RNA–Protein interactions for RNA: ENST00000417545.4

TRIM48-201, Transcript of tripartite motif containing 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM48, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48-201ENST00000417545 S100A12P80511 92 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 COX7B2Q8TF08 81 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 NTN5Q8WTR8 489 aaPredicted RBP5.57□□□□□ -1.52
TRIM48-201ENST00000417545 CXCL5P42830 114 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 Q8IZM0 81 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 LINC00526Q96FQ7 95 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 CARD19Q96LW7 228 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 PKIGQ9Y2B9 76 aa5.57□□□□□ -1.52
TRIM48-201ENST00000417545 KMT2CQ8NEZ4 4911 aaKnown RBP5.56□□□□□ -1.52
TRIM48-201ENST00000417545 TMEM223A0PJW6 202 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 F8WDY8 70 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 LGALS3P17931 250 aaKnown RBP5.56□□□□□ -1.52
TRIM48-201ENST00000417545 SYCNQ0VAF6 134 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 LCE1DQ5T752 114 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 CDPF1Q6NVV7 123 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 ATOH7Q8N100 152 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 PLEKHB2Q96CS7 222 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 C2orf48Q96LS8 159 aa5.56□□□□□ -1.52
TRIM48-201ENST00000417545 CTAG1AP78358 180 aa5.55□□□□□ -1.52
TRIM48-201ENST00000417545 FRAS1Q86XX4 4008 aa5.55□□□□□ -1.52
TRIM48-201ENST00000417545 C16orf90A8MZG2 172 aa5.54□□□□□ -1.52
TRIM48-201ENST00000417545 LEPROTO15243 131 aa5.54□□□□□ -1.52
TRIM48-201ENST00000417545 SFTA2Q6UW10 78 aa5.54□□□□□ -1.52
TRIM48-201ENST00000417545 FUSP35637 526 aaKnown RBP eCLIP5.53□□□□□ -1.52
TRIM48-201ENST00000417545 NMUP48645 174 aa5.53□□□□□ -1.52
TRIM48-201ENST00000417545 CNBPP62633 177 aaKnown RBP5.53□□□□□ -1.52
TRIM48-201ENST00000417545 Q6ZRU5 148 aa5.53□□□□□ -1.52
TRIM48-201ENST00000417545 LINC00518Q8N0U6 118 aa5.53□□□□□ -1.52
TRIM48-201ENST00000417545 IGLV5-39A0A0G2JS06 123 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 TRBV30A0A0K0K1B3 111 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 MYMXA0A1B0GTQ4 84 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 J3QQQ9 107 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 GCSHP23434 173 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 KRTAP10-2P60368 255 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 RPL18AQ02543 176 aaKnown RBP5.52□□□□□ -1.53
TRIM48-201ENST00000417545 MEIG1Q5JSS6 88 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 C2orf82Q6UX34 121 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 UNQ6190/PRO20217Q6UXQ8 127 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 STPG4Q8N801 248 aa5.52□□□□□ -1.53
TRIM48-201ENST00000417545 LOC107984640A0A0U1RRK4 108 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 E9PLD3 99 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 KIAA0087Q14695 138 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 DPH3Q96FX2 82 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 ZNF625Q96I27 306 aaPredicted RBP5.51□□□□□ -1.53
TRIM48-201ENST00000417545 VAMP8Q9BV40 100 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 NDUFA12Q9UI09 145 aa5.51□□□□□ -1.53
TRIM48-201ENST00000417545 HERV-K104P63124 156 aa5.5□□□□□ -1.53
TRIM48-201ENST00000417545 JOSD1Q15040 202 aaPredicted RBP5.5□□□□□ -1.53
TRIM48-201ENST00000417545 LINC01620Q4KN68 170 aa5.5□□□□□ -1.53
TRIM48-201ENST00000417545 C9orf163Q8N9P6 203 aa5.5□□□□□ -1.53
TRIM48-201ENST00000417545 DNAH10Q8IVF4 4471 aa5.5□□□□□ -1.53
TRIM48-201ENST00000417545 IGKV2-24A0A0C4DH68 120 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 A0A1B0GVY2 172 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 ZNF815PA8K554 130 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 LINC00587B1AMM8 73 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 PFN2P35080 140 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 GAGE2BQ13066 116 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 RNF151Q2KHN1 245 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 C10orf25Q5T742 122 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 C6orf48Q9UBA6 75 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 RYR3Q15413 4870 aa5.49□□□□□ -1.53
TRIM48-201ENST00000417545 LINC00158P58513 81 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 CIRBPQ14011 172 aaKnown RBP5.48□□□□□ -1.53
TRIM48-201ENST00000417545 GAGE2EQ4V326 116 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 ANKRD39Q53RE8 183 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 SCGB1D4Q6XE38 83 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 GAGE2DQ9UEU5 116 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 ERG28Q9UKR5 140 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 PAM16Q9Y3D7 125 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 A0A0U1RRA0 63 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 SLPIP03973 132 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 TSPEAR-AS2P59090 65 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 MAJINQ3KP22 176 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 SPATA45Q537H7 98 aa5.48□□□□□ -1.53
TRIM48-201ENST00000417545 C9orf116Q5BN46 136 aaPredicted RBP5.48□□□□□ -1.53
TRIM48-201ENST00000417545 DNAH2Q9P225 4427 aa5.47□□□□□ -1.53
TRIM48-201ENST00000417545 NDUFC2-KCTD14E9PQ53 114 aa5.47□□□□□ -1.53
TRIM48-201ENST00000417545 LINC00474Q9P2X8 69 aa5.47□□□□□ -1.53
TRIM48-201ENST00000417545 DNAH17Q9UFH2 4485 aa5.46□□□□□ -1.54
TRIM48-201ENST00000417545 IGKV2D-26A0A0A0MRZ7 120 aa5.46□□□□□ -1.54
TRIM48-201ENST00000417545 COX17Q14061 63 aa5.46□□□□□ -1.54
TRIM48-201ENST00000417545 PYY3Q5JQD4 70 aa5.46□□□□□ -1.54
TRIM48-201ENST00000417545 MIEN1Q9BRT3 115 aa5.46□□□□□ -1.54
TRIM48-201ENST00000417545 A0A096LNI7 61 aa5.45□□□□□ -1.54
TRIM48-201ENST00000417545 TLX1NBP0CAT3 122 aa5.45□□□□□ -1.54
TRIM48-201ENST00000417545 SMIM6P0DI80 62 aa5.45□□□□□ -1.54
TRIM48-201ENST00000417545 SMIM13P0DJ93 91 aa5.45□□□□□ -1.54
TRIM48-201ENST00000417545 PTTG1IPP53801 180 aa5.45□□□□□ -1.54
TRIM48-201ENST00000417545 A0A0J9YXY3 114 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 TMEM238C9JI98 176 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 CHTF8P0CG12 524 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 KRTAP10-1P60331 282 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 SDIM1Q6ZPB5 146 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 Q6ZRP5 223 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 C12orf57Q99622 126 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 TTTY13Q9BZ97 58 aa5.44□□□□□ -1.54
TRIM48-201ENST00000417545 PCP2Q8IVA1 136 aa5.43□□□□□ -1.54
TRIM48-201ENST00000417545 MIR7-3HGQ8N6C7 128 aa5.43□□□□□ -1.54
TRIM48-201ENST00000417545 XAGE1AQ9HD64 81 aa5.43□□□□□ -1.54
TRIM48-201ENST00000417545 FAM229AH3BQW9 127 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms