RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RIGQ13278 110 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 PCOTHQ58A44 107 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 CT83Q5H943 113 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 COX6B2Q6YFQ2 88 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 TEX43Q6ZNM6 134 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM231DQ6ZW35 169 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM19A1Q7Z5A9 133 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 CBLN2Q8IUK8 224 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 Q8IZM0 81 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 NRACQ8N912 160 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 NKAPP1Q8N9T2 125 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 C2orf88Q9BSF0 95 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 HIGD2AQ9BW72 106 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 GNB1LQ9BYB4 327 aa1.31□□□□□ -2.2
RNU4-53P-201ENST00000410828 FCGBPQ9Y6R7 5405 aaPredicted RBP1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGLV4-3A0A075B6K6 122 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 TRBV24-1A0A075B6N3 115 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 KANTRA0A1W2PQU2 76 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 SLC25A20O43772 301 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 CKS2P33552 79 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 RPS29P62273 56 aaKnown RBP1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 SEC11AP67812 179 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 ZNF345Q14585 488 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM104BQ5XKR9 115 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 Q8NBF4 154 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 TMEM141Q96I45 108 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 SPRR4Q96PI1 79 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 SMIM2Q9BVW6 85 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 TMEM126AQ9H061 195 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 VCX2Q9H322 139 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 GEMIN7Q9H840 131 aaKnown RBP1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 PYGO1Q9Y3Y4 419 aa1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 ZNF706Q9Y5V0 76 aaPredicted RBP1.3□□□□□ -2.2
RNU4-53P-201ENST00000410828 TMEM238C9JI98 176 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 D6R8Y8 96 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 TMEM250H0YL14 139 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 M0R378 163 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 SCO1O75880 301 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 NPYP01303 97 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 NPSP0C0P6 89 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 CFC1P0CG37 223 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 RAB5BP61020 215 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 HERVK_113P63121 156 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 RPL24P83731 157 aaKnown RBP1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 MRPL51Q4U2R6 128 aaKnown RBP1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 PAPPA-AS1Q5QFB9 102 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 SSBP3-AS1Q7Z2R9 100 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 LINC01551Q86U37 167 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 Q8N377 158 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 EIF5A2Q9GZV4 153 aaKnown RBP1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 OSTCQ9NRP0 149 aa1.29□□□□□ -2.2
RNU4-53P-201ENST00000410828 A0A1B0GW15 77 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 HMSDA8MTL9 139 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 F8W036 122 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 SMLR1H3BR10 107 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 ATP5LO75964 103 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 PPBPP02775 128 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 S100A8P05109 93 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 VPREB1P12018 145 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 CEBPGP53567 150 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 MOBPQ13875 183 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 PDZD11Q5EBL8 140 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 ZC2HC1BQ5TFG8 222 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 GAGE2AQ6NT46 116 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 C2orf66Q6UXQ4 117 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 FAM19A3Q7Z5A8 133 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 ORMDL3Q8N138 153 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 SMCR5Q8TEV8 140 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 COX7B2Q8TF08 81 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 AMELXQ99217 191 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 CDKN2A-AS1Q9UH64 79 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 NAT8BQ9UHF3 227 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 CYSLTR1Q9Y271 337 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 V9GYV3 84 aa1.28□□□□□ -2.2
RNU4-53P-201ENST00000410828 IGLV9-49A0A0B4J1Y8 123 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 LOC389332A0A1B0GUA5 103 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 C9orf92A6NGG3 77 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 IGIPA6NJ69 53 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 PRSS47A8MTI9 375 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 SMIM1B2RUZ4 78 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 KRTAP4-16G5E9R7 235 aaPredicted RBP1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 K7EMI3 77 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 G0S2P27469 103 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 PFN2P35080 140 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 RAB14P61106 215 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 FAM74A3Q4VXF1 159 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 ORMDL2Q53FV1 153 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 LINC00483Q53H64 154 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 TMEM136Q6ZRR5 245 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 AKAP14Q86UN6 197 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 PRELID3AQ96N28 172 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 TIMM17AQ99595 171 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 SMIM7Q9BQ49 75 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 SND1-IT1Q9HBX3 110 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 NEBP20929 6669 aa1.27□□□□□ -2.21
RNU4-53P-201ENST00000410828 IGLV5-45A0A087WSX0 123 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 ETDCA0A1B0GVM5 59 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 TINCRA0A1B0GVN0 87 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 SMIM27A0A1W2PRY6 76 aa1.26□□□□□ -2.21
RNU4-53P-201ENST00000410828 H3BRM9 83 aa1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms