RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 PDZD11Q5EBL8 140 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 LINC00242Q5T6M2 205 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 SERTAD4-AS1Q5TG53 156 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 KRTAP26-1Q6PEX3 210 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 MAP1LC3CQ9BXW4 147 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 PKD1P98161 4303 aa4.39□□□□□ -1.71
LINC02539-202ENST00000419220 TRBV30A0A0K0K1B3 111 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 LINC00587B1AMM8 73 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 ATP6V1G1O75348 118 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 Q8IZM0 81 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 C15orf56Q8N910 161 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 TOMM7Q9P0U1 55 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 CHTOPQ9Y3Y2 248 aaKnown RBP4.38□□□□□ -1.71
LINC02539-202ENST00000419220 FAT2Q9NYQ8 4349 aa4.38□□□□□ -1.71
LINC02539-202ENST00000419220 A0A0J9YXV3 536 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 SERF1AO75920 110 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 PLNP26678 52 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 HERVK_113P61574 105 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 PMCHL1Q16048 86 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 TMEM170BQ5T4T1 132 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 CHAC1Q9BUX1 264 aa4.37□□□□□ -1.71
LINC02539-202ENST00000419220 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
LINC02539-202ENST00000419220 C20orf202A1L168 122 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 F8VRH5 84 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 SCO1O75880 301 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 IGLC3P0DOY3 106 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 FABP4P15090 132 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 S100A2P29034 98 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 WFDC2Q14508 124 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 FAM19A2Q8N3H0 131 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 COX7B2Q8TF08 81 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 C7orf33Q8WU49 177 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 CDKN2A-AS1Q9UH64 79 aa4.36□□□□□ -1.71
LINC02539-202ENST00000419220 IGLV5-45A0A087WSX0 123 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 H0Y8G0 127 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BKO60814 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BJP06899 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BOP23527 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BBP33778 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BDP58876 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 KRTAP10-1P60331 282 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BCP62807 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 COX6A2Q02221 97 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 RPL18AQ02543 176 aaKnown RBP4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST2H2BEQ16778 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.35□□□□□ -1.71
LINC02539-202ENST00000419220 SDIM1Q6ZPB5 146 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 LINC00173Q6ZV60 143 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BHQ93079 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BNQ99877 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 HIST1H2BMQ99879 126 aa4.35□□□□□ -1.71
LINC02539-202ENST00000419220 EPM2AB3EWF7 344 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 DPM2O94777 84 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 GAGE2BQ13066 116 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 COX17Q14061 63 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 MAJINQ3KP22 176 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 FAM104AQ969W3 186 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 URB1-AS1Q96HZ7 61 aa4.34□□□□□ -1.71
LINC02539-202ENST00000419220 PKHD1P08F94 4074 aa4.34□□□□□ -1.72
LINC02539-202ENST00000419220 A0A096LNJ9 63 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 IGKV2-24A0A0C4DH68 120 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 C11orf86A6NJI1 115 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 NDUFC2-KCTD14E9PQ53 114 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 IGKCP01834 107 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 SPINK8P0C7L1 97 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 HERV-K104P63124 156 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 CIRBPQ14011 172 aaKnown RBP4.33□□□□□ -1.72
LINC02539-202ENST00000419220 C10orf25Q5T742 122 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 ZC2HC1BQ5TFG8 222 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 PET117Q6UWS5 81 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 Q6ZRU5 148 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 PLEKHB2Q96CS7 222 aa4.33□□□□□ -1.72
LINC02539-202ENST00000419220 MYMXA0A1B0GTQ4 84 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 SMIM1B2RUZ4 78 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 ZNF22P17026 224 aaPredicted RBP4.32□□□□□ -1.72
LINC02539-202ENST00000419220 FUSP35637 526 aaKnown RBP eCLIP4.32□□□□□ -1.72
LINC02539-202ENST00000419220 NMUP48645 174 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 COA6Q5JTJ3 125 aaKnown RBP4.32□□□□□ -1.72
LINC02539-202ENST00000419220 UNQ6190/PRO20217Q6UXQ8 127 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 Q6ZSA8 131 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 STPG4Q8N801 248 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 LINC00526Q96FQ7 95 aa4.32□□□□□ -1.72
LINC02539-202ENST00000419220 EPPK1P58107 5090 aaKnown RBP4.32□□□□□ -1.72
LINC02539-202ENST00000419220 LGALS3P17931 250 aaKnown RBP4.31□□□□□ -1.72
LINC02539-202ENST00000419220 SNRPEP62304 92 aaKnown RBP4.31□□□□□ -1.72
LINC02539-202ENST00000419220 S100A12P80511 92 aa4.31□□□□□ -1.72
LINC02539-202ENST00000419220 KIAA0087Q14695 138 aa4.31□□□□□ -1.72
LINC02539-202ENST00000419220 LINC01620Q4KN68 170 aa4.31□□□□□ -1.72
LINC02539-202ENST00000419220 LBHQ53QV2 105 aaPredicted RBP4.31□□□□□ -1.72
LINC02539-202ENST00000419220 SPACA4Q8TDM5 124 aa4.31□□□□□ -1.72
LINC02539-202ENST00000419220 COPS9Q8WXC6 57 aa4.31□□□□□ -1.72
LINC02539-202ENST00000419220 A0A087WYN8 130 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 IGLV5-39A0A0G2JS06 123 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 TMEM223A0PJW6 202 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 HSBP1L1C9JCN9 74 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 SYS1-DBNDD2H3BUS1 97 aa4.3□□□□□ -1.72
LINC02539-202ENST00000419220 LEPROTO15243 131 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms