RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 CKS1BP61024 79 aa13.2□□□□□ -0.3
HMG20B-204ENST00000417382 C2orf82Q6UX34 121 aa13.2□□□□□ -0.3
HMG20B-204ENST00000417382 CHCHD1Q96BP2 118 aaKnown RBP13.2□□□□□ -0.3
HMG20B-204ENST00000417382 PKHD1L1Q86WI1 4243 aa13.2□□□□□ -0.3
HMG20B-204ENST00000417382 A0A1W2PNN7 141 aa13.19□□□□□ -0.3
HMG20B-204ENST00000417382 ATP5LO75964 103 aa13.19□□□□□ -0.3
HMG20B-204ENST00000417382 CXCL5P42830 114 aa13.19□□□□□ -0.3
HMG20B-204ENST00000417382 Q6ZRP5 223 aa13.19□□□□□ -0.3
HMG20B-204ENST00000417382 SMIM1B2RUZ4 78 aa13.18□□□□□ -0.3
HMG20B-204ENST00000417382 NDUFC2-KCTD14E9PQ53 114 aa13.18□□□□□ -0.3
HMG20B-204ENST00000417382 OXTP01178 125 aa13.18□□□□□ -0.3
HMG20B-204ENST00000417382 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
HMG20B-204ENST00000417382 C9orf116Q5BN46 136 aaPredicted RBP13.18□□□□□ -0.3
HMG20B-204ENST00000417382 TOMM7Q9P0U1 55 aa13.18□□□□□ -0.3
HMG20B-204ENST00000417382 IGLC3P0DOY3 106 aa13.17□□□□□ -0.3
HMG20B-204ENST00000417382 PRR3P79522 188 aaKnown RBP13.17□□□□□ -0.3
HMG20B-204ENST00000417382 F8VRH5 84 aa13.15□□□□□ -0.3
HMG20B-204ENST00000417382 H3BRM9 83 aa13.15□□□□□ -0.3
HMG20B-204ENST00000417382 PMCHL1Q16048 86 aa13.15□□□□□ -0.3
HMG20B-204ENST00000417382 J3QL48 77 aa13.14□□□□□ -0.31
HMG20B-204ENST00000417382 COX7B2Q8TF08 81 aa13.13□□□□□ -0.31
HMG20B-204ENST00000417382 LRP1Q07954 4544 aaKnown RBP13.12□□□□□ -0.31
HMG20B-204ENST00000417382 TRGC2P03986 189 aa13.12□□□□□ -0.31
HMG20B-204ENST00000417382 NDUFA6P56556 154 aa13.12□□□□□ -0.31
HMG20B-204ENST00000417382 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
HMG20B-204ENST00000417382 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
HMG20B-204ENST00000417382 HERC1Q15751 4861 aa13.12□□□□□ -0.31
HMG20B-204ENST00000417382 FAT3Q8TDW7 4589 aa13.11□□□□□ -0.31
HMG20B-204ENST00000417382 COLCA2A8K830 154 aa13.1□□□□□ -0.31
HMG20B-204ENST00000417382 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
HMG20B-204ENST00000417382 SPINK8P0C7L1 97 aa13.09□□□□□ -0.31
HMG20B-204ENST00000417382 ODF1Q14990 250 aa13.09□□□□□ -0.31
HMG20B-204ENST00000417382 BAGE3Q86Y29 109 aa13.09□□□□□ -0.31
HMG20B-204ENST00000417382 TRAV12-1A0A0B4J245 112 aa13.08□□□□□ -0.32
HMG20B-204ENST00000417382 ZNF22P17026 224 aaPredicted RBP13.08□□□□□ -0.32
HMG20B-204ENST00000417382 FAM168BA1KXE4 195 aa13.07□□□□□ -0.32
HMG20B-204ENST00000417382 C9orf129Q5T035 196 aaKnown RBP13.07□□□□□ -0.32
HMG20B-204ENST00000417382 PHF5AQ7RTV0 110 aaKnown RBP13.07□□□□□ -0.32
HMG20B-204ENST00000417382 IFI27L1Q96BM0 104 aa13.07□□□□□ -0.32
HMG20B-204ENST00000417382 HSBP1O75506 76 aa13.06□□□□□ -0.32
HMG20B-204ENST00000417382 SPINK6Q6UWN8 80 aa13.05□□□□□ -0.32
HMG20B-204ENST00000417382 C11orf86A6NJI1 115 aa13.04□□□□□ -0.32
HMG20B-204ENST00000417382 FAM19A5Q7Z5A7 132 aaPredicted RBP13.04□□□□□ -0.32
HMG20B-204ENST00000417382 KRTAP7-1Q8IUC3 87 aa13.04□□□□□ -0.32
HMG20B-204ENST00000417382 CHTOPQ9Y3Y2 248 aaKnown RBP13.04□□□□□ -0.32
HMG20B-204ENST00000417382 SRSF9Q13242 221 aaKnown RBP eCLIP13.03□□□□□ -0.32
HMG20B-204ENST00000417382 PSORS1C2Q9UIG4 136 aa13.03□□□□□ -0.32
HMG20B-204ENST00000417382 M0QXV9 152 aa13.01□□□□□ -0.33
HMG20B-204ENST00000417382 SFTA2Q6UW10 78 aa13.01□□□□□ -0.33
HMG20B-204ENST00000417382 FAM19A2Q8N3H0 131 aa13.01□□□□□ -0.33
HMG20B-204ENST00000417382 SERF1AO75920 110 aa13□□□□□ -0.33
HMG20B-204ENST00000417382 LINC00310P59036 64 aa13□□□□□ -0.33
HMG20B-204ENST00000417382 TMEM170BQ5T4T1 132 aa13□□□□□ -0.33
HMG20B-204ENST00000417382 XAGE1AQ9HD64 81 aa12.99□□□□□ -0.33
HMG20B-204ENST00000417382 TP73-AS1Q9UF72 201 aa12.98□□□□□ -0.33
HMG20B-204ENST00000417382 LEPROTL1O95214 131 aa12.97□□□□□ -0.33
HMG20B-204ENST00000417382 C1orf137Q5JT78 98 aa12.97□□□□□ -0.33
HMG20B-204ENST00000417382 PLA2G2DQ9UNK4 145 aa12.97□□□□□ -0.33
HMG20B-204ENST00000417382 COX17Q14061 63 aa12.96□□□□□ -0.33
HMG20B-204ENST00000417382 LBHQ53QV2 105 aaPredicted RBP12.96□□□□□ -0.33
HMG20B-204ENST00000417382 HSPB8Q9UJY1 196 aa12.96□□□□□ -0.33
HMG20B-204ENST00000417382 TMEM223A0PJW6 202 aa12.95□□□□□ -0.34
HMG20B-204ENST00000417382 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
HMG20B-204ENST00000417382 REG3GQ6UW15 175 aa12.95□□□□□ -0.34
HMG20B-204ENST00000417382 C22orf24Q9Y442 160 aa12.95□□□□□ -0.34
HMG20B-204ENST00000417382 MT1HL1P0DM35 61 aa12.94□□□□□ -0.34
HMG20B-204ENST00000417382 UBE2BP63146 152 aa12.94□□□□□ -0.34
HMG20B-204ENST00000417382 KRTAP11-1Q8IUC1 163 aa12.94□□□□□ -0.34
HMG20B-204ENST00000417382 LINC01600Q96MT4 127 aa12.94□□□□□ -0.34
HMG20B-204ENST00000417382 IGLV7-43P04211 117 aa12.93□□□□□ -0.34
HMG20B-204ENST00000417382 ZNF625Q96I27 306 aaPredicted RBP12.93□□□□□ -0.34
HMG20B-204ENST00000417382 NUPR1O60356 82 aa12.92□□□□□ -0.34
HMG20B-204ENST00000417382 SCO1O75880 301 aa12.92□□□□□ -0.34
HMG20B-204ENST00000417382 ERG28Q9UKR5 140 aa12.92□□□□□ -0.34
HMG20B-204ENST00000417382 IGLV5-37A0A075B6J1 123 aa12.91□□□□□ -0.34
HMG20B-204ENST00000417382 MRPL55Q7Z7F7 128 aaKnown RBP12.9□□□□□ -0.34
HMG20B-204ENST00000417382 PFN2P35080 140 aa12.89□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BKO60814 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BJP06899 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BOP23527 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 PLNP26678 52 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BBP33778 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BDP58876 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BCP62807 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST2H2BEQ16778 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BHQ93079 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BNQ99877 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 HIST1H2BMQ99879 126 aa12.88□□□□□ -0.35
HMG20B-204ENST00000417382 DIRC1Q969H9 104 aa12.87□□□□□ -0.35
HMG20B-204ENST00000417382 TNXBP22105 4242 aa12.86□□□□□ -0.35
HMG20B-204ENST00000417382 H0Y8G0 127 aa12.85□□□□□ -0.35
HMG20B-204ENST00000417382 FABP4P15090 132 aa12.85□□□□□ -0.35
HMG20B-204ENST00000417382 SND1-IT1Q9HBX3 110 aa12.85□□□□□ -0.35
HMG20B-204ENST00000417382 DPM2O94777 84 aa12.83□□□□□ -0.36
HMG20B-204ENST00000417382 HERV-K104P63124 156 aa12.83□□□□□ -0.36
HMG20B-204ENST00000417382 NKAPP1Q8N9T2 125 aa12.83□□□□□ -0.36
HMG20B-204ENST00000417382 LINC00167Q96N53 147 aa12.83□□□□□ -0.36
HMG20B-204ENST00000417382 MAP1LC3CQ9BXW4 147 aa12.83□□□□□ -0.36
HMG20B-204ENST00000417382 H0Y9J4 135 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms