RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 LGALS3P17931 250 aaKnown RBP8.12□□□□□ -1.11
TMEM53-206ENST00000420706 CKS1BP61024 79 aa8.12□□□□□ -1.11
TMEM53-206ENST00000420706 SYCNQ0VAF6 134 aa8.12□□□□□ -1.11
TMEM53-206ENST00000420706 C10orf25Q5T742 122 aa8.12□□□□□ -1.11
TMEM53-206ENST00000420706 Q6ZRU5 148 aa8.12□□□□□ -1.11
TMEM53-206ENST00000420706 NMUP48645 174 aa8.11□□□□□ -1.11
TMEM53-206ENST00000420706 CNBPP62633 177 aaKnown RBP8.11□□□□□ -1.11
TMEM53-206ENST00000420706 ZNF625Q96I27 306 aaPredicted RBP8.11□□□□□ -1.11
TMEM53-206ENST00000420706 VAMP8Q9BV40 100 aa8.11□□□□□ -1.11
TMEM53-206ENST00000420706 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
TMEM53-206ENST00000420706 SPATA45Q537H7 98 aa8.1□□□□□ -1.11
TMEM53-206ENST00000420706 CARD19Q96LW7 228 aa8.1□□□□□ -1.11
TMEM53-206ENST00000420706 TTTY13Q9BZ97 58 aa8.1□□□□□ -1.11
TMEM53-206ENST00000420706 C6orf48Q9UBA6 75 aa8.1□□□□□ -1.11
TMEM53-206ENST00000420706 PAM16Q9Y3D7 125 aa8.1□□□□□ -1.11
TMEM53-206ENST00000420706 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.09□□□□□ -1.11
TMEM53-206ENST00000420706 TRBV30A0A0K0K1B3 111 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 MYMXA0A1B0GTQ4 84 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 A0A1B0GVY2 172 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 SMIM6P0DI80 62 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 FUSP35637 526 aaKnown RBP eCLIP8.09□□□□□ -1.11
TMEM53-206ENST00000420706 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 RNF151Q2KHN1 245 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 PCP2Q8IVA1 136 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 C9orf163Q8N9P6 203 aa8.09□□□□□ -1.11
TMEM53-206ENST00000420706 SFTA2Q6UW10 78 aa8.08□□□□□ -1.12
TMEM53-206ENST00000420706 PGPEP1Q9NXJ5 209 aa8.08□□□□□ -1.12
TMEM53-206ENST00000420706 FAT2Q9NYQ8 4349 aa8.07□□□□□ -1.12
TMEM53-206ENST00000420706 IGLV5-52A0A0A0MRZ9 124 aa8.07□□□□□ -1.12
TMEM53-206ENST00000420706 ZNF815PA8K554 130 aa8.07□□□□□ -1.12
TMEM53-206ENST00000420706 HERV-K104P63124 156 aa8.07□□□□□ -1.12
TMEM53-206ENST00000420706 S100A12P80511 92 aa8.07□□□□□ -1.12
TMEM53-206ENST00000420706 C9orf116Q5BN46 136 aaPredicted RBP8.07□□□□□ -1.12
TMEM53-206ENST00000420706 DNAH11Q96DT5 4516 aa8.06□□□□□ -1.12
TMEM53-206ENST00000420706 COX8AP10176 69 aa8.06□□□□□ -1.12
TMEM53-206ENST00000420706 A0A0J9YXY3 114 aa8.05□□□□□ -1.12
TMEM53-206ENST00000420706 BOD1L2Q8IYS8 172 aa8.05□□□□□ -1.12
TMEM53-206ENST00000420706 C14orf144Q96I85 54 aa8.05□□□□□ -1.12
TMEM53-206ENST00000420706 ERG28Q9UKR5 140 aa8.05□□□□□ -1.12
TMEM53-206ENST00000420706 TLX1NBP0CAT3 122 aa8.04□□□□□ -1.12
TMEM53-206ENST00000420706 LINC01620Q4KN68 170 aa8.04□□□□□ -1.12
TMEM53-206ENST00000420706 MEIG1Q5JSS6 88 aa8.04□□□□□ -1.12
TMEM53-206ENST00000420706 EPPK1P58107 5090 aaKnown RBP8.03□□□□□ -1.12
TMEM53-206ENST00000420706 LINC00587B1AMM8 73 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 DLEU1O43261 78 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 SMIM13P0DJ93 91 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 PFN2P35080 140 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 COX17Q14061 63 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 SDIM1Q6ZPB5 146 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 C12orf57Q99622 126 aa8.03□□□□□ -1.12
TMEM53-206ENST00000420706 A0A0U1RRA0 63 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 LOC107984640A0A0U1RRK4 108 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 GCSHP23434 173 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 LINC00158P58513 81 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 LINC00518Q8N0U6 118 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 TP73-AS1Q9UF72 201 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 HECTD4Q9Y4D8 3996 aa8.02□□□□□ -1.13
TMEM53-206ENST00000420706 PKD1P98161 4303 aa8.01□□□□□ -1.13
TMEM53-206ENST00000420706 NDUFC2-KCTD14E9PQ53 114 aa8.01□□□□□ -1.13
TMEM53-206ENST00000420706 SLC25A34Q6PIV7 304 aa8.01□□□□□ -1.13
TMEM53-206ENST00000420706 SCGB1D4Q6XE38 83 aa8.01□□□□□ -1.13
TMEM53-206ENST00000420706 Q6ZRP5 223 aa8.01□□□□□ -1.13
TMEM53-206ENST00000420706 TIMM17BO60830 172 aa8□□□□□ -1.13
TMEM53-206ENST00000420706 RPL18AQ02543 176 aaKnown RBP8□□□□□ -1.13
TMEM53-206ENST00000420706 GAGE2BQ13066 116 aa8□□□□□ -1.13
TMEM53-206ENST00000420706 CIRBPQ14011 172 aaKnown RBP8□□□□□ -1.13
TMEM53-206ENST00000420706 ADAMTSL4-AS1Q5T5F5 129 aa8□□□□□ -1.13
TMEM53-206ENST00000420706 LITAFQ99732 161 aa8□□□□□ -1.13
TMEM53-206ENST00000420706 PKIGQ9Y2B9 76 aa8□□□□□ -1.13
TMEM53-206ENST00000420706 DNAH5Q8TE73 4624 aa7.99□□□□□ -1.13
TMEM53-206ENST00000420706 A0A096LNI7 61 aa7.99□□□□□ -1.13
TMEM53-206ENST00000420706 GAGE2EQ4V326 116 aa7.99□□□□□ -1.13
TMEM53-206ENST00000420706 MIR7-3HGQ8N6C7 128 aa7.99□□□□□ -1.13
TMEM53-206ENST00000420706 GAGE2DQ9UEU5 116 aa7.99□□□□□ -1.13
TMEM53-206ENST00000420706 BIRC6Q9NR09 4857 aa7.98□□□□□ -1.13
TMEM53-206ENST00000420706 C16orf90A8MZG2 172 aa7.98□□□□□ -1.13
TMEM53-206ENST00000420706 PTTG1IPP53801 180 aa7.98□□□□□ -1.13
TMEM53-206ENST00000420706 KRTAP10-1P60331 282 aa7.98□□□□□ -1.13
TMEM53-206ENST00000420706 PRO1933Q9H354 126 aa7.98□□□□□ -1.13
TMEM53-206ENST00000420706 IGKV2-24A0A0C4DH68 120 aa7.97□□□□□ -1.13
TMEM53-206ENST00000420706 DAND5Q8N907 189 aa7.97□□□□□ -1.13
TMEM53-206ENST00000420706 UQCR10Q9UDW1 63 aa7.97□□□□□ -1.13
TMEM53-206ENST00000420706 TMEM238C9JI98 176 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 PANO1I0J062 215 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 CHTF8P0CG12 524 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 C9orf129Q5T035 196 aaKnown RBP7.96□□□□□ -1.14
TMEM53-206ENST00000420706 C2orf91Q6ZV80 131 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 SND1-IT1Q9HBX3 110 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 XAGE1AQ9HD64 81 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 HIGD1BQ9P298 99 aa7.96□□□□□ -1.14
TMEM53-206ENST00000420706 MIEN1Q9BRT3 115 aa7.95□□□□□ -1.14
TMEM53-206ENST00000420706 SPANXDQ9BXN6 97 aa7.95□□□□□ -1.14
TMEM53-206ENST00000420706 SPANXB1Q9NS25 103 aaPredicted RBP7.95□□□□□ -1.14
TMEM53-206ENST00000420706 SPANXCQ9NY87 97 aa7.95□□□□□ -1.14
TMEM53-206ENST00000420706 FAM30AQ9NZY2 134 aa7.95□□□□□ -1.14
TMEM53-206ENST00000420706 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.95□□□□□ -1.14
TMEM53-206ENST00000420706 DNAH8Q96JB1 4490 aa7.95□□□□□ -1.14
TMEM53-206ENST00000420706 LOC107984156A0A0G2JMH3 177 aa7.94□□□□□ -1.14
TMEM53-206ENST00000420706 SOSTDC1Q6X4U4 206 aa7.94□□□□□ -1.14
TMEM53-206ENST00000420706 Q6ZVH6 145 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms