RNA–Protein interactions for RNA: ENST00000417295.6

SH3GL1-202, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

TSL 2 BASIC

Gene SH3GL1, Length 1,404 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-202ENST00000417295 ATP5LO75964 103 aa17.98■□□□□ 0.47
SH3GL1-202ENST00000417295 C6orf226Q5I0X4 101 aa17.98■□□□□ 0.47
SH3GL1-202ENST00000417295 BAGE3Q86Y29 109 aa17.98■□□□□ 0.47
SH3GL1-202ENST00000417295 Q6ZRP5 223 aa17.96■□□□□ 0.47
SH3GL1-202ENST00000417295 TRBV30A0A0K0K1B3 111 aa17.95■□□□□ 0.46
SH3GL1-202ENST00000417295 A0A1W2PNN7 141 aa17.95■□□□□ 0.46
SH3GL1-202ENST00000417295 TLX1NBP0CAT3 122 aa17.95■□□□□ 0.46
SH3GL1-202ENST00000417295 IGLC3P0DOY3 106 aa17.95■□□□□ 0.46
SH3GL1-202ENST00000417295 CKS1BP61024 79 aa17.95■□□□□ 0.46
SH3GL1-202ENST00000417295 C9orf116Q5BN46 136 aaPredicted RBP17.94■□□□□ 0.46
SH3GL1-202ENST00000417295 SPINK8P0C7L1 97 aa17.93■□□□□ 0.46
SH3GL1-202ENST00000417295 FAM19A2Q8N3H0 131 aa17.93■□□□□ 0.46
SH3GL1-202ENST00000417295 HSBP1O75506 76 aa17.92■□□□□ 0.46
SH3GL1-202ENST00000417295 LINC00310P59036 64 aa17.92■□□□□ 0.46
SH3GL1-202ENST00000417295 C7orf33Q8WU49 177 aa17.92■□□□□ 0.46
SH3GL1-202ENST00000417295 FLG2Q5D862 2391 aaPredicted RBP17.92■□□□□ 0.46
SH3GL1-202ENST00000417295 MYCBP2O75592 4640 aa17.9■□□□□ 0.46
SH3GL1-202ENST00000417295 HNRNPA3P51991 378 aaKnown RBP17.89■□□□□ 0.46
SH3GL1-202ENST00000417295 GAGE2EQ4V326 116 aa17.89■□□□□ 0.46
SH3GL1-202ENST00000417295 IFI27L1Q96BM0 104 aa17.89■□□□□ 0.46
SH3GL1-202ENST00000417295 GAGE2DQ9UEU5 116 aa17.89■□□□□ 0.46
SH3GL1-202ENST00000417295 SERF1AO75920 110 aa17.89■□□□□ 0.45
SH3GL1-202ENST00000417295 ZNF22P17026 224 aaPredicted RBP17.89■□□□□ 0.45
SH3GL1-202ENST00000417295 COX7B2Q8TF08 81 aa17.89■□□□□ 0.45
SH3GL1-202ENST00000417295 NDUFC2-KCTD14E9PQ53 114 aa17.88■□□□□ 0.45
SH3GL1-202ENST00000417295 H3BRM9 83 aa17.88■□□□□ 0.45
SH3GL1-202ENST00000417295 F8VRH5 84 aa17.87■□□□□ 0.45
SH3GL1-202ENST00000417295 C11orf86A6NJI1 115 aa17.86■□□□□ 0.45
SH3GL1-202ENST00000417295 FAM168BA1KXE4 195 aa17.85■□□□□ 0.45
SH3GL1-202ENST00000417295 NUPR1O60356 82 aa17.85■□□□□ 0.45
SH3GL1-202ENST00000417295 CXCL5P42830 114 aa17.85■□□□□ 0.45
SH3GL1-202ENST00000417295 CHTOPQ9Y3Y2 248 aaKnown RBP17.84■□□□□ 0.45
SH3GL1-202ENST00000417295 TRAV12-1A0A0B4J245 112 aa17.81■□□□□ 0.44
SH3GL1-202ENST00000417295 IGLV5-39A0A0G2JS06 123 aa17.81■□□□□ 0.44
SH3GL1-202ENST00000417295 C9orf129Q5T035 196 aaKnown RBP17.81■□□□□ 0.44
SH3GL1-202ENST00000417295 TMEM170BQ5T4T1 132 aa17.81■□□□□ 0.44
SH3GL1-202ENST00000417295 PRR3P79522 188 aaKnown RBP17.8■□□□□ 0.44
SH3GL1-202ENST00000417295 PHF5AQ7RTV0 110 aaKnown RBP17.8■□□□□ 0.44
SH3GL1-202ENST00000417295 KRTAP7-1Q8IUC3 87 aa17.8■□□□□ 0.44
SH3GL1-202ENST00000417295 FAM19A5Q7Z5A7 132 aaPredicted RBP17.78■□□□□ 0.44
SH3GL1-202ENST00000417295 LEPROTL1O95214 131 aa17.77■□□□□ 0.44
SH3GL1-202ENST00000417295 HIST1H2BKO60814 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BJP06899 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BOP23527 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BBP33778 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BDP58876 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BCP62807 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST2H2BEQ16778 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BHQ93079 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BNQ99877 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 HIST1H2BMQ99879 126 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 XAGE1AQ9HD64 81 aa17.74■□□□□ 0.43
SH3GL1-202ENST00000417295 H0Y8G0 127 aa17.73■□□□□ 0.43
SH3GL1-202ENST00000417295 FABP4P15090 132 aa17.72■□□□□ 0.43
SH3GL1-202ENST00000417295 PKHD1L1Q86WI1 4243 aa17.72■□□□□ 0.43
SH3GL1-202ENST00000417295 KRTAP29-1A8MX34 341 aaPredicted RBP17.72■□□□□ 0.43
SH3GL1-202ENST00000417295 ODF1Q14990 250 aa17.72■□□□□ 0.43
SH3GL1-202ENST00000417295 TMEM223A0PJW6 202 aa17.7■□□□□ 0.42
SH3GL1-202ENST00000417295 HSPB8Q9UJY1 196 aa17.7■□□□□ 0.42
SH3GL1-202ENST00000417295 M0QXV9 152 aa17.69■□□□□ 0.42
SH3GL1-202ENST00000417295 KRTAP11-1Q8IUC1 163 aa17.69■□□□□ 0.42
SH3GL1-202ENST00000417295 SERTAD4-AS1Q5TG53 156 aa17.68■□□□□ 0.42
SH3GL1-202ENST00000417295 PSORS1C2Q9UIG4 136 aa17.68■□□□□ 0.42
SH3GL1-202ENST00000417295 LRP1Q07954 4544 aaKnown RBP17.68■□□□□ 0.42
SH3GL1-202ENST00000417295 J3QL48 77 aa17.65■□□□□ 0.42
SH3GL1-202ENST00000417295 ZNF625Q96I27 306 aaPredicted RBP17.64■□□□□ 0.41
SH3GL1-202ENST00000417295 OXTP01178 125 aa17.63■□□□□ 0.41
SH3GL1-202ENST00000417295 PFN2P35080 140 aa17.63■□□□□ 0.41
SH3GL1-202ENST00000417295 PMCHL2Q9BQD1 86 aa17.61■□□□□ 0.41
SH3GL1-202ENST00000417295 ERG28Q9UKR5 140 aa17.61■□□□□ 0.41
SH3GL1-202ENST00000417295 C22orf24Q9Y442 160 aa17.61■□□□□ 0.41
SH3GL1-202ENST00000417295 DMBT1Q9UGM3 2413 aaPredicted RBP17.6■□□□□ 0.41
SH3GL1-202ENST00000417295 FAT3Q8TDW7 4589 aa17.59■□□□□ 0.41
SH3GL1-202ENST00000417295 SRSF9Q13242 221 aaKnown RBP eCLIP17.59■□□□□ 0.41
SH3GL1-202ENST00000417295 C1orf137Q5JT78 98 aa17.59■□□□□ 0.41
SH3GL1-202ENST00000417295 UBE2BP63146 152 aa17.58■□□□□ 0.41
SH3GL1-202ENST00000417295 HERC1Q15751 4861 aa17.58■□□□□ 0.4
SH3GL1-202ENST00000417295 S100A1P23297 94 aa17.57■□□□□ 0.4
SH3GL1-202ENST00000417295 PLNP26678 52 aa17.57■□□□□ 0.4
SH3GL1-202ENST00000417295 SFTA2Q6UW10 78 aa17.57■□□□□ 0.4
SH3GL1-202ENST00000417295 MAP1LC3CQ9BXW4 147 aa17.57■□□□□ 0.4
SH3GL1-202ENST00000417295 ATP6V1G1O75348 118 aa17.56■□□□□ 0.4
SH3GL1-202ENST00000417295 SPINK6Q6UWN8 80 aa17.56■□□□□ 0.4
SH3GL1-202ENST00000417295 DPM2O94777 84 aa17.55■□□□□ 0.4
SH3GL1-202ENST00000417295 COX17Q14061 63 aa17.55■□□□□ 0.4
SH3GL1-202ENST00000417295 PLA2G2DQ9UNK4 145 aa17.54■□□□□ 0.4
SH3GL1-202ENST00000417295 COA6Q5JTJ3 125 aaKnown RBP17.53■□□□□ 0.4
SH3GL1-202ENST00000417295 SND1-IT1Q9HBX3 110 aa17.53■□□□□ 0.4
SH3GL1-202ENST00000417295 IGKCP01834 107 aa17.52■□□□□ 0.4
SH3GL1-202ENST00000417295 TP73-AS1Q9UF72 201 aa17.52■□□□□ 0.4
SH3GL1-202ENST00000417295 LBHQ53QV2 105 aaPredicted RBP17.51■□□□□ 0.39
SH3GL1-202ENST00000417295 MRPL55Q7Z7F7 128 aaKnown RBP17.51■□□□□ 0.39
SH3GL1-202ENST00000417295 IGLV7-43P04211 117 aa17.5■□□□□ 0.39
SH3GL1-202ENST00000417295 SYS1-DBNDD2H3BUS1 97 aa17.49■□□□□ 0.39
SH3GL1-202ENST00000417295 TSPEAR-AS2P59090 65 aa17.49■□□□□ 0.39
SH3GL1-202ENST00000417295 IGLV5-37A0A075B6J1 123 aa17.47■□□□□ 0.39
SH3GL1-202ENST00000417295 A0A0U1RRA0 63 aa17.47■□□□□ 0.39
SH3GL1-202ENST00000417295 LINC00158P58513 81 aa17.47■□□□□ 0.39
SH3GL1-202ENST00000417295 NDUFA12Q9UI09 145 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms