RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 C1orf137Q5JT78 98 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 LCE2AQ5TA79 106 aaPredicted RBP5.7□□□□□ -1.5
LINC01238-201ENST00000416204 LINC00173Q6ZV60 143 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 IFI27L1Q96BM0 104 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 PSORS1C2Q9UIG4 136 aa5.7□□□□□ -1.5
LINC01238-201ENST00000416204 A0A1W2PNN7 141 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 XCL1P47992 114 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 ORMDL2Q53FV1 153 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 CARD19Q96LW7 228 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 PMCHL2Q9BQD1 86 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 LINC00474Q9P2X8 69 aa5.69□□□□□ -1.5
LINC01238-201ENST00000416204 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.68□□□□□ -1.5
LINC01238-201ENST00000416204 IGKV2-29A2NJV5 120 aaPredicted RBP5.68□□□□□ -1.5
LINC01238-201ENST00000416204 SUMO2P61956 95 aaKnown RBP5.68□□□□□ -1.5
LINC01238-201ENST00000416204 FOXI1Q12951 378 aa5.68□□□□□ -1.5
LINC01238-201ENST00000416204 PHF5AQ7RTV0 110 aaKnown RBP5.68□□□□□ -1.5
LINC01238-201ENST00000416204 SMIM2Q9BVW6 85 aa5.68□□□□□ -1.5
LINC01238-201ENST00000416204 TCAPO15273 167 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 PTTG1IPP53801 180 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 COTL1Q14019 142 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 AMMECR1LQ6DCA0 310 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 Q6ZN92 141 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 ATOH7Q8N100 152 aa5.67□□□□□ -1.5
LINC01238-201ENST00000416204 TRBV6-5A0A0K0K1A5 114 aa5.66□□□□□ -1.5
LINC01238-201ENST00000416204 SNHG12Q9BXW3 62 aa5.66□□□□□ -1.5
LINC01238-201ENST00000416204 VCYO14598 125 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 CCL25O15444 150 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 SYCNQ0VAF6 134 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 C9orf116Q5BN46 136 aaPredicted RBP5.65□□□□□ -1.5
LINC01238-201ENST00000416204 SLC25A34Q6PIV7 304 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 KRTAP11-1Q8IUC1 163 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 TOMM6Q96B49 74 aa5.65□□□□□ -1.5
LINC01238-201ENST00000416204 MUC17Q685J3 4493 aa5.65□□□□□ -1.51
LINC01238-201ENST00000416204 TRAV12-1A0A0B4J245 112 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 IGHV1-58A0A0C4DH39 117 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 H0Y8G0 127 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 DLEU1O43261 78 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 TSPAN13O95857 204 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 COX8AP10176 69 aa5.64□□□□□ -1.51
LINC01238-201ENST00000416204 POLR2KP53803 58 aaKnown RBP5.64□□□□□ -1.51
LINC01238-201ENST00000416204 RPL18AQ02543 176 aaKnown RBP5.64□□□□□ -1.51
LINC01238-201ENST00000416204 IGLV4-69A0A075B6H9 119 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 LOC107984640A0A0U1RRK4 108 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.63□□□□□ -1.51
LINC01238-201ENST00000416204 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 DPM2O94777 84 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 IGKCP01834 107 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 IGLV7-43P04211 117 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 FGF6P10767 208 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 COL5A1-AS1Q5SY13 56 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 DIRC1Q969H9 104 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 RPL39LQ96EH5 51 aaKnown RBP5.63□□□□□ -1.51
LINC01238-201ENST00000416204 KIR2DL4Q99706 377 aa5.63□□□□□ -1.51
LINC01238-201ENST00000416204 OPRPNQ99935 248 aaPredicted RBP5.63□□□□□ -1.51
LINC01238-201ENST00000416204 A0A087WZ39 114 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 TRBV27A0A0K0K1C4 114 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 LINC00959A0A1B0GUT2 108 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 FAM168BA1KXE4 195 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 H0Y9J4 135 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 PLNP26678 52 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 ERASQ7Z444 233 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 OR5A1Q8NGJ0 315 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 TMEM141Q96I45 108 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 SCGB3A1Q96QR1 104 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 PKIGQ9Y2B9 76 aa5.62□□□□□ -1.51
LINC01238-201ENST00000416204 KRTAP1-4P0C5Y4 121 aa5.61□□□□□ -1.51
LINC01238-201ENST00000416204 UBE2D1P51668 147 aa5.61□□□□□ -1.51
LINC01238-201ENST00000416204 PAPPA-AS1Q5QFB9 102 aa5.61□□□□□ -1.51
LINC01238-201ENST00000416204 C2orf66Q6UXQ4 117 aa5.61□□□□□ -1.51
LINC01238-201ENST00000416204 CYSLTR1Q9Y271 337 aa5.61□□□□□ -1.51
LINC01238-201ENST00000416204 A0A1B0GV90 55 aa5.6□□□□□ -1.51
LINC01238-201ENST00000416204 SDHAF1A6NFY7 115 aa5.6□□□□□ -1.51
LINC01238-201ENST00000416204 F8VRH5 84 aa5.6□□□□□ -1.51
LINC01238-201ENST00000416204 BOD1L2Q8IYS8 172 aa5.6□□□□□ -1.51
LINC01238-201ENST00000416204 TIMM17AQ99595 171 aa5.6□□□□□ -1.51
LINC01238-201ENST00000416204 IGLV1-50A0A075B6I6 118 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 I3L3M4 83 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 APOMO95445 188 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 NPSP0C0P6 89 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 ANKRD39Q53RE8 183 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 FAM19A5Q7Z5A7 132 aaPredicted RBP5.59□□□□□ -1.51
LINC01238-201ENST00000416204 TMEM101Q96IK0 257 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 CAMK2N2Q96S95 79 aa5.59□□□□□ -1.51
LINC01238-201ENST00000416204 IGIPA6NJ69 53 aa5.58□□□□□ -1.52
LINC01238-201ENST00000416204 MALP21145 153 aa5.58□□□□□ -1.52
LINC01238-201ENST00000416204 SS18Q15532 418 aa5.58□□□□□ -1.52
LINC01238-201ENST00000416204 BATFQ16520 125 aa5.58□□□□□ -1.52
LINC01238-201ENST00000416204 RNASE13Q5GAN3 156 aaKnown RBP5.58□□□□□ -1.52
LINC01238-201ENST00000416204 MRPL35Q9NZE8 188 aaKnown RBP5.58□□□□□ -1.52
LINC01238-201ENST00000416204 HIGD1BQ9P298 99 aa5.58□□□□□ -1.52
LINC01238-201ENST00000416204 CHTOPQ9Y3Y2 248 aaKnown RBP5.58□□□□□ -1.52
LINC01238-201ENST00000416204 HINT1P49773 126 aaPredicted RBP5.57□□□□□ -1.52
LINC01238-201ENST00000416204 SEC11AP67812 179 aa5.57□□□□□ -1.52
LINC01238-201ENST00000416204 PMVKQ15126 192 aa5.57□□□□□ -1.52
LINC01238-201ENST00000416204 ZC2HC1BQ5TFG8 222 aa5.57□□□□□ -1.52
LINC01238-201ENST00000416204 CD164L2Q6UWJ8 174 aa5.57□□□□□ -1.52
LINC01238-201ENST00000416204 C2orf91Q6ZV80 131 aa5.57□□□□□ -1.52
LINC01238-201ENST00000416204 COX7A2LO14548 114 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 TSHBP01222 138 aa5.56□□□□□ -1.52
LINC01238-201ENST00000416204 NMUP48645 174 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms