RNA–Protein interactions for RNA: ENST00000419459.1

LINC00642-201, long intergenic non-protein coding RNA 642, humanhuman

TSL 2 BASIC

Gene LINC00642, Length 2,026 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00642-201ENST00000419459 DNAJC30Q96LL9 226 aa9.06□□□□□ -0.96
LINC00642-201ENST00000419459 CELA1Q9UNI1 258 aa9.06□□□□□ -0.96
LINC00642-201ENST00000419459 LINC00526Q96FQ7 95 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 B9D2Q9BPU9 175 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 CSMD3Q7Z407 3707 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 INAFM2P0DMQ5 153 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 MIFP14174 115 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 C9orf153Q5TBE3 101 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 CHCHD7Q9BUK0 85 aa9.05□□□□□ -0.96
LINC00642-201ENST00000419459 A0A0J9YWU9 116 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 SMIM9A6NGZ8 99 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 DEFB130BP0DP73 79 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 DEFB130AP0DP74 79 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 LINC00308Q8TCZ7 52 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 C5orf38Q86SI9 138 aa9.04□□□□□ -0.96
LINC00642-201ENST00000419459 IGHV3-73A0A0B4J1V6 119 aa9.03□□□□□ -0.96
LINC00642-201ENST00000419459 IGLV5-39A0A0G2JS06 123 aa9.03□□□□□ -0.96
LINC00642-201ENST00000419459 NPC2P61916 151 aa9.03□□□□□ -0.96
LINC00642-201ENST00000419459 A0A1B0GX51 115 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 IGHV3-53P01767 116 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 HERVK_113P63121 156 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 DAZ2Q13117 558 aaKnown RBP9.02□□□□□ -0.97
LINC00642-201ENST00000419459 LYSTQ99698 3801 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 CEMP1Q6PRD7 247 aaPredicted RBP9.02□□□□□ -0.97
LINC00642-201ENST00000419459 FAM19A3Q7Z5A8 133 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 CDKN2A-AS1Q9UH64 79 aa9.02□□□□□ -0.97
LINC00642-201ENST00000419459 TRGV2A0A075B6R0 118 aa9.01□□□□□ -0.97
LINC00642-201ENST00000419459 DAZ4Q86SG3 579 aaKnown RBP9.01□□□□□ -0.97
LINC00642-201ENST00000419459 SMCR5Q8TEV8 140 aa9.01□□□□□ -0.97
LINC00642-201ENST00000419459 DAZ3Q9NR90 486 aaKnown RBP9.01□□□□□ -0.97
LINC00642-201ENST00000419459 COX7CP15954 63 aa9□□□□□ -0.97
LINC00642-201ENST00000419459 RNASE13Q5GAN3 156 aaKnown RBP9□□□□□ -0.97
LINC00642-201ENST00000419459 ATOX1O00244 68 aa8.99□□□□□ -0.97
LINC00642-201ENST00000419459 BAALC-AS2P0C853 105 aa8.99□□□□□ -0.97
LINC00642-201ENST00000419459 CRYGAP11844 174 aa8.99□□□□□ -0.97
LINC00642-201ENST00000419459 HIST1H4AP62805 103 aaKnown RBP8.99□□□□□ -0.97
LINC00642-201ENST00000419459 Q9H8V8 135 aa8.99□□□□□ -0.97
LINC00642-201ENST00000419459 J3KT08 172 aa8.98□□□□□ -0.97
LINC00642-201ENST00000419459 RPS28P62857 69 aaKnown RBP8.98□□□□□ -0.97
LINC00642-201ENST00000419459 C11orf68Q9H3H3 251 aaKnown RBP8.98□□□□□ -0.97
LINC00642-201ENST00000419459 TENM2Q9NT68 2774 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.97□□□□□ -0.97
LINC00642-201ENST00000419459 IGKV2-29A2NJV5 120 aaPredicted RBP8.97□□□□□ -0.97
LINC00642-201ENST00000419459 SPART-AS1P0CW21 52 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 LINC00694P0DN24 101 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 DAD1P61803 113 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 DGAT2L7PQ6IED9 249 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 Q9UF83 564 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 DNAH7Q8WXX0 4024 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 LYRM9A8MSI8 78 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 HTN3P15516 51 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 NANOS2P60321 138 aaKnown RBP8.97□□□□□ -0.97
LINC00642-201ENST00000419459 Q6ZSN1 163 aa8.97□□□□□ -0.97
LINC00642-201ENST00000419459 CSDC2Q9Y534 153 aaKnown RBP8.97□□□□□ -0.97
LINC00642-201ENST00000419459 Q6ZTC4 211 aa8.96□□□□□ -0.98
LINC00642-201ENST00000419459 LINC00612Q8N6U2 182 aa8.96□□□□□ -0.98
LINC00642-201ENST00000419459 TRAV13-2A0A0B4J235 113 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 RPL28P46779 137 aaKnown RBP8.95□□□□□ -0.98
LINC00642-201ENST00000419459 ZNF625Q96I27 306 aaPredicted RBP8.95□□□□□ -0.98
LINC00642-201ENST00000419459 SMIM1B2RUZ4 78 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 LINC00242Q5T6M2 205 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 SOSTDC1Q6X4U4 206 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 C11orf45Q8TAV5 145 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 C22orf24Q9Y442 160 aa8.95□□□□□ -0.98
LINC00642-201ENST00000419459 RS1O15537 224 aa8.94□□□□□ -0.98
LINC00642-201ENST00000419459 MALP21145 153 aa8.94□□□□□ -0.98
LINC00642-201ENST00000419459 C2orf48Q96LS8 159 aa8.94□□□□□ -0.98
LINC00642-201ENST00000419459 COX6A2Q02221 97 aa8.93□□□□□ -0.98
LINC00642-201ENST00000419459 GAGE2AQ6NT46 116 aa8.93□□□□□ -0.98
LINC00642-201ENST00000419459 TRGV4A0A0C4DH28 118 aa8.92□□□□□ -0.98
LINC00642-201ENST00000419459 C5orf47Q569G3 176 aa8.92□□□□□ -0.98
LINC00642-201ENST00000419459 DNAL4O96015 105 aa8.92□□□□□ -0.98
LINC00642-201ENST00000419459 RPL18AQ02543 176 aaKnown RBP8.92□□□□□ -0.98
LINC00642-201ENST00000419459 FHL2Q14192 279 aa8.92□□□□□ -0.98
LINC00642-201ENST00000419459 Q6JHZ5 121 aa8.92□□□□□ -0.98
LINC00642-201ENST00000419459 STARD9Q9P2P6 4700 aa8.91□□□□□ -0.98
LINC00642-201ENST00000419459 LOC100131303A0A0U1RQF7 123 aa8.91□□□□□ -0.98
LINC00642-201ENST00000419459 F5H768 121 aa8.91□□□□□ -0.98
LINC00642-201ENST00000419459 CRPP02741 224 aa8.91□□□□□ -0.98
LINC00642-201ENST00000419459 FAM218AQ96MZ4 157 aa8.91□□□□□ -0.98
LINC00642-201ENST00000419459 H0YGX0 51 aa8.9□□□□□ -0.98
LINC00642-201ENST00000419459 TMEM258P61165 79 aa8.9□□□□□ -0.98
LINC00642-201ENST00000419459 OBSCN-AS1Q96MR7 158 aa8.9□□□□□ -0.99
LINC00642-201ENST00000419459 IGHV3-38A0A0C4DH36 116 aa8.88□□□□□ -0.99
LINC00642-201ENST00000419459 TRBV10-1A0A0K0K1A3 114 aa8.88□□□□□ -0.99
LINC00642-201ENST00000419459 OR13C6PQ8NH95 151 aa8.88□□□□□ -0.99
LINC00642-201ENST00000419459 K7EQD1 137 aa8.88□□□□□ -0.99
LINC00642-201ENST00000419459 SERP2Q8N6R1 65 aa8.88□□□□□ -0.99
LINC00642-201ENST00000419459 DEFB131BA0A096LNP1 70 aa8.87□□□□□ -0.99
LINC00642-201ENST00000419459 A0A096LPF7 62 aa8.87□□□□□ -0.99
LINC00642-201ENST00000419459 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
LINC00642-201ENST00000419459 FAM19A5Q7Z5A7 132 aaPredicted RBP8.87□□□□□ -0.99
LINC00642-201ENST00000419459 PRO0255Q9UI72 69 aa8.87□□□□□ -0.99
LINC00642-201ENST00000419459 KLK5Q9Y337 293 aaPredicted RBP8.87□□□□□ -0.99
LINC00642-201ENST00000419459 RPL36AP83881 106 aaKnown RBP8.86□□□□□ -0.99
LINC00642-201ENST00000419459 RPL36ALQ969Q0 106 aaKnown RBP8.86□□□□□ -0.99
LINC00642-201ENST00000419459 CDC42SE2Q9NRR3 84 aa8.86□□□□□ -0.99
LINC00642-201ENST00000419459 PLECQ15149 4684 aaKnown RBP8.86□□□□□ -0.99
LINC00642-201ENST00000419459 TRBV6-4A0A1B0GX49 114 aa8.85□□□□□ -0.99
LINC00642-201ENST00000419459 PAX4O43316 350 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms