RNA–Protein interactions for RNA: ENST00000417702.5

NUP50-204, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 584 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-204ENST00000417702 PRSS2P07478 247 aa9.54□□□□□ -0.88
NUP50-204ENST00000417702 TLX1NBP0CAT3 122 aa9.54□□□□□ -0.88
NUP50-204ENST00000417702 HERVK_113P63121 156 aa9.54□□□□□ -0.88
NUP50-204ENST00000417702 PMVKQ15126 192 aa9.54□□□□□ -0.88
NUP50-204ENST00000417702 PACRGQ96M98 296 aaPredicted RBP9.54□□□□□ -0.88
NUP50-204ENST00000417702 CST9LQ9H4G1 147 aa9.54□□□□□ -0.88
NUP50-204ENST00000417702 GEMIN7Q9H840 131 aaKnown RBP9.54□□□□□ -0.88
NUP50-204ENST00000417702 TRBV30A0A0K0K1B3 111 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 HSBP1O75506 76 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 ATP5LO75964 103 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 S100A1P23297 94 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 PDZD11Q5EBL8 140 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 SERTAD4-AS1Q5TG53 156 aa9.53□□□□□ -0.88
NUP50-204ENST00000417702 GAGE2EQ4V326 116 aa9.52□□□□□ -0.89
NUP50-204ENST00000417702 C2orf82Q6UX34 121 aa9.52□□□□□ -0.89
NUP50-204ENST00000417702 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
NUP50-204ENST00000417702 GAGE2DQ9UEU5 116 aa9.52□□□□□ -0.89
NUP50-204ENST00000417702 TINCRA0A1B0GVN0 87 aa9.51□□□□□ -0.89
NUP50-204ENST00000417702 NDUFA6P56556 154 aa9.51□□□□□ -0.89
NUP50-204ENST00000417702 CKS1BP61024 79 aa9.51□□□□□ -0.89
NUP50-204ENST00000417702 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
NUP50-204ENST00000417702 PKHD1L1Q86WI1 4243 aa9.5□□□□□ -0.89
NUP50-204ENST00000417702 FAT3Q8TDW7 4589 aa9.5□□□□□ -0.89
NUP50-204ENST00000417702 SPINK6Q6UWN8 80 aa9.5□□□□□ -0.89
NUP50-204ENST00000417702 CDKN2A-AS1Q9UH64 79 aa9.5□□□□□ -0.89
NUP50-204ENST00000417702 NDUFC2-KCTD14E9PQ53 114 aa9.49□□□□□ -0.89
NUP50-204ENST00000417702 PHF5AQ7RTV0 110 aaKnown RBP9.49□□□□□ -0.89
NUP50-204ENST00000417702 Q8IZM0 81 aa9.49□□□□□ -0.89
NUP50-204ENST00000417702 LINC00469Q8N7U9 141 aa9.49□□□□□ -0.89
NUP50-204ENST00000417702 ATP6V1G1O75348 118 aa9.48□□□□□ -0.89
NUP50-204ENST00000417702 SERF1AO75920 110 aa9.48□□□□□ -0.89
NUP50-204ENST00000417702 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 MT1HL1P0DM35 61 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 REG3GQ6UW15 175 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 FAM19A5Q7Z5A7 132 aaPredicted RBP9.47□□□□□ -0.89
NUP50-204ENST00000417702 FAM19A2Q8N3H0 131 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 IFI27L1Q96BM0 104 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 PSORS1C2Q9UIG4 136 aa9.47□□□□□ -0.89
NUP50-204ENST00000417702 IGLV5-45A0A087WSX0 123 aa9.46□□□□□ -0.9
NUP50-204ENST00000417702 IGLC3P0DOY3 106 aa9.46□□□□□ -0.9
NUP50-204ENST00000417702 SRSF9Q13242 221 aaKnown RBP eCLIP9.46□□□□□ -0.9
NUP50-204ENST00000417702 H3BRM9 83 aa9.45□□□□□ -0.9
NUP50-204ENST00000417702 CXCL5P42830 114 aa9.45□□□□□ -0.9
NUP50-204ENST00000417702 LINC00310P59036 64 aa9.45□□□□□ -0.9
NUP50-204ENST00000417702 C1orf137Q5JT78 98 aa9.45□□□□□ -0.9
NUP50-204ENST00000417702 LINC01600Q96MT4 127 aa9.45□□□□□ -0.9
NUP50-204ENST00000417702 TRAV12-1A0A0B4J245 112 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 F8VRH5 84 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BKO60814 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 LEPROTL1O95214 131 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BJP06899 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BOP23527 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BBP33778 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BDP58876 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BCP62807 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST2H2BEQ16778 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BHQ93079 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BNQ99877 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 HIST1H2BMQ99879 126 aa9.44□□□□□ -0.9
NUP50-204ENST00000417702 SMIM1B2RUZ4 78 aa9.43□□□□□ -0.9
NUP50-204ENST00000417702 M0QXV9 152 aa9.43□□□□□ -0.9
NUP50-204ENST00000417702 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
NUP50-204ENST00000417702 CHTOPQ9Y3Y2 248 aaKnown RBP9.43□□□□□ -0.9
NUP50-204ENST00000417702 NUPR1O60356 82 aa9.42□□□□□ -0.9
NUP50-204ENST00000417702 UBE2BP63146 152 aa9.42□□□□□ -0.9
NUP50-204ENST00000417702 C9orf129Q5T035 196 aaKnown RBP9.42□□□□□ -0.9
NUP50-204ENST00000417702 COX7B2Q8TF08 81 aa9.42□□□□□ -0.9
NUP50-204ENST00000417702 HSPB8Q9UJY1 196 aa9.42□□□□□ -0.9
NUP50-204ENST00000417702 SPINK8P0C7L1 97 aa9.41□□□□□ -0.9
NUP50-204ENST00000417702 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
NUP50-204ENST00000417702 FABP4P15090 132 aa9.4□□□□□ -0.9
NUP50-204ENST00000417702 KRTAP7-1Q8IUC3 87 aa9.4□□□□□ -0.9
NUP50-204ENST00000417702 C11orf86A6NJI1 115 aa9.39□□□□□ -0.91
NUP50-204ENST00000417702 IGLV7-43P04211 117 aa9.39□□□□□ -0.91
NUP50-204ENST00000417702 TMEM170BQ5T4T1 132 aa9.39□□□□□ -0.91
NUP50-204ENST00000417702 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
NUP50-204ENST00000417702 H0Y8G0 127 aa9.38□□□□□ -0.91
NUP50-204ENST00000417702 KRTAP11-1Q8IUC1 163 aa9.38□□□□□ -0.91
NUP50-204ENST00000417702 DIRC1Q969H9 104 aa9.37□□□□□ -0.91
NUP50-204ENST00000417702 IGLV5-39A0A0G2JS06 123 aa9.36□□□□□ -0.91
NUP50-204ENST00000417702 LBHQ53QV2 105 aaPredicted RBP9.36□□□□□ -0.91
NUP50-204ENST00000417702 MAP1LC3CQ9BXW4 147 aa9.36□□□□□ -0.91
NUP50-204ENST00000417702 ODF1Q14990 250 aa9.35□□□□□ -0.91
NUP50-204ENST00000417702 COA6Q5JTJ3 125 aaKnown RBP9.35□□□□□ -0.91
NUP50-204ENST00000417702 C22orf24Q9Y442 160 aa9.35□□□□□ -0.91
NUP50-204ENST00000417702 KRTAP10-8P60410 259 aa9.34□□□□□ -0.91
NUP50-204ENST00000417702 TMEM223A0PJW6 202 aa9.33□□□□□ -0.92
NUP50-204ENST00000417702 PLNP26678 52 aa9.32□□□□□ -0.92
NUP50-204ENST00000417702 TP73-AS1Q9UF72 201 aa9.32□□□□□ -0.92
NUP50-204ENST00000417702 HMCN2Q8NDA2 5059 aa9.32□□□□□ -0.92
NUP50-204ENST00000417702 H0Y9J4 135 aa9.31□□□□□ -0.92
NUP50-204ENST00000417702 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
NUP50-204ENST00000417702 MRPL55Q7Z7F7 128 aaKnown RBP9.31□□□□□ -0.92
NUP50-204ENST00000417702 DPM2O94777 84 aa9.3□□□□□ -0.92
NUP50-204ENST00000417702 SYS1-DBNDD2H3BUS1 97 aa9.29□□□□□ -0.92
NUP50-204ENST00000417702 IGKCP01834 107 aa9.29□□□□□ -0.92
NUP50-204ENST00000417702 PFN2P35080 140 aa9.28□□□□□ -0.92
NUP50-204ENST00000417702 PMCHL2Q9BQD1 86 aa9.28□□□□□ -0.92
NUP50-204ENST00000417702 TNXBP22105 4242 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms