RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 CNBPP62633 177 aaKnown RBP10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 KIAA0087Q14695 138 aa10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 CDPF1Q6NVV7 123 aa10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 CAMK2N2Q96S95 79 aa10.78□□□□□ -0.68
TSPAN4-208ENST00000409531 DYNC1H1Q14204 4646 aaKnown RBP10.77□□□□□ -0.68
TSPAN4-208ENST00000409531 E9PLD3 99 aa10.77□□□□□ -0.69
TSPAN4-208ENST00000409531 LEPROTO15243 131 aa10.77□□□□□ -0.69
TSPAN4-208ENST00000409531 SFTA2Q6UW10 78 aa10.77□□□□□ -0.69
TSPAN4-208ENST00000409531 STPG4Q8N801 248 aa10.77□□□□□ -0.69
TSPAN4-208ENST00000409531 LINC00526Q96FQ7 95 aa10.77□□□□□ -0.69
TSPAN4-208ENST00000409531 SYCNQ0VAF6 134 aa10.76□□□□□ -0.69
TSPAN4-208ENST00000409531 FUSP35637 526 aaKnown RBP eCLIP10.75□□□□□ -0.69
TSPAN4-208ENST00000409531 CARD19Q96LW7 228 aa10.75□□□□□ -0.69
TSPAN4-208ENST00000409531 KRTAP4-5Q9BYR2 181 aa10.75□□□□□ -0.69
TSPAN4-208ENST00000409531 J3QQQ9 107 aa10.74□□□□□ -0.69
TSPAN4-208ENST00000409531 LGALS3P17931 250 aaKnown RBP10.74□□□□□ -0.69
TSPAN4-208ENST00000409531 IGLV5-52A0A0A0MRZ9 124 aa10.73□□□□□ -0.69
TSPAN4-208ENST00000409531 CDK2AP2O75956 126 aa10.73□□□□□ -0.69
TSPAN4-208ENST00000409531 PYY3Q5JQD4 70 aa10.73□□□□□ -0.69
TSPAN4-208ENST00000409531 C2orf82Q6UX34 121 aa10.73□□□□□ -0.69
TSPAN4-208ENST00000409531 TRBV30A0A0K0K1B3 111 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 SLPIP03973 132 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 NMUP48645 174 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 RNF151Q2KHN1 245 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 UNQ6190/PRO20217Q6UXQ8 127 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 Q6ZRU5 148 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 PKIGQ9Y2B9 76 aa10.72□□□□□ -0.69
TSPAN4-208ENST00000409531 MYMXA0A1B0GTQ4 84 aa10.71□□□□□ -0.69
TSPAN4-208ENST00000409531 C9orf163Q8N9P6 203 aa10.71□□□□□ -0.69
TSPAN4-208ENST00000409531 NDUFA12Q9UI09 145 aa10.71□□□□□ -0.69
TSPAN4-208ENST00000409531 LOC105371267A0A1B0GV96 52 aa10.7□□□□□ -0.7
TSPAN4-208ENST00000409531 HERV-K104P63124 156 aa10.7□□□□□ -0.7
TSPAN4-208ENST00000409531 ANKRD39Q53RE8 183 aa10.7□□□□□ -0.7
TSPAN4-208ENST00000409531 VAMP8Q9BV40 100 aa10.7□□□□□ -0.7
TSPAN4-208ENST00000409531 GCSHP23434 173 aa10.69□□□□□ -0.7
TSPAN4-208ENST00000409531 TSPEAR-AS2P59090 65 aa10.69□□□□□ -0.7
TSPAN4-208ENST00000409531 MAJINQ3KP22 176 aa10.69□□□□□ -0.7
TSPAN4-208ENST00000409531 C10orf25Q5T742 122 aa10.69□□□□□ -0.7
TSPAN4-208ENST00000409531 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
TSPAN4-208ENST00000409531 LRP1BQ9NZR2 4599 aa10.68□□□□□ -0.7
TSPAN4-208ENST00000409531 IGKV2D-26A0A0A0MRZ7 120 aa10.68□□□□□ -0.7
TSPAN4-208ENST00000409531 C6orf48Q9UBA6 75 aa10.68□□□□□ -0.7
TSPAN4-208ENST00000409531 KRTAP10-1P60331 282 aa10.67□□□□□ -0.7
TSPAN4-208ENST00000409531 LINC00587B1AMM8 73 aa10.66□□□□□ -0.7
TSPAN4-208ENST00000409531 LOC107984640A0A0U1RRK4 108 aa10.65□□□□□ -0.7
TSPAN4-208ENST00000409531 ZNF815PA8K554 130 aa10.65□□□□□ -0.7
TSPAN4-208ENST00000409531 SMIM6P0DI80 62 aa10.65□□□□□ -0.7
TSPAN4-208ENST00000409531 S100A12P80511 92 aa10.65□□□□□ -0.7
TSPAN4-208ENST00000409531 PAM16Q9Y3D7 125 aa10.65□□□□□ -0.7
TSPAN4-208ENST00000409531 COX17Q14061 63 aa10.64□□□□□ -0.71
TSPAN4-208ENST00000409531 SPATA45Q537H7 98 aa10.64□□□□□ -0.71
TSPAN4-208ENST00000409531 NDUFC2-KCTD14E9PQ53 114 aa10.63□□□□□ -0.71
TSPAN4-208ENST00000409531 TLX1NBP0CAT3 122 aa10.63□□□□□ -0.71
TSPAN4-208ENST00000409531 C9orf116Q5BN46 136 aaPredicted RBP10.63□□□□□ -0.71
TSPAN4-208ENST00000409531 ERG28Q9UKR5 140 aa10.63□□□□□ -0.71
TSPAN4-208ENST00000409531 DNAH5Q8TE73 4624 aa10.63□□□□□ -0.71
TSPAN4-208ENST00000409531 MEIG1Q5JSS6 88 aa10.62□□□□□ -0.71
TSPAN4-208ENST00000409531 CIRBPQ14011 172 aaKnown RBP10.61□□□□□ -0.71
TSPAN4-208ENST00000409531 LINC01620Q4KN68 170 aa10.61□□□□□ -0.71
TSPAN4-208ENST00000409531 SDIM1Q6ZPB5 146 aa10.61□□□□□ -0.71
TSPAN4-208ENST00000409531 PCP2Q8IVA1 136 aa10.61□□□□□ -0.71
TSPAN4-208ENST00000409531 TTTY13Q9BZ97 58 aa10.61□□□□□ -0.71
TSPAN4-208ENST00000409531 PFN2P35080 140 aa10.6□□□□□ -0.71
TSPAN4-208ENST00000409531 XGP55808 180 aa10.6□□□□□ -0.71
TSPAN4-208ENST00000409531 RPL18AQ02543 176 aaKnown RBP10.6□□□□□ -0.71
TSPAN4-208ENST00000409531 A0A0J9YXY3 114 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 COX8AP10176 69 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 LINC00158P58513 81 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 SCGB1D4Q6XE38 83 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 LINC00474Q9P2X8 69 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 HSPG2P98160 4391 aa10.59□□□□□ -0.71
TSPAN4-208ENST00000409531 TIMM17BO60830 172 aa10.58□□□□□ -0.72
TSPAN4-208ENST00000409531 SMIM13P0DJ93 91 aa10.58□□□□□ -0.72
TSPAN4-208ENST00000409531 PTTG1IPP53801 180 aa10.58□□□□□ -0.72
TSPAN4-208ENST00000409531 GAGE2BQ13066 116 aa10.58□□□□□ -0.72
TSPAN4-208ENST00000409531 Q6ZRP5 223 aa10.58□□□□□ -0.72
TSPAN4-208ENST00000409531 DLEU1O43261 78 aa10.57□□□□□ -0.72
TSPAN4-208ENST00000409531 GAGE2EQ4V326 116 aa10.57□□□□□ -0.72
TSPAN4-208ENST00000409531 BOD1L2Q8IYS8 172 aa10.57□□□□□ -0.72
TSPAN4-208ENST00000409531 Q8N1X5 172 aa10.57□□□□□ -0.72
TSPAN4-208ENST00000409531 GAGE2DQ9UEU5 116 aa10.57□□□□□ -0.72
TSPAN4-208ENST00000409531 APOBP04114 4563 aaKnown RBP10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 A0A096LNI7 61 aa10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 IGKV2-24A0A0C4DH68 120 aa10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 SLC25A34Q6PIV7 304 aa10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 C14orf144Q96I85 54 aa10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 FAM30AQ9NZY2 134 aa10.56□□□□□ -0.72
TSPAN4-208ENST00000409531 A0A0U1RRA0 63 aa10.55□□□□□ -0.72
TSPAN4-208ENST00000409531 TMEM238C9JI98 176 aa10.55□□□□□ -0.72
TSPAN4-208ENST00000409531 MIR7-3HGQ8N6C7 128 aa10.54□□□□□ -0.72
TSPAN4-208ENST00000409531 Q6ZSA8 131 aa10.53□□□□□ -0.72
TSPAN4-208ENST00000409531 DPH3Q96FX2 82 aa10.53□□□□□ -0.72
TSPAN4-208ENST00000409531 C12orf57Q99622 126 aa10.53□□□□□ -0.72
TSPAN4-208ENST00000409531 SND1-IT1Q9HBX3 110 aa10.53□□□□□ -0.72
TSPAN4-208ENST00000409531 SPACA4Q8TDM5 124 aa10.52□□□□□ -0.73
TSPAN4-208ENST00000409531 XAGE1AQ9HD64 81 aa10.52□□□□□ -0.73
TSPAN4-208ENST00000409531 CHTF8P0CG12 524 aa10.51□□□□□ -0.73
TSPAN4-208ENST00000409531 Q6ZVH6 145 aa10.51□□□□□ -0.73
TSPAN4-208ENST00000409531 LITAFQ99732 161 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 126.1 ms