RNA–Protein interactions for RNA: ENST00000413872.6

PHRF1-202, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-202ENST00000413872 Q6ZSN1 163 aa12.24□□□□□ -0.45
PHRF1-202ENST00000413872 WFDC10BQ8IUB3 73 aa12.24□□□□□ -0.45
PHRF1-202ENST00000413872 IGLV9-49A0A0B4J1Y8 123 aa12.23□□□□□ -0.45
PHRF1-202ENST00000413872 TRBV10-3A0A0K0K1G6 114 aa12.23□□□□□ -0.45
PHRF1-202ENST00000413872 J3KT08 172 aa12.23□□□□□ -0.45
PHRF1-202ENST00000413872 NDUFC2O95298 119 aa12.23□□□□□ -0.45
PHRF1-202ENST00000413872 C11orf72Q8NBR9 251 aa12.22□□□□□ -0.45
PHRF1-202ENST00000413872 GOLGB1Q14789 3259 aaKnown RBP12.22□□□□□ -0.45
PHRF1-202ENST00000413872 C9orf116Q5BN46 136 aaPredicted RBP12.21□□□□□ -0.46
PHRF1-202ENST00000413872 IMUPQ9GZP8 106 aa12.21□□□□□ -0.46
PHRF1-202ENST00000413872 MTORP42345 2549 aa12.2□□□□□ -0.46
PHRF1-202ENST00000413872 UQCRQO14949 82 aa12.2□□□□□ -0.46
PHRF1-202ENST00000413872 KIF25-AS1Q9Y6Z4 181 aa12.2□□□□□ -0.46
PHRF1-202ENST00000413872 C20orf197Q8N268 126 aa12.19□□□□□ -0.46
PHRF1-202ENST00000413872 NTM-AS1Q6ZSK4 140 aa12.19□□□□□ -0.46
PHRF1-202ENST00000413872 PKD1L2Q7Z442 2459 aa12.18□□□□□ -0.46
PHRF1-202ENST00000413872 PRYO14603 147 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 Q6JHZ5 121 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 FSHBP01225 129 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 HRCT1Q6UXD1 115 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 FAM19A4Q96LR4 140 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 H3BNG1 76 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 Q8N814 137 aa12.17□□□□□ -0.46
PHRF1-202ENST00000413872 KRTAP24-1Q3LI83 254 aa12.16□□□□□ -0.46
PHRF1-202ENST00000413872 TSPEAR-AS2P59090 65 aa12.15□□□□□ -0.46
PHRF1-202ENST00000413872 LINC01556Q5JQF7 62 aa12.15□□□□□ -0.46
PHRF1-202ENST00000413872 A0A096LNJ9 63 aa12.15□□□□□ -0.46
PHRF1-202ENST00000413872 MRPL55Q7Z7F7 128 aaKnown RBP12.15□□□□□ -0.46
PHRF1-202ENST00000413872 FAM19A3Q7Z5A8 133 aa12.14□□□□□ -0.47
PHRF1-202ENST00000413872 AGRNO00468 2067 aa12.14□□□□□ -0.47
PHRF1-202ENST00000413872 CELA1Q9UNI1 258 aa12.14□□□□□ -0.47
PHRF1-202ENST00000413872 C1orf137Q5JT78 98 aa12.14□□□□□ -0.47
PHRF1-202ENST00000413872 WFDC13Q8IUB5 93 aa12.13□□□□□ -0.47
PHRF1-202ENST00000413872 NDUFC1O43677 76 aa12.12□□□□□ -0.47
PHRF1-202ENST00000413872 KLK9Q2XQG4 91 aa12.11□□□□□ -0.47
PHRF1-202ENST00000413872 PTPRBP23467 1997 aa12.1□□□□□ -0.47
PHRF1-202ENST00000413872 ADAMTSL4-AS1Q5T5F5 129 aa12.1□□□□□ -0.47
PHRF1-202ENST00000413872 TET2Q6N021 2002 aaPredicted RBP12.1□□□□□ -0.47
PHRF1-202ENST00000413872 Q6ZRU5 148 aa12.1□□□□□ -0.47
PHRF1-202ENST00000413872 FAM240AA0A1B0GVK7 77 aa12.09□□□□□ -0.47
PHRF1-202ENST00000413872 EPG5Q9HCE0 2579 aa12.09□□□□□ -0.47
PHRF1-202ENST00000413872 ANKRD17O75179 2603 aaKnown RBP12.09□□□□□ -0.47
PHRF1-202ENST00000413872 FAM236DA0A1B0GTK5 79 aa12.08□□□□□ -0.48
PHRF1-202ENST00000413872 FAM236CP0DP71 79 aa12.08□□□□□ -0.48
PHRF1-202ENST00000413872 ATP5EP56381 51 aaPredicted RBP12.08□□□□□ -0.48
PHRF1-202ENST00000413872 PRR3P79522 188 aaKnown RBP12.08□□□□□ -0.48
PHRF1-202ENST00000413872 SERP2Q8N6R1 65 aa12.08□□□□□ -0.48
PHRF1-202ENST00000413872 MDFIQ99750 246 aa12.08□□□□□ -0.48
PHRF1-202ENST00000413872 C3orf22Q8N5N4 141 aa12.07□□□□□ -0.48
PHRF1-202ENST00000413872 X6R8D5 127 aa12.06□□□□□ -0.48
PHRF1-202ENST00000413872 LINC01546A6NGU7 62 aa12.06□□□□□ -0.48
PHRF1-202ENST00000413872 LINC00315P59091 139 aa12.06□□□□□ -0.48
PHRF1-202ENST00000413872 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
PHRF1-202ENST00000413872 ESRGQ1W209 222 aa12.05□□□□□ -0.48
PHRF1-202ENST00000413872 IGLV5-39A0A0G2JS06 123 aa12.05□□□□□ -0.48
PHRF1-202ENST00000413872 Q9BRP9 147 aa12.05□□□□□ -0.48
PHRF1-202ENST00000413872 POLQO75417 2590 aa12.05□□□□□ -0.48
PHRF1-202ENST00000413872 Q8N9L7 120 aa12.05□□□□□ -0.48
PHRF1-202ENST00000413872 IGHV3OR16-9A0A0B4J2B5 98 aa12.04□□□□□ -0.48
PHRF1-202ENST00000413872 A0A087WYN8 130 aa12.02□□□□□ -0.48
PHRF1-202ENST00000413872 SBSPONQ8IVN8 264 aa12.02□□□□□ -0.48
PHRF1-202ENST00000413872 ACANP16112 2415 aa12.02□□□□□ -0.49
PHRF1-202ENST00000413872 PRR15LQ9BU68 103 aa12.01□□□□□ -0.49
PHRF1-202ENST00000413872 K7ERS5 55 aa12□□□□□ -0.49
PHRF1-202ENST00000413872 LINC00575Q6W349 94 aa12□□□□□ -0.49
PHRF1-202ENST00000413872 COL27A1Q8IZC6 1860 aaPredicted RBP12□□□□□ -0.49
PHRF1-202ENST00000413872 PCSK5Q92824 1860 aa12□□□□□ -0.49
PHRF1-202ENST00000413872 C22orf24Q9Y442 160 aa11.99□□□□□ -0.49
PHRF1-202ENST00000413872 V9GYY9 64 aa11.99□□□□□ -0.49
PHRF1-202ENST00000413872 LIMD2Q9BT23 127 aa11.97□□□□□ -0.49
PHRF1-202ENST00000413872 XGP55808 180 aa11.97□□□□□ -0.49
PHRF1-202ENST00000413872 SPTSSBQ8NFR3 76 aa11.97□□□□□ -0.49
PHRF1-202ENST00000413872 Q8NAQ8 132 aa11.96□□□□□ -0.49
PHRF1-202ENST00000413872 IGLV5-45A0A087WSX0 123 aa11.95□□□□□ -0.5
PHRF1-202ENST00000413872 F8P00451 2351 aa11.95□□□□□ -0.5
PHRF1-202ENST00000413872 Q6Q795 121 aa11.95□□□□□ -0.5
PHRF1-202ENST00000413872 COX7CP15954 63 aa11.94□□□□□ -0.5
PHRF1-202ENST00000413872 LINC00337Q8N6G1 96 aa11.94□□□□□ -0.5
PHRF1-202ENST00000413872 A0A087WSZ3 146 aa11.93□□□□□ -0.5
PHRF1-202ENST00000413872 MPLKIPQ8TAP9 179 aa11.93□□□□□ -0.5
PHRF1-202ENST00000413872 SMCR5Q8TEV8 140 aa11.93□□□□□ -0.5
PHRF1-202ENST00000413872 SERP1Q9Y6X1 66 aa11.92□□□□□ -0.5
PHRF1-202ENST00000413872 PRLHP81277 87 aa11.92□□□□□ -0.5
PHRF1-202ENST00000413872 BRK1Q8WUW1 75 aa11.92□□□□□ -0.5
PHRF1-202ENST00000413872 TRAV7A0A075B6U4 112 aa11.91□□□□□ -0.5
PHRF1-202ENST00000413872 IGHV6-1A0A0B4J1U7 121 aa11.91□□□□□ -0.5
PHRF1-202ENST00000413872 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
PHRF1-202ENST00000413872 NBDYA0A0U1RRE5 68 aa11.9□□□□□ -0.5
PHRF1-202ENST00000413872 SNURFQ9Y675 71 aa11.9□□□□□ -0.5
PHRF1-202ENST00000413872 C6orf48Q9UBA6 75 aa11.89□□□□□ -0.51
PHRF1-202ENST00000413872 WWC2-AS2Q96NR7 200 aa11.89□□□□□ -0.51
PHRF1-202ENST00000413872 A0A096LNT2 108 aa11.88□□□□□ -0.51
PHRF1-202ENST00000413872 Q6ZVQ6 151 aa11.87□□□□□ -0.51
PHRF1-202ENST00000413872 TRBV7-6A0A0J9YX20 115 aa11.87□□□□□ -0.51
PHRF1-202ENST00000413872 LINC00167Q96N53 147 aa11.87□□□□□ -0.51
PHRF1-202ENST00000413872 CCDC179H3BU77 68 aa11.85□□□□□ -0.51
PHRF1-202ENST00000413872 LINC01547P58512 204 aaPredicted RBP11.85□□□□□ -0.51
PHRF1-202ENST00000413872 LINC00588Q9Y4M8 146 aa11.84□□□□□ -0.51
PHRF1-202ENST00000413872 MUC4Q99102 2169 aa11.84□□□□□ -0.51
PHRF1-202ENST00000413872 PRR4Q16378 134 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms