RNA–Protein interactions for RNA: ENST00000409375.1

AP1S3-204, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 3 BASIC

Gene AP1S3, Length 552 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-204ENST00000409375 TRBV30A0A0K0K1B3 111 aa9.99□□□□□ -0.81
AP1S3-204ENST00000409375 HERV-K104P63124 156 aa9.99□□□□□ -0.81
AP1S3-204ENST00000409375 LINC00518Q8N0U6 118 aa9.99□□□□□ -0.81
AP1S3-204ENST00000409375 LINC00526Q96FQ7 95 aa9.99□□□□□ -0.81
AP1S3-204ENST00000409375 NDUFA12Q9UI09 145 aa9.99□□□□□ -0.81
AP1S3-204ENST00000409375 IGKV2D-26A0A0A0MRZ7 120 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 LINC00587B1AMM8 73 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 RNF151Q2KHN1 245 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 SPATA45Q537H7 98 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 PGPEP1Q9NXJ5 209 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 PAM16Q9Y3D7 125 aa9.97□□□□□ -0.81
AP1S3-204ENST00000409375 IGLV5-52A0A0A0MRZ9 124 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 TSPEAR-AS2P59090 65 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 C2orf82Q6UX34 121 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 UNQ6190/PRO20217Q6UXQ8 127 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 Q6ZRU5 148 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 C12orf57Q99622 126 aa9.96□□□□□ -0.82
AP1S3-204ENST00000409375 ZNF815PA8K554 130 aa9.95□□□□□ -0.82
AP1S3-204ENST00000409375 ZNF625Q96I27 306 aaPredicted RBP9.95□□□□□ -0.82
AP1S3-204ENST00000409375 FRAS1Q86XX4 4008 aa9.94□□□□□ -0.82
AP1S3-204ENST00000409375 DNAH17Q9UFH2 4485 aa9.94□□□□□ -0.82
AP1S3-204ENST00000409375 MEIG1Q5JSS6 88 aa9.94□□□□□ -0.82
AP1S3-204ENST00000409375 C9orf163Q8N9P6 203 aa9.94□□□□□ -0.82
AP1S3-204ENST00000409375 HYDINQ4G0P3 5121 aa9.94□□□□□ -0.82
AP1S3-204ENST00000409375 CIRBPQ14011 172 aaKnown RBP9.93□□□□□ -0.82
AP1S3-204ENST00000409375 COX17Q14061 63 aa9.93□□□□□ -0.82
AP1S3-204ENST00000409375 C6orf48Q9UBA6 75 aa9.93□□□□□ -0.82
AP1S3-204ENST00000409375 SLPIP03973 132 aa9.92□□□□□ -0.82
AP1S3-204ENST00000409375 C10orf25Q5T742 122 aa9.92□□□□□ -0.82
AP1S3-204ENST00000409375 SCGB1D4Q6XE38 83 aa9.92□□□□□ -0.82
AP1S3-204ENST00000409375 LOC107984640A0A0U1RRK4 108 aa9.91□□□□□ -0.82
AP1S3-204ENST00000409375 COX8AP10176 69 aa9.91□□□□□ -0.82
AP1S3-204ENST00000409375 ERG28Q9UKR5 140 aa9.91□□□□□ -0.82
AP1S3-204ENST00000409375 PCP2Q8IVA1 136 aa9.9□□□□□ -0.82
AP1S3-204ENST00000409375 NDUFC2-KCTD14E9PQ53 114 aa9.89□□□□□ -0.83
AP1S3-204ENST00000409375 TLX1NBP0CAT3 122 aa9.89□□□□□ -0.83
AP1S3-204ENST00000409375 GCSHP23434 173 aa9.89□□□□□ -0.83
AP1S3-204ENST00000409375 SLC25A34Q6PIV7 304 aa9.89□□□□□ -0.83
AP1S3-204ENST00000409375 TTTY13Q9BZ97 58 aa9.89□□□□□ -0.83
AP1S3-204ENST00000409375 KMT2CQ8NEZ4 4911 aaKnown RBP9.89□□□□□ -0.83
AP1S3-204ENST00000409375 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 A0A1B0GVY2 172 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 DLEU1O43261 78 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 TIMM17BO60830 172 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 PFN2P35080 140 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 LINC00158P58513 81 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 KRTAP10-2P60368 255 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 RPL18AQ02543 176 aaKnown RBP9.88□□□□□ -0.83
AP1S3-204ENST00000409375 BOD1L2Q8IYS8 172 aa9.88□□□□□ -0.83
AP1S3-204ENST00000409375 RYR2Q92736 4967 aa9.87□□□□□ -0.83
AP1S3-204ENST00000409375 TMEM238C9JI98 176 aa9.87□□□□□ -0.83
AP1S3-204ENST00000409375 C9orf116Q5BN46 136 aaPredicted RBP9.87□□□□□ -0.83
AP1S3-204ENST00000409375 C14orf144Q96I85 54 aa9.87□□□□□ -0.83
AP1S3-204ENST00000409375 TP73-AS1Q9UF72 201 aa9.87□□□□□ -0.83
AP1S3-204ENST00000409375 FAT2Q9NYQ8 4349 aa9.87□□□□□ -0.83
AP1S3-204ENST00000409375 SMIM13P0DJ93 91 aa9.86□□□□□ -0.83
AP1S3-204ENST00000409375 LINC00474Q9P2X8 69 aa9.86□□□□□ -0.83
AP1S3-204ENST00000409375 A0A0U1RRA0 63 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 C16orf90A8MZG2 172 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 GAGE2BQ13066 116 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 SDIM1Q6ZPB5 146 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 COPS9Q8WXC6 57 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 UQCR10Q9UDW1 63 aa9.84□□□□□ -0.83
AP1S3-204ENST00000409375 GAGE2EQ4V326 116 aa9.83□□□□□ -0.84
AP1S3-204ENST00000409375 Q6ZVH6 145 aa9.83□□□□□ -0.84
AP1S3-204ENST00000409375 MIEN1Q9BRT3 115 aa9.83□□□□□ -0.84
AP1S3-204ENST00000409375 GAGE2DQ9UEU5 116 aa9.83□□□□□ -0.84
AP1S3-204ENST00000409375 DNAH11Q96DT5 4516 aa9.83□□□□□ -0.84
AP1S3-204ENST00000409375 TSTD3H0UI37 97 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 FUSP35637 526 aaKnown RBP eCLIP9.82□□□□□ -0.84
AP1S3-204ENST00000409375 PTTG1IPP53801 180 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 LINC01620Q4KN68 170 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 Q6ZRP5 223 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 C2orf91Q6ZV80 131 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 MIR7-3HGQ8N6C7 128 aa9.82□□□□□ -0.84
AP1S3-204ENST00000409375 SRSF9Q13242 221 aaKnown RBP eCLIP9.81□□□□□ -0.84
AP1S3-204ENST00000409375 HIGD1BQ9P298 99 aa9.81□□□□□ -0.84
AP1S3-204ENST00000409375 A0A096LNI7 61 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 IGKV2-24A0A0C4DH68 120 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 LITAFQ99732 161 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 SPANXDQ9BXN6 97 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 PRO1933Q9H354 126 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 SND1-IT1Q9HBX3 110 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 SPANXB1Q9NS25 103 aaPredicted RBP9.8□□□□□ -0.84
AP1S3-204ENST00000409375 SPANXCQ9NY87 97 aa9.8□□□□□ -0.84
AP1S3-204ENST00000409375 IFITM1P13164 125 aa9.79□□□□□ -0.84
AP1S3-204ENST00000409375 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
AP1S3-204ENST00000409375 HECTD4Q9Y4D8 3996 aa9.79□□□□□ -0.84
AP1S3-204ENST00000409375 XAGE1AQ9HD64 81 aa9.78□□□□□ -0.84
AP1S3-204ENST00000409375 ADAMTSL4-AS1Q5T5F5 129 aa9.77□□□□□ -0.85
AP1S3-204ENST00000409375 DAND5Q8N907 189 aa9.77□□□□□ -0.85
AP1S3-204ENST00000409375 HIST1H4GQ99525 98 aa9.77□□□□□ -0.85
AP1S3-204ENST00000409375 HNRNPA3P51991 378 aaKnown RBP9.76□□□□□ -0.85
AP1S3-204ENST00000409375 RPL24P83731 157 aaKnown RBP9.76□□□□□ -0.85
AP1S3-204ENST00000409375 SPACA4Q8TDM5 124 aa9.76□□□□□ -0.85
AP1S3-204ENST00000409375 PPDPFQ9H3Y8 114 aa9.76□□□□□ -0.85
AP1S3-204ENST00000409375 PKD1P98161 4303 aa9.75□□□□□ -0.85
AP1S3-204ENST00000409375 LOC107984156A0A0G2JMH3 177 aa9.75□□□□□ -0.85
AP1S3-204ENST00000409375 KRTAP10-1P60331 282 aa9.75□□□□□ -0.85
AP1S3-204ENST00000409375 TAL2Q16559 108 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms