RNA–Protein interactions for RNA: ENST00000413951.5

SF1-207, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 623 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-207ENST00000413951 HSPB8Q9UJY1 196 aa10.63□□□□□ -0.71
SF1-207ENST00000413951 NDUFA6P56556 154 aa10.62□□□□□ -0.71
SF1-207ENST00000413951 FAT3Q8TDW7 4589 aa10.62□□□□□ -0.71
SF1-207ENST00000413951 A0A087WYN8 130 aa10.61□□□□□ -0.71
SF1-207ENST00000413951 PANO1I0J062 215 aa10.61□□□□□ -0.71
SF1-207ENST00000413951 SPACA4Q8TDM5 124 aa10.61□□□□□ -0.71
SF1-207ENST00000413951 HNRNPA3P51991 378 aaKnown RBP10.6□□□□□ -0.71
SF1-207ENST00000413951 LINC00469Q8N7U9 141 aa10.6□□□□□ -0.71
SF1-207ENST00000413951 ORAOV1Q8WV07 137 aa10.6□□□□□ -0.71
SF1-207ENST00000413951 C2orf48Q96LS8 159 aa10.6□□□□□ -0.71
SF1-207ENST00000413951 HMCN2Q8NDA2 5059 aa10.6□□□□□ -0.71
SF1-207ENST00000413951 F8VRH5 84 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 FABP4P15090 132 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 SPAG11BQ08648 103 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 KIAA0087Q14695 138 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 ODF1Q14990 250 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 PLAC8Q9NZF1 115 aa10.59□□□□□ -0.71
SF1-207ENST00000413951 CHTOPQ9Y3Y2 248 aaKnown RBP10.59□□□□□ -0.71
SF1-207ENST00000413951 C11orf86A6NJI1 115 aa10.58□□□□□ -0.72
SF1-207ENST00000413951 SMIM1B2RUZ4 78 aa10.58□□□□□ -0.72
SF1-207ENST00000413951 ZNF22P17026 224 aaPredicted RBP10.58□□□□□ -0.72
SF1-207ENST00000413951 LINC00526Q96FQ7 95 aa10.58□□□□□ -0.72
SF1-207ENST00000413951 LINC00474Q9P2X8 69 aa10.58□□□□□ -0.72
SF1-207ENST00000413951 F8WDY8 70 aa10.57□□□□□ -0.72
SF1-207ENST00000413951 MRPL35Q9NZE8 188 aaKnown RBP10.57□□□□□ -0.72
SF1-207ENST00000413951 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 H3BRM9 83 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 CHTF8P0CG12 524 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 SYCNQ0VAF6 134 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 Q8IZM0 81 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 CARD19Q96LW7 228 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 MAP1LC3CQ9BXW4 147 aa10.55□□□□□ -0.72
SF1-207ENST00000413951 MAJINQ3KP22 176 aa10.54□□□□□ -0.72
SF1-207ENST00000413951 SYS1-DBNDD2H3BUS1 97 aa10.53□□□□□ -0.72
SF1-207ENST00000413951 HIST3H2BBQ8N257 126 aa10.53□□□□□ -0.72
SF1-207ENST00000413951 CAMK2N2Q96S95 79 aa10.53□□□□□ -0.72
SF1-207ENST00000413951 PKHD1L1Q86WI1 4243 aa10.52□□□□□ -0.72
SF1-207ENST00000413951 H0Y8G0 127 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 SPINK8P0C7L1 97 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 MT1HL1P0DM35 61 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 PLNP26678 52 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 RNF151Q2KHN1 245 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 STPG4Q8N801 248 aa10.52□□□□□ -0.73
SF1-207ENST00000413951 IGKV2-24A0A0C4DH68 120 aa10.51□□□□□ -0.73
SF1-207ENST00000413951 NDUFA1O15239 70 aa10.51□□□□□ -0.73
SF1-207ENST00000413951 TMEM223A0PJW6 202 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 S100A6P06703 90 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 TMEM170BQ5T4T1 132 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 C10orf25Q5T742 122 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 LINC01545Q5VT33 79 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 PET117Q6UWS5 81 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 COX7B2Q8TF08 81 aa10.5□□□□□ -0.73
SF1-207ENST00000413951 DPM2O94777 84 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 PRSS2P07478 247 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 C3orf79P0CE67 100 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 CXCL5P42830 114 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 C2orf82Q6UX34 121 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 UNQ6190/PRO20217Q6UXQ8 127 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 HIST1H2BLQ99880 126 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 TOMM7Q9P0U1 55 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 C6orf48Q9UBA6 75 aa10.49□□□□□ -0.73
SF1-207ENST00000413951 TRBV30A0A0K0K1B3 111 aa10.48□□□□□ -0.73
SF1-207ENST00000413951 C5orf52A6NGY3 159 aa10.48□□□□□ -0.73
SF1-207ENST00000413951 C6orf226Q5I0X4 101 aa10.48□□□□□ -0.73
SF1-207ENST00000413951 IGKCP01834 107 aa10.47□□□□□ -0.73
SF1-207ENST00000413951 SNRPEP62304 92 aaKnown RBP10.47□□□□□ -0.73
SF1-207ENST00000413951 PRR3P79522 188 aaKnown RBP10.47□□□□□ -0.73
SF1-207ENST00000413951 LINC01600Q96MT4 127 aa10.47□□□□□ -0.73
SF1-207ENST00000413951 PMCHL2Q9BQD1 86 aa10.47□□□□□ -0.73
SF1-207ENST00000413951 UBR4Q5T4S7 5183 aa10.47□□□□□ -0.73
SF1-207ENST00000413951 TLX1NBP0CAT3 122 aa10.46□□□□□ -0.73
SF1-207ENST00000413951 CKS1BP61024 79 aa10.46□□□□□ -0.73
SF1-207ENST00000413951 REG3GQ6UW15 175 aa10.46□□□□□ -0.73
SF1-207ENST00000413951 SPINK6Q6UWN8 80 aa10.46□□□□□ -0.73
SF1-207ENST00000413951 A0A096LNI7 61 aa10.45□□□□□ -0.74
SF1-207ENST00000413951 S100A2P29034 98 aa10.45□□□□□ -0.74
SF1-207ENST00000413951 KRTDAPP60985 99 aa10.45□□□□□ -0.74
SF1-207ENST00000413951 LOC107984640A0A0U1RRK4 108 aa10.44□□□□□ -0.74
SF1-207ENST00000413951 Q6ZRP5 223 aa10.44□□□□□ -0.74
SF1-207ENST00000413951 PTTG1IPP53801 180 aa10.42□□□□□ -0.74
SF1-207ENST00000413951 SFTA2Q6UW10 78 aa10.42□□□□□ -0.74
SF1-207ENST00000413951 ZNF625Q96I27 306 aaPredicted RBP10.42□□□□□ -0.74
SF1-207ENST00000413951 NDUFC2-KCTD14E9PQ53 114 aa10.41□□□□□ -0.74
SF1-207ENST00000413951 C9orf116Q5BN46 136 aaPredicted RBP10.41□□□□□ -0.74
SF1-207ENST00000413951 C20orf202A1L168 122 aa10.4□□□□□ -0.74
SF1-207ENST00000413951 HERVK_113P61574 105 aa10.39□□□□□ -0.75
SF1-207ENST00000413951 LEPROTO15243 131 aa10.38□□□□□ -0.75
SF1-207ENST00000413951 AKR1D1P51857 326 aa10.38□□□□□ -0.75
SF1-207ENST00000413951 TSPEAR-AS2P59090 65 aa10.38□□□□□ -0.75
SF1-207ENST00000413951 RPL18AQ02543 176 aaKnown RBP10.38□□□□□ -0.75
SF1-207ENST00000413951 PLEKHB2Q96CS7 222 aa10.38□□□□□ -0.75
SF1-207ENST00000413951 E9PLD3 99 aa10.37□□□□□ -0.75
SF1-207ENST00000413951 GAGE2BQ13066 116 aa10.37□□□□□ -0.75
SF1-207ENST00000413951 J3QQQ9 107 aa10.35□□□□□ -0.75
SF1-207ENST00000413951 SRSF9Q13242 221 aaKnown RBP eCLIP10.35□□□□□ -0.75
SF1-207ENST00000413951 NDUFA12Q9UI09 145 aa10.35□□□□□ -0.75
SF1-207ENST00000413951 NMUP48645 174 aa10.34□□□□□ -0.75
SF1-207ENST00000413951 COX17Q14061 63 aa10.34□□□□□ -0.75
SF1-207ENST00000413951 KRTAP10-8P60410 259 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms