RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 C1orf43Q9BWL3 253 aa10.46□□□□□ -0.73
NCKIPSD-204ENST00000416649 C11orf68Q9H3H3 251 aaKnown RBP10.46□□□□□ -0.74
NCKIPSD-204ENST00000416649 IGLV1-40P01703 118 aa10.45□□□□□ -0.74
NCKIPSD-204ENST00000416649 C18orf65Q6ZTR6 163 aa10.45□□□□□ -0.74
NCKIPSD-204ENST00000416649 FAM236DA0A1B0GTK5 79 aa10.45□□□□□ -0.74
NCKIPSD-204ENST00000416649 H0YGX0 51 aa10.45□□□□□ -0.74
NCKIPSD-204ENST00000416649 FAM236CP0DP71 79 aa10.45□□□□□ -0.74
NCKIPSD-204ENST00000416649 CCL18P55774 89 aa10.44□□□□□ -0.74
NCKIPSD-204ENST00000416649 LINC00336Q6ZUF6 198 aa10.44□□□□□ -0.74
NCKIPSD-204ENST00000416649 ORMDL1Q9P0S3 153 aa10.44□□□□□ -0.74
NCKIPSD-204ENST00000416649 NDUFC2O95298 119 aa10.43□□□□□ -0.74
NCKIPSD-204ENST00000416649 PKIGQ9Y2B9 76 aa10.43□□□□□ -0.74
NCKIPSD-204ENST00000416649 MRAPQ8TCY5 172 aa10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 COX7B2Q8TF08 81 aa10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 SETXQ7Z333 2677 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 CCKP06307 115 aa10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 XCL1P47992 114 aa10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 XCL2Q9UBD3 114 aa10.42□□□□□ -0.74
NCKIPSD-204ENST00000416649 TRGV1A0A0A0MS02 117 aa10.41□□□□□ -0.74
NCKIPSD-204ENST00000416649 J3QKU1 62 aa10.41□□□□□ -0.74
NCKIPSD-204ENST00000416649 UBE2L6O14933 153 aa10.41□□□□□ -0.74
NCKIPSD-204ENST00000416649 PLA2G2AP14555 144 aa10.41□□□□□ -0.74
NCKIPSD-204ENST00000416649 OBSCN-AS1Q96MR7 158 aa10.41□□□□□ -0.74
NCKIPSD-204ENST00000416649 NTM-AS1Q6ZSK4 140 aa10.4□□□□□ -0.74
NCKIPSD-204ENST00000416649 CDC42SE2Q9NRR3 84 aa10.4□□□□□ -0.74
NCKIPSD-204ENST00000416649 SNURFQ9Y675 71 aa10.4□□□□□ -0.74
NCKIPSD-204ENST00000416649 OTOGQ6ZRI0 2925 aa10.4□□□□□ -0.75
NCKIPSD-204ENST00000416649 KRTAP1-3Q8IUG1 177 aa10.39□□□□□ -0.75
NCKIPSD-204ENST00000416649 S100A7L2Q5SY68 101 aa10.39□□□□□ -0.75
NCKIPSD-204ENST00000416649 SS18Q15532 418 aa10.38□□□□□ -0.75
NCKIPSD-204ENST00000416649 PSMB8P28062 276 aa10.38□□□□□ -0.75
NCKIPSD-204ENST00000416649 UBE2E2Q96LR5 201 aa10.38□□□□□ -0.75
NCKIPSD-204ENST00000416649 UBL5Q9BZL1 73 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 J3QLI3 93 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 RPL35AP18077 110 aaKnown RBP10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 SLURP1P55000 103 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 Q6ZTI0 123 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 C11orf72Q8NBR9 251 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 SMR3AQ99954 134 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 PRO0628Q9UI54 55 aa10.37□□□□□ -0.75
NCKIPSD-204ENST00000416649 NDUFC2-KCTD14E9PQ53 114 aa10.36□□□□□ -0.75
NCKIPSD-204ENST00000416649 PRR3P79522 188 aaKnown RBP10.35□□□□□ -0.75
NCKIPSD-204ENST00000416649 Q6YL49 198 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 SERP1Q9Y6X1 66 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 A0A1W2PRX2 142 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 H7BZZ5 65 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 HAMPP81172 84 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 RMI2Q96E14 147 aa10.34□□□□□ -0.75
NCKIPSD-204ENST00000416649 TEP1Q99973 2627 aaKnown RBP10.33□□□□□ -0.76
NCKIPSD-204ENST00000416649 JMJD7-PLA2G4BH0Y9G9 81 aa10.33□□□□□ -0.76
NCKIPSD-204ENST00000416649 K7EQD1 137 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 ATP5EP2Q5VTU8 51 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 ZNF702PQ9H963 129 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 TMEM89A2RUT3 159 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 INSP01308 110 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 FAM19A3Q7Z5A8 133 aa10.32□□□□□ -0.76
NCKIPSD-204ENST00000416649 A0A0U1RQV1 116 aa10.31□□□□□ -0.76
NCKIPSD-204ENST00000416649 F8WEM9 126 aa10.31□□□□□ -0.76
NCKIPSD-204ENST00000416649 RBM3P98179 157 aaKnown RBP10.31□□□□□ -0.76
NCKIPSD-204ENST00000416649 C6orf226Q5I0X4 101 aa10.31□□□□□ -0.76
NCKIPSD-204ENST00000416649 LOC100131303A0A0U1RQF7 123 aa10.3□□□□□ -0.76
NCKIPSD-204ENST00000416649 TRBV6-4A0A1B0GX49 114 aa10.3□□□□□ -0.76
NCKIPSD-204ENST00000416649 LINC00474Q9P2X8 69 aa10.3□□□□□ -0.76
NCKIPSD-204ENST00000416649 TRAV10A0A0B4J240 114 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 IBA57-AS1B1ANH7 110 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 BRK1Q8WUW1 75 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 HIVEP1P15822 2718 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 TMEM256-PLSCR3K7ERE1 68 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 Q8N814 137 aa10.29□□□□□ -0.76
NCKIPSD-204ENST00000416649 IGLV4-60A0A075B6I1 120 aa10.28□□□□□ -0.76
NCKIPSD-204ENST00000416649 FSHBP01225 129 aa10.28□□□□□ -0.76
NCKIPSD-204ENST00000416649 LYPD5Q6UWN5 251 aa10.28□□□□□ -0.76
NCKIPSD-204ENST00000416649 ATRQ13535 2644 aa10.28□□□□□ -0.76
NCKIPSD-204ENST00000416649 TRAV7A0A075B6U4 112 aa10.28□□□□□ -0.76
NCKIPSD-204ENST00000416649 TMEM86BQ8N661 226 aa10.27□□□□□ -0.76
NCKIPSD-204ENST00000416649 MAP6D1Q9H9H5 199 aa10.27□□□□□ -0.76
NCKIPSD-204ENST00000416649 ESM1Q9NQ30 184 aa10.27□□□□□ -0.76
NCKIPSD-204ENST00000416649 FP248Q71RG6 208 aaPredicted RBP10.27□□□□□ -0.77
NCKIPSD-204ENST00000416649 LAMTOR3Q9UHA4 124 aa10.27□□□□□ -0.77
NCKIPSD-204ENST00000416649 DYNLRB2Q8TF09 96 aa10.27□□□□□ -0.77
NCKIPSD-204ENST00000416649 SMIM26A0A096LP01 95 aa10.26□□□□□ -0.77
NCKIPSD-204ENST00000416649 DNAJC9-AS1A6NH13 148 aa10.26□□□□□ -0.77
NCKIPSD-204ENST00000416649 M0R2N4 97 aa10.26□□□□□ -0.77
NCKIPSD-204ENST00000416649 NOP10Q9NPE3 64 aaKnown RBP10.26□□□□□ -0.77
NCKIPSD-204ENST00000416649 SCXQ7RTU7 201 aa10.25□□□□□ -0.77
NCKIPSD-204ENST00000416649 TRGV2A0A075B6R0 118 aa10.24□□□□□ -0.77
NCKIPSD-204ENST00000416649 IGHV3OR16-9A0A0B4J2B5 98 aa10.24□□□□□ -0.77
NCKIPSD-204ENST00000416649 TRBV10-1A0A0K0K1A3 114 aa10.24□□□□□ -0.77
NCKIPSD-204ENST00000416649 CLPSL2Q6UWE3 100 aa10.24□□□□□ -0.77
NCKIPSD-204ENST00000416649 VWFP04275 2813 aa10.24□□□□□ -0.77
NCKIPSD-204ENST00000416649 A8MTW9 85 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 LINC01547P58512 204 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 NSD1Q96L73 2696 aaPredicted RBP10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 F8P00451 2351 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 C6orf99Q4VX62 202 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 MPLKIPQ8TAP9 179 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 WFDC10AQ9H1F0 79 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 TENM1Q9UKZ4 2725 aa10.23□□□□□ -0.77
NCKIPSD-204ENST00000416649 ANK3Q12955 4377 aaKnown RBP10.22□□□□□ -0.77
NCKIPSD-204ENST00000416649 TRBV10-3A0A0K0K1G6 114 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms