RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521		A0A087WYN8	130 aa		10.41	□□□□□ -0.74
DDR1-231	ENST00000417521	C11orf86	A6NJI1	115 aa		10.41	□□□□□ -0.74
DDR1-231	ENST00000417521	ZNF561-AS1	K7EIQ3	104 aa		10.41	□□□□□ -0.74
DDR1-231	ENST00000417521	CHTF8	P0CG12	524 aa		10.41	□□□□□ -0.74
DDR1-231	ENST00000417521	RPL37A	P61513	92 aa	Known RBP	10.41	□□□□□ -0.74
DDR1-231	ENST00000417521	SPAG11B	Q08648	103 aa		10.4	□□□□□ -0.74
DDR1-231	ENST00000417521	ODF1	Q14990	250 aa		10.4	□□□□□ -0.74
DDR1-231	ENST00000417521	PACRG	Q96M98	296 aa	Predicted RBP	10.4	□□□□□ -0.74
DDR1-231	ENST00000417521	MAP1LC3C	Q9BXW4	147 aa		10.4	□□□□□ -0.74
DDR1-231	ENST00000417521	PKIG	Q9Y2B9	76 aa		10.4	□□□□□ -0.74
DDR1-231	ENST00000417521		F8VRH5	84 aa		10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	ZNF22	P17026	224 aa	Predicted RBP	10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	LINC01561	Q8N1V8	128 aa		10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	HIST3H2BB	Q8N257	126 aa		10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	OR10D4P	Q8NGN7	298 aa		10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	PLAC8	Q9NZF1	115 aa		10.39	□□□□□ -0.75
DDR1-231	ENST00000417521	SPINK8	P0C7L1	97 aa		10.38	□□□□□ -0.75
DDR1-231	ENST00000417521	SYCN	Q0VAF6	134 aa		10.38	□□□□□ -0.75
DDR1-231	ENST00000417521	CARD19	Q96LW7	228 aa		10.38	□□□□□ -0.75
DDR1-231	ENST00000417521	PMCHL2	Q9BQD1	86 aa		10.38	□□□□□ -0.75
DDR1-231	ENST00000417521	KRTAP29-1	A8MX34	341 aa	Predicted RBP	10.37	□□□□□ -0.75
DDR1-231	ENST00000417521	SMIM1	B2RUZ4	78 aa		10.37	□□□□□ -0.75
DDR1-231	ENST00000417521	SNRPE	P62304	92 aa	Known RBP	10.37	□□□□□ -0.75
DDR1-231	ENST00000417521	SYS1-DBNDD2	H3BUS1	97 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	KIAA0087	Q14695	138 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	TMEM170B	Q5T4T1	132 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	LINC00474	Q9P2X8	69 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	IGKV2-24	A0A0C4DH68	120 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521		H3BRM9	83 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521		J3QL48	77 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	S100A2	P29034	98 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	MAJIN	Q3KP22	176 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	TOMM7	Q9P0U1	55 aa		10.36	□□□□□ -0.75
DDR1-231	ENST00000417521	C3orf79	P0CE67	100 aa		10.35	□□□□□ -0.75
DDR1-231	ENST00000417521	KRTDAP	P60985	99 aa		10.35	□□□□□ -0.75
DDR1-231	ENST00000417521	C2orf48	Q96LS8	159 aa		10.35	□□□□□ -0.75
DDR1-231	ENST00000417521	CAMK2N2	Q96S95	79 aa		10.35	□□□□□ -0.75
DDR1-231	ENST00000417521	HIST1H2BL	Q99880	126 aa		10.35	□□□□□ -0.75
DDR1-231	ENST00000417521	TMA7	Q9Y2S6	64 aa	Known RBP	10.35	□□□□□ -0.75
DDR1-231	ENST00000417521		A0A096LNI7	61 aa		10.34	□□□□□ -0.75
DDR1-231	ENST00000417521		Q6ZRU5	148 aa		10.34	□□□□□ -0.75
DDR1-231	ENST00000417521	STPG4	Q8N801	248 aa		10.34	□□□□□ -0.75
DDR1-231	ENST00000417521	C5orf52	A6NGY3	159 aa		10.33	□□□□□ -0.76
DDR1-231	ENST00000417521	PRSS2	P07478	247 aa		10.33	□□□□□ -0.76
DDR1-231	ENST00000417521	C2orf82	Q6UX34	121 aa		10.33	□□□□□ -0.76
DDR1-231	ENST00000417521	DPM2	O94777	84 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	PLN	P26678	52 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	C10orf25	Q5T742	122 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	PET117	Q6UWS5	81 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	UNQ6190/PRO20217	Q6UXQ8	127 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	C7orf33	Q8WU49	177 aa		10.32	□□□□□ -0.76
DDR1-231	ENST00000417521	TMEM223	A0PJW6	202 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521	OXT	P01178	125 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521	C6orf226	Q5I0X4	101 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521	LINC01545	Q5VT33	79 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521		Q8IZM0	81 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521	COX7B2	Q8TF08	81 aa		10.31	□□□□□ -0.76
DDR1-231	ENST00000417521	IGLV5-39	A0A0G2JS06	123 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	LOC107984640	A0A0U1RRK4	108 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521		F8WDY8	70 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	NDUFA1	O15239	70 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	IGKC	P01834	107 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	LRP1	Q07954	4544 aa	Known RBP	10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	HNRNPA3	P51991	378 aa	Known RBP	10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	CKS1B	P61024	79 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	RNF151	Q2KHN1	245 aa		10.3	□□□□□ -0.76
DDR1-231	ENST00000417521	PTTG1IP	P53801	180 aa		10.29	□□□□□ -0.76
DDR1-231	ENST00000417521	C6orf48	Q9UBA6	75 aa		10.29	□□□□□ -0.76
DDR1-231	ENST00000417521	FAT3	Q8TDW7	4589 aa		10.27	□□□□□ -0.76
DDR1-231	ENST00000417521	GAGE2B	Q13066	116 aa		10.27	□□□□□ -0.77
DDR1-231	ENST00000417521	PKHD1L1	Q86WI1	4243 aa		10.26	□□□□□ -0.77
DDR1-231	ENST00000417521	C9orf116	Q5BN46	136 aa	Predicted RBP	10.25	□□□□□ -0.77
DDR1-231	ENST00000417521	C20orf202	A1L168	122 aa		10.24	□□□□□ -0.77
DDR1-231	ENST00000417521	CXCL5	P42830	114 aa		10.24	□□□□□ -0.77
DDR1-231	ENST00000417521	TRBV30	A0A0K0K1B3	111 aa		10.23	□□□□□ -0.77
DDR1-231	ENST00000417521	RPL18A	Q02543	176 aa	Known RBP	10.23	□□□□□ -0.77
DDR1-231	ENST00000417521	ATOH7	Q8N100	152 aa		10.23	□□□□□ -0.77
DDR1-231	ENST00000417521	AKR1D1	P51857	326 aa		10.22	□□□□□ -0.77
DDR1-231	ENST00000417521	TSPEAR-AS2	P59090	65 aa		10.22	□□□□□ -0.77
DDR1-231	ENST00000417521	HERVK_113	P61574	105 aa		10.22	□□□□□ -0.77
DDR1-231	ENST00000417521	PRR3	P79522	188 aa	Known RBP	10.22	□□□□□ -0.77
DDR1-231	ENST00000417521		A0A1W2PNN7	141 aa		10.21	□□□□□ -0.78
DDR1-231	ENST00000417521	LEPROT	O15243	131 aa		10.21	□□□□□ -0.78
DDR1-231	ENST00000417521	TLX1NB	P0CAT3	122 aa		10.21	□□□□□ -0.78
DDR1-231	ENST00000417521	ZNF625	Q96I27	306 aa	Predicted RBP	10.21	□□□□□ -0.78
DDR1-231	ENST00000417521		Q6ZRP5	223 aa		10.2	□□□□□ -0.78
DDR1-231	ENST00000417521	PLEKHB2	Q96CS7	222 aa		10.19	□□□□□ -0.78
DDR1-231	ENST00000417521		E9PLD3	99 aa		10.18	□□□□□ -0.78
DDR1-231	ENST00000417521		J3QQQ9	107 aa		10.18	□□□□□ -0.78
DDR1-231	ENST00000417521	GAGE2E	Q4V326	116 aa		10.18	□□□□□ -0.78
DDR1-231	ENST00000417521	GAGE2D	Q9UEU5	116 aa		10.18	□□□□□ -0.78
DDR1-231	ENST00000417521	NDUFC2-KCTD14	E9PQ53	114 aa		10.17	□□□□□ -0.78
DDR1-231	ENST00000417521	NDUFA12	Q9UI09	145 aa		10.17	□□□□□ -0.78
DDR1-231	ENST00000417521	IGKV2D-26	A0A0A0MRZ7	120 aa		10.17	□□□□□ -0.78
DDR1-231	ENST00000417521	SCGB1D1	O95968	90 aa		10.17	□□□□□ -0.78
DDR1-231	ENST00000417521	LGALS3	P17931	250 aa	Known RBP	10.16	□□□□□ -0.78
DDR1-231	ENST00000417521	PFN2	P35080	140 aa		10.16	□□□□□ -0.78
DDR1-231	ENST00000417521	SERTAD4-AS1	Q5TG53	156 aa		10.16	□□□□□ -0.78
DDR1-231	ENST00000417521	ANKRD39	Q53RE8	183 aa		10.15	□□□□□ -0.78
DDR1-231	ENST00000417521	SFTA2	Q6UW10	78 aa		10.15	□□□□□ -0.78

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