RNA–Protein interactions for RNA: ENST00000411642.6

TTC39A-207, Transcript of tetratricopeptide repeat domain 39A, humanhuman

TSL 1 (best)

Gene TTC39A, Length 931 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-207ENST00000411642 UNQ6190/PRO20217Q6UXQ8 127 aa6.43□□□□□ -1.38
TTC39A-207ENST00000411642 CIRBP-AS1Q8TBR5 109 aa6.43□□□□□ -1.38
TTC39A-207ENST00000411642 MRPL35Q9NZE8 188 aaKnown RBP6.43□□□□□ -1.38
TTC39A-207ENST00000411642 HSPB8Q9UJY1 196 aa6.43□□□□□ -1.38
TTC39A-207ENST00000411642 LOC107984640A0A0U1RRK4 108 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 F8VRH5 84 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 SMR3BP02814 79 aaPredicted RBP6.42□□□□□ -1.38
TTC39A-207ENST00000411642 CKS1BP61024 79 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 CIRBPQ14011 172 aaKnown RBP6.42□□□□□ -1.38
TTC39A-207ENST00000411642 RNF151Q2KHN1 245 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 TMEM170BQ5T4T1 132 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 SPACA4Q8TDM5 124 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 KRTAP17-1Q9BYP8 105 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 C6orf48Q9UBA6 75 aa6.42□□□□□ -1.38
TTC39A-207ENST00000411642 TRBV30A0A0K0K1B3 111 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 RPL18AQ02543 176 aaKnown RBP6.41□□□□□ -1.38
TTC39A-207ENST00000411642 ODF1Q14990 250 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 MAJINQ3KP22 176 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 COA6Q5JTJ3 125 aaKnown RBP6.41□□□□□ -1.38
TTC39A-207ENST00000411642 Q8N1X5 172 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 COX7B2Q8TF08 81 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 DPH3Q96FX2 82 aa6.41□□□□□ -1.38
TTC39A-207ENST00000411642 ABCA13Q86UQ4 5058 aa6.4□□□□□ -1.38
TTC39A-207ENST00000411642 A0A087WYN8 130 aa6.4□□□□□ -1.38
TTC39A-207ENST00000411642 CXCL5P42830 114 aa6.4□□□□□ -1.38
TTC39A-207ENST00000411642 PTTG1IPP53801 180 aa6.4□□□□□ -1.38
TTC39A-207ENST00000411642 GAGE2BQ13066 116 aa6.4□□□□□ -1.38
TTC39A-207ENST00000411642 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
TTC39A-207ENST00000411642 C9orf116Q5BN46 136 aaPredicted RBP6.39□□□□□ -1.39
TTC39A-207ENST00000411642 LINC00528Q8N1L1 170 aa6.39□□□□□ -1.39
TTC39A-207ENST00000411642 MAP1LC3CQ9BXW4 147 aa6.39□□□□□ -1.39
TTC39A-207ENST00000411642 LINC00474Q9P2X8 69 aa6.39□□□□□ -1.39
TTC39A-207ENST00000411642 EPM2AB3EWF7 344 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 TLX1NBP0CAT3 122 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 Q5VSD8 79 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 Q6ZRP5 223 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 STPG4Q8N801 248 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 PMCHL2Q9BQD1 86 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 VPS13BQ7Z7G8 4022 aa6.38□□□□□ -1.39
TTC39A-207ENST00000411642 TMEM223A0PJW6 202 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 NDUFC2-KCTD14E9PQ53 114 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 PLNP26678 52 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 GAGE2EQ4V326 116 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 KRTAP4-5Q9BYR2 181 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 PLAC8Q9NZF1 115 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 GAGE2DQ9UEU5 116 aa6.37□□□□□ -1.39
TTC39A-207ENST00000411642 SRRM2Q9UQ35 2752 aaKnown RBP6.36□□□□□ -1.39
TTC39A-207ENST00000411642 SYS1-DBNDD2H3BUS1 97 aa6.36□□□□□ -1.39
TTC39A-207ENST00000411642 DPM2O94777 84 aa6.36□□□□□ -1.39
TTC39A-207ENST00000411642 PCLOQ9Y6V0 5065 aa6.36□□□□□ -1.39
TTC39A-207ENST00000411642 IGKCP01834 107 aa6.35□□□□□ -1.39
TTC39A-207ENST00000411642 C3orf79P0CE67 100 aa6.34□□□□□ -1.39
TTC39A-207ENST00000411642 FLG2Q5D862 2391 aaPredicted RBP6.33□□□□□ -1.4
TTC39A-207ENST00000411642 A0A1W2PNN7 141 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 PLA2G1BP04054 148 aaKnown RBP6.33□□□□□ -1.4
TTC39A-207ENST00000411642 S100A6P06703 90 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 KRTDAPP60985 99 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 HERVK_113P61574 105 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 LINC01545Q5VT33 79 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 SFTA2Q6UW10 78 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 PET117Q6UWS5 81 aa6.33□□□□□ -1.4
TTC39A-207ENST00000411642 ZNF625Q96I27 306 aaPredicted RBP6.33□□□□□ -1.4
TTC39A-207ENST00000411642 FAM168BA1KXE4 195 aa6.32□□□□□ -1.4
TTC39A-207ENST00000411642 RPL37AP61513 92 aaKnown RBP6.32□□□□□ -1.4
TTC39A-207ENST00000411642 C9orf129Q5T035 196 aaKnown RBP6.32□□□□□ -1.4
TTC39A-207ENST00000411642 FAM19A5Q7Z5A7 132 aaPredicted RBP6.32□□□□□ -1.4
TTC39A-207ENST00000411642 HIST3H2BBQ8N257 126 aa6.32□□□□□ -1.4
TTC39A-207ENST00000411642 C7orf33Q8WU49 177 aa6.32□□□□□ -1.4
TTC39A-207ENST00000411642 XAGE1AQ9HD64 81 aa6.32□□□□□ -1.4
TTC39A-207ENST00000411642 S100A2P29034 98 aa6.31□□□□□ -1.4
TTC39A-207ENST00000411642 PFN2P35080 140 aa6.31□□□□□ -1.4
TTC39A-207ENST00000411642 ERG28Q9UKR5 140 aa6.31□□□□□ -1.4
TTC39A-207ENST00000411642 LEPROTO15243 131 aa6.3□□□□□ -1.4
TTC39A-207ENST00000411642 TSPEAR-AS2P59090 65 aa6.3□□□□□ -1.4
TTC39A-207ENST00000411642 PLEKHB2Q96CS7 222 aa6.3□□□□□ -1.4
TTC39A-207ENST00000411642 HIST1H2BLQ99880 126 aa6.3□□□□□ -1.4
TTC39A-207ENST00000411642 NDUFA12Q9UI09 145 aa6.3□□□□□ -1.4
TTC39A-207ENST00000411642 C20orf202A1L168 122 aa6.29□□□□□ -1.4
TTC39A-207ENST00000411642 J3QQQ9 107 aa6.29□□□□□ -1.4
TTC39A-207ENST00000411642 M0QXV9 152 aa6.29□□□□□ -1.4
TTC39A-207ENST00000411642 KRTAP10-4P60372 401 aaPredicted RBP6.29□□□□□ -1.4
TTC39A-207ENST00000411642 SNRPEP62304 92 aaKnown RBP6.29□□□□□ -1.4
TTC39A-207ENST00000411642 COX17Q14061 63 aa6.29□□□□□ -1.4
TTC39A-207ENST00000411642 PHF5AQ7RTV0 110 aaKnown RBP6.29□□□□□ -1.4
TTC39A-207ENST00000411642 KRTAP7-1Q8IUC3 87 aa6.29□□□□□ -1.4
TTC39A-207ENST00000411642 MYMXA0A1B0GTQ4 84 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 E9PLD3 99 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 INAFM2P0DMQ5 153 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 LGALS3P17931 250 aaKnown RBP6.28□□□□□ -1.4
TTC39A-207ENST00000411642 HERV-K104P63124 156 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 MEIG1Q5JSS6 88 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 SERTAD4-AS1Q5TG53 156 aa6.28□□□□□ -1.4
TTC39A-207ENST00000411642 PKHD1L1Q86WI1 4243 aa6.27□□□□□ -1.41
TTC39A-207ENST00000411642 A0A0U1RRA0 63 aa6.27□□□□□ -1.41
TTC39A-207ENST00000411642 LINC00158P58513 81 aa6.27□□□□□ -1.41
TTC39A-207ENST00000411642 SND1-IT1Q9HBX3 110 aa6.27□□□□□ -1.41
TTC39A-207ENST00000411642 MYCBP2O75592 4640 aa6.26□□□□□ -1.41
TTC39A-207ENST00000411642 C5orf52A6NGY3 159 aa6.26□□□□□ -1.41
TTC39A-207ENST00000411642 SMIM13P0DJ93 91 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms