RNA–Protein interactions for RNA: ENST00000411739.6

NEDD1-202, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 2 BASIC

Gene NEDD1, Length 2,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-202ENST00000411739 GAGE2EQ4V326 116 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 LINC01561Q8N1V8 128 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 PLAC8Q9NZF1 115 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 GAGE2DQ9UEU5 116 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 A0A1W2PNN7 141 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 H0Y8G0 127 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 CKS1BP61024 79 aa7.55□□□□□ -1.2
NEDD1-202ENST00000411739 IGLV5-45A0A087WSX0 123 aa7.54□□□□□ -1.2
NEDD1-202ENST00000411739 PLA2G1BP04054 148 aaKnown RBP7.54□□□□□ -1.2
NEDD1-202ENST00000411739 Q6ZRP5 223 aa7.54□□□□□ -1.2
NEDD1-202ENST00000411739 IFI27L1Q96BM0 104 aa7.54□□□□□ -1.2
NEDD1-202ENST00000411739 C11orf86A6NJI1 115 aa7.54□□□□□ -1.2
NEDD1-202ENST00000411739 IGLC3P0DOY3 106 aa7.54□□□□□ -1.2
NEDD1-202ENST00000411739 KRTAP10-4P60372 401 aaPredicted RBP7.54□□□□□ -1.2
NEDD1-202ENST00000411739 FABP4P15090 132 aa7.53□□□□□ -1.2
NEDD1-202ENST00000411739 ZNF22P17026 224 aaPredicted RBP7.53□□□□□ -1.2
NEDD1-202ENST00000411739 RPL37AP61513 92 aaKnown RBP7.53□□□□□ -1.2
NEDD1-202ENST00000411739 RNF151Q2KHN1 245 aa7.53□□□□□ -1.2
NEDD1-202ENST00000411739 Q8IZM0 81 aa7.53□□□□□ -1.2
NEDD1-202ENST00000411739 FAM168BA1KXE4 195 aa7.53□□□□□ -1.2
NEDD1-202ENST00000411739 COX7B2Q8TF08 81 aa7.53□□□□□ -1.2
NEDD1-202ENST00000411739 CHTOPQ9Y3Y2 248 aaKnown RBP7.53□□□□□ -1.2
NEDD1-202ENST00000411739 LINC00474Q9P2X8 69 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 F8WDY8 70 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BKO60814 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BJP06899 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BOP23527 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BBP33778 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BDP58876 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BCP62807 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST2H2BEQ16778 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.52□□□□□ -1.21
NEDD1-202ENST00000411739 TMEM170BQ5T4T1 132 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BHQ93079 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BNQ99877 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 HIST1H2BMQ99879 126 aa7.52□□□□□ -1.21
NEDD1-202ENST00000411739 TRBV30A0A0K0K1B3 111 aa7.51□□□□□ -1.21
NEDD1-202ENST00000411739 H3BRM9 83 aa7.51□□□□□ -1.21
NEDD1-202ENST00000411739 ATP6V1G1O75348 118 aa7.51□□□□□ -1.21
NEDD1-202ENST00000411739 LEPROTL1O95214 131 aa7.51□□□□□ -1.21
NEDD1-202ENST00000411739 HNRNPA3P51991 378 aaKnown RBP7.51□□□□□ -1.21
NEDD1-202ENST00000411739 PKIGQ9Y2B9 76 aa7.51□□□□□ -1.21
NEDD1-202ENST00000411739 MYCBP2O75592 4640 aa7.5□□□□□ -1.21
NEDD1-202ENST00000411739 F8VRH5 84 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 TLX1NBP0CAT3 122 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 PHF5AQ7RTV0 110 aaKnown RBP7.49□□□□□ -1.21
NEDD1-202ENST00000411739 TRAV12-1A0A0B4J245 112 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 NDUFC2-KCTD14E9PQ53 114 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 FAM19A5Q7Z5A7 132 aaPredicted RBP7.49□□□□□ -1.21
NEDD1-202ENST00000411739 C7orf33Q8WU49 177 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 PMCHL2Q9BQD1 86 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 XAGE1AQ9HD64 81 aa7.49□□□□□ -1.21
NEDD1-202ENST00000411739 C9orf129Q5T035 196 aaKnown RBP7.48□□□□□ -1.21
NEDD1-202ENST00000411739 IGLV5-39A0A0G2JS06 123 aa7.47□□□□□ -1.21
NEDD1-202ENST00000411739 KRTAP7-1Q8IUC3 87 aa7.47□□□□□ -1.21
NEDD1-202ENST00000411739 ODF1Q14990 250 aa7.47□□□□□ -1.21
NEDD1-202ENST00000411739 ZNF625Q96I27 306 aaPredicted RBP7.47□□□□□ -1.21
NEDD1-202ENST00000411739 S100A1P23297 94 aa7.45□□□□□ -1.22
NEDD1-202ENST00000411739 CXCL5P42830 114 aa7.45□□□□□ -1.22
NEDD1-202ENST00000411739 HSPB8Q9UJY1 196 aa7.45□□□□□ -1.22
NEDD1-202ENST00000411739 LRP1Q07954 4544 aaKnown RBP7.45□□□□□ -1.22
NEDD1-202ENST00000411739 TMEM223A0PJW6 202 aa7.45□□□□□ -1.22
NEDD1-202ENST00000411739 PFN2P35080 140 aa7.45□□□□□ -1.22
NEDD1-202ENST00000411739 KRTAP11-1Q8IUC1 163 aa7.44□□□□□ -1.22
NEDD1-202ENST00000411739 SERTAD4-AS1Q5TG53 156 aa7.44□□□□□ -1.22
NEDD1-202ENST00000411739 PRR3P79522 188 aaKnown RBP7.43□□□□□ -1.22
NEDD1-202ENST00000411739 A0A0U1RRA0 63 aa7.42□□□□□ -1.22
NEDD1-202ENST00000411739 M0QXV9 152 aa7.42□□□□□ -1.22
NEDD1-202ENST00000411739 MAP1LC3CQ9BXW4 147 aa7.42□□□□□ -1.22
NEDD1-202ENST00000411739 PSORS1C2Q9UIG4 136 aa7.41□□□□□ -1.22
NEDD1-202ENST00000411739 ERG28Q9UKR5 140 aa7.4□□□□□ -1.22
NEDD1-202ENST00000411739 PKHD1L1Q86WI1 4243 aa7.4□□□□□ -1.22
NEDD1-202ENST00000411739 DPM2O94777 84 aa7.4□□□□□ -1.23
NEDD1-202ENST00000411739 TSPEAR-AS2P59090 65 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 C1orf137Q5JT78 98 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 C22orf24Q9Y442 160 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 FAT3Q8TDW7 4589 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 SYS1-DBNDD2H3BUS1 97 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 IGKCP01834 107 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 UBE2BP63146 152 aa7.39□□□□□ -1.23
NEDD1-202ENST00000411739 PLNP26678 52 aa7.38□□□□□ -1.23
NEDD1-202ENST00000411739 DMBT1Q9UGM3 2413 aaPredicted RBP7.38□□□□□ -1.23
NEDD1-202ENST00000411739 GAGE10A6NGK3 116 aa7.38□□□□□ -1.23
NEDD1-202ENST00000411739 COA6Q5JTJ3 125 aaKnown RBP7.38□□□□□ -1.23
NEDD1-202ENST00000411739 J3QL48 77 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 LINC00158P58513 81 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 SND1-IT1Q9HBX3 110 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 HERC1Q15751 4861 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 C3orf79P0CE67 100 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 KRTDAPP60985 99 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 NDUFA12Q9UI09 145 aa7.37□□□□□ -1.23
NEDD1-202ENST00000411739 SMIM13P0DJ93 91 aa7.36□□□□□ -1.23
NEDD1-202ENST00000411739 RPL37AP8A6NKH3 93 aa7.36□□□□□ -1.23
NEDD1-202ENST00000411739 LEPROTO15243 131 aa7.35□□□□□ -1.23
NEDD1-202ENST00000411739 MEIG1Q5JSS6 88 aa7.35□□□□□ -1.23
NEDD1-202ENST00000411739 Q8NDZ9 215 aa7.35□□□□□ -1.23
NEDD1-202ENST00000411739 KRTAP29-1A8MX34 341 aaPredicted RBP7.34□□□□□ -1.23
NEDD1-202ENST00000411739 SRSF9Q13242 221 aaKnown RBP eCLIP7.34□□□□□ -1.23
NEDD1-202ENST00000411739 MRPL55Q7Z7F7 128 aaKnown RBP7.34□□□□□ -1.23
NEDD1-202ENST00000411739 LINC00167Q96N53 147 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms