RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
CDC42-204ENST00000411827 HERV-K104P63124 156 aa12.21□□□□□ -0.45
CDC42-204ENST00000411827 SYCNQ0VAF6 134 aa12.21□□□□□ -0.45
CDC42-204ENST00000411827 WFDC2Q14508 124 aa12.21□□□□□ -0.45
CDC42-204ENST00000411827 CDPF1Q6NVV7 123 aa12.21□□□□□ -0.45
CDC42-204ENST00000411827 VAMP8Q9BV40 100 aa12.21□□□□□ -0.45
CDC42-204ENST00000411827 TRBV30A0A0K0K1B3 111 aa12.2□□□□□ -0.46
CDC42-204ENST00000411827 LINC00587B1AMM8 73 aa12.2□□□□□ -0.46
CDC42-204ENST00000411827 SMIM6P0DI80 62 aa12.2□□□□□ -0.46
CDC42-204ENST00000411827 MYMXA0A1B0GTQ4 84 aa12.19□□□□□ -0.46
CDC42-204ENST00000411827 S100A12P80511 92 aa12.19□□□□□ -0.46
CDC42-204ENST00000411827 CARD19Q96LW7 228 aa12.18□□□□□ -0.46
CDC42-204ENST00000411827 NDUFA12Q9UI09 145 aa12.18□□□□□ -0.46
CDC42-204ENST00000411827 ZNF625Q96I27 306 aaPredicted RBP12.16□□□□□ -0.46
CDC42-204ENST00000411827 ANKRD39Q53RE8 183 aa12.15□□□□□ -0.46
CDC42-204ENST00000411827 C9orf163Q8N9P6 203 aa12.15□□□□□ -0.46
CDC42-204ENST00000411827 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.14□□□□□ -0.47
CDC42-204ENST00000411827 COX17Q14061 63 aa12.14□□□□□ -0.47
CDC42-204ENST00000411827 C2orf82Q6UX34 121 aa12.14□□□□□ -0.47
CDC42-204ENST00000411827 LINC00526Q96FQ7 95 aa12.14□□□□□ -0.47
CDC42-204ENST00000411827 IGKV2D-26A0A0A0MRZ7 120 aa12.13□□□□□ -0.47
CDC42-204ENST00000411827 IGLV5-52A0A0A0MRZ9 124 aa12.13□□□□□ -0.47
CDC42-204ENST00000411827 UNQ6190/PRO20217Q6UXQ8 127 aa12.13□□□□□ -0.47
CDC42-204ENST00000411827 Q6ZRU5 148 aa12.13□□□□□ -0.47
CDC42-204ENST00000411827 DNAH2Q9P225 4427 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 SLPIP03973 132 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 TSPEAR-AS2P59090 65 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 CIRBPQ14011 172 aaKnown RBP12.12□□□□□ -0.47
CDC42-204ENST00000411827 MAJINQ3KP22 176 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 SPATA45Q537H7 98 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 PAM16Q9Y3D7 125 aa12.12□□□□□ -0.47
CDC42-204ENST00000411827 ZNF815PA8K554 130 aa12.11□□□□□ -0.47
CDC42-204ENST00000411827 DLEU1O43261 78 aa12.1□□□□□ -0.47
CDC42-204ENST00000411827 TLX1NBP0CAT3 122 aa12.1□□□□□ -0.47
CDC42-204ENST00000411827 C6orf48Q9UBA6 75 aa12.1□□□□□ -0.47
CDC42-204ENST00000411827 HERC2O95714 4834 aa12.1□□□□□ -0.47
CDC42-204ENST00000411827 LOC107984640A0A0U1RRK4 108 aa12.09□□□□□ -0.47
CDC42-204ENST00000411827 COX8AP10176 69 aa12.09□□□□□ -0.47
CDC42-204ENST00000411827 GCSHP23434 173 aa12.09□□□□□ -0.47
CDC42-204ENST00000411827 C10orf25Q5T742 122 aa12.09□□□□□ -0.47
CDC42-204ENST00000411827 NDUFC2-KCTD14E9PQ53 114 aa12.08□□□□□ -0.48
CDC42-204ENST00000411827 TIMM17BO60830 172 aa12.08□□□□□ -0.48
CDC42-204ENST00000411827 LINC00474Q9P2X8 69 aa12.08□□□□□ -0.48
CDC42-204ENST00000411827 ERG28Q9UKR5 140 aa12.08□□□□□ -0.48
CDC42-204ENST00000411827 A0A1B0GVY2 172 aa12.07□□□□□ -0.48
CDC42-204ENST00000411827 DNAH17Q9UFH2 4485 aa12.07□□□□□ -0.48
CDC42-204ENST00000411827 FAT2Q9NYQ8 4349 aa12.07□□□□□ -0.48
CDC42-204ENST00000411827 MEIG1Q5JSS6 88 aa12.06□□□□□ -0.48
CDC42-204ENST00000411827 SCGB1D4Q6XE38 83 aa12.06□□□□□ -0.48
CDC42-204ENST00000411827 PCP2Q8IVA1 136 aa12.06□□□□□ -0.48
CDC42-204ENST00000411827 BOD1L2Q8IYS8 172 aa12.06□□□□□ -0.48
CDC42-204ENST00000411827 A0A0J9YXY3 114 aa12.05□□□□□ -0.48
CDC42-204ENST00000411827 SLC25A34Q6PIV7 304 aa12.05□□□□□ -0.48
CDC42-204ENST00000411827 HECTD4Q9Y4D8 3996 aa12.04□□□□□ -0.48
CDC42-204ENST00000411827 KRTAP10-2P60368 255 aa12.04□□□□□ -0.48
CDC42-204ENST00000411827 SDIM1Q6ZPB5 146 aa12.04□□□□□ -0.48
CDC42-204ENST00000411827 C16orf90A8MZG2 172 aa12.03□□□□□ -0.48
CDC42-204ENST00000411827 TMEM238C9JI98 176 aa12.03□□□□□ -0.48
CDC42-204ENST00000411827 LINC00158P58513 81 aa12.03□□□□□ -0.48
CDC42-204ENST00000411827 Q6ZVH6 145 aa12.03□□□□□ -0.48
CDC42-204ENST00000411827 COPS9Q8WXC6 57 aa12.03□□□□□ -0.48
CDC42-204ENST00000411827 C12orf57Q99622 126 aa12.02□□□□□ -0.49
CDC42-204ENST00000411827 DYNC1H1Q14204 4646 aaKnown RBP12.01□□□□□ -0.49
CDC42-204ENST00000411827 PFN2P35080 140 aa12.01□□□□□ -0.49
CDC42-204ENST00000411827 C9orf116Q5BN46 136 aaPredicted RBP12.01□□□□□ -0.49
CDC42-204ENST00000411827 C14orf144Q96I85 54 aa12.01□□□□□ -0.49
CDC42-204ENST00000411827 SMIM13P0DJ93 91 aa12□□□□□ -0.49
CDC42-204ENST00000411827 RPL18AQ02543 176 aaKnown RBP12□□□□□ -0.49
CDC42-204ENST00000411827 TTTY13Q9BZ97 58 aa12□□□□□ -0.49
CDC42-204ENST00000411827 HIGD1BQ9P298 99 aa11.99□□□□□ -0.49
CDC42-204ENST00000411827 UQCR10Q9UDW1 63 aa11.99□□□□□ -0.49
CDC42-204ENST00000411827 KIAA1109Q2LD37 5005 aa11.99□□□□□ -0.49
CDC42-204ENST00000411827 PTTG1IPP53801 180 aa11.98□□□□□ -0.49
CDC42-204ENST00000411827 Q6ZRP5 223 aa11.98□□□□□ -0.49
CDC42-204ENST00000411827 LINC00518Q8N0U6 118 aa11.98□□□□□ -0.49
CDC42-204ENST00000411827 PPDPFQ9H3Y8 114 aa11.98□□□□□ -0.49
CDC42-204ENST00000411827 LOC107984156A0A0G2JMH3 177 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 IFITM1P13164 125 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 GAGE2BQ13066 116 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 ARL17AQ8IVW1 177 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 MIR7-3HGQ8N6C7 128 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 MIEN1Q9BRT3 115 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 SPANXDQ9BXN6 97 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 SPANXB1Q9NS25 103 aaPredicted RBP11.96□□□□□ -0.49
CDC42-204ENST00000411827 SPANXCQ9NY87 97 aa11.96□□□□□ -0.49
CDC42-204ENST00000411827 TSTD3H0UI37 97 aa11.95□□□□□ -0.5
CDC42-204ENST00000411827 LITAFQ99732 161 aa11.95□□□□□ -0.5
CDC42-204ENST00000411827 SND1-IT1Q9HBX3 110 aa11.95□□□□□ -0.5
CDC42-204ENST00000411827 A0A096LNI7 61 aa11.94□□□□□ -0.5
CDC42-204ENST00000411827 GAGE2EQ4V326 116 aa11.94□□□□□ -0.5
CDC42-204ENST00000411827 GAGE2DQ9UEU5 116 aa11.94□□□□□ -0.5
CDC42-204ENST00000411827 DNAH11Q96DT5 4516 aa11.94□□□□□ -0.5
CDC42-204ENST00000411827 PKHD1P08F94 4074 aa11.93□□□□□ -0.5
CDC42-204ENST00000411827 SRSF9Q13242 221 aaKnown RBP eCLIP11.93□□□□□ -0.5
CDC42-204ENST00000411827 PLA2G2DQ9UNK4 145 aa11.93□□□□□ -0.5
CDC42-204ENST00000411827 A0A0U1RRA0 63 aa11.92□□□□□ -0.5
CDC42-204ENST00000411827 RPL24P83731 157 aaKnown RBP11.92□□□□□ -0.5
CDC42-204ENST00000411827 LINC01620Q4KN68 170 aa11.92□□□□□ -0.5
CDC42-204ENST00000411827 Q6ZSA8 131 aa11.92□□□□□ -0.5
CDC42-204ENST00000411827 IGKV2-24A0A0C4DH68 120 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms