAT1-202ENST00000421712 HERV-K104P63124 156 aa9.82□□□□□ -0.84
BRAT1-202ENST00000421712 UBE2BP63146 152 aa9.82□□□□□ -0.84
BRAT1-202ENST00000421712 VPS13BQ7Z7G8 4022 aa9.82□□□□□ -0.84
BRAT1-202ENST00000421712 J3QQQ9 107 aa9.81□□□□□ -0.84
BRAT1-202ENST00000421712 SERTAD4-AS1Q5TG53 156 aa9.81□□□□□ -0.84
BRAT1-202ENST00000421712 TSPEAR-AS2P59090 65 aa9.8□□□□□ -0.84
BRAT1-202ENST00000421712 PRR3P79522 188 aaKnown RBP9.8□□□□□ -0.84
BRAT1-202ENST00000421712 KRTAP7-1Q8IUC3 87 aa9.8□□□□□ -0.84
BRAT1-202ENST00000421712 HIST3H2BBQ8N257 126 aa9.8□□□□□ -0.84
BRAT1-202ENST00000421712 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
BRAT1-202ENST00000421712 C22orf24Q9Y442 160 aa9.8□□□□□ -0.84
BRAT1-202ENST00000421712 SRRM2Q9UQ35 2752 aaKnown RBP9.8□□□□□ -0.84
BRAT1-202ENST00000421712 LINC00587B1AMM8 73 aa9.79□□□□□ -0.84
BRAT1-202ENST00000421712 SMIM13P0DJ93 91 aa9.79□□□□□ -0.84
BRAT1-202ENST00000421712 LBHQ53QV2 105 aaPredicted RBP9.79□□□□□ -0.84
BRAT1-202ENST00000421712 E9PLD3 99 aa9.78□□□□□ -0.84
BRAT1-202ENST00000421712 PSORS1C2Q9UIG4 136 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms