RNA–Protein interactions for RNA: ENST00000409225.2

CHMP3-203, Transcript of charged multivesicular body protein 3, humanhuman

TSL 2 BASIC

Gene CHMP3, Length 1,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-203ENST00000409225 PYGO1Q9Y3Y4 419 aa9.51□□□□□ -0.89
CHMP3-203ENST00000409225 SLC51BQ86UW2 128 aa9.5□□□□□ -0.89
CHMP3-203ENST00000409225 EIF5A2Q9GZV4 153 aaKnown RBP9.5□□□□□ -0.89
CHMP3-203ENST00000409225 RAB5AP20339 215 aa9.49□□□□□ -0.89
CHMP3-203ENST00000409225 C2orf88Q9BSF0 95 aa9.49□□□□□ -0.89
CHMP3-203ENST00000409225 F8VRH5 84 aa9.48□□□□□ -0.89
CHMP3-203ENST00000409225 PNRC1Q12796 327 aaPredicted RBP9.48□□□□□ -0.89
CHMP3-203ENST00000409225 FAM74A3Q4VXF1 159 aa9.48□□□□□ -0.89
CHMP3-203ENST00000409225 C3orf22Q8N5N4 141 aa9.48□□□□□ -0.89
CHMP3-203ENST00000409225 BATF3Q9NR55 127 aa9.48□□□□□ -0.89
CHMP3-203ENST00000409225 KRTAP13-3Q3SY46 172 aa9.47□□□□□ -0.89
CHMP3-203ENST00000409225 FP248Q71RG6 208 aaPredicted RBP9.47□□□□□ -0.89
CHMP3-203ENST00000409225 PRLHP81277 87 aa9.46□□□□□ -0.9
CHMP3-203ENST00000409225 IGKV2-28A0A075B6P5 120 aa9.45□□□□□ -0.9
CHMP3-203ENST00000409225 A0A1B0GW15 77 aa9.45□□□□□ -0.9
CHMP3-203ENST00000409225 IGKV2D-28P01615 120 aa9.45□□□□□ -0.9
CHMP3-203ENST00000409225 BLOC1S1P78537 153 aa9.45□□□□□ -0.9
CHMP3-203ENST00000409225 NKAPP1Q8N9T2 125 aa9.45□□□□□ -0.9
CHMP3-203ENST00000409225 SEC61BP60468 96 aaKnown RBP9.44□□□□□ -0.9
CHMP3-203ENST00000409225 MRPL54Q6P161 138 aaKnown RBP9.44□□□□□ -0.9
CHMP3-203ENST00000409225 IGLV5-37A0A075B6J1 123 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 SMIM27A0A1W2PRY6 76 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 F8W036 122 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 SCO1O75880 301 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 AMELXQ99217 191 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 VCX2Q9H322 139 aa9.43□□□□□ -0.9
CHMP3-203ENST00000409225 PPBPP02775 128 aa9.42□□□□□ -0.9
CHMP3-203ENST00000409225 SPAG11AQ6PDA7 123 aa9.42□□□□□ -0.9
CHMP3-203ENST00000409225 FAM19A1Q7Z5A9 133 aa9.42□□□□□ -0.9
CHMP3-203ENST00000409225 CDKN2A-AS1Q9UH64 79 aa9.42□□□□□ -0.9
CHMP3-203ENST00000409225 SRP19P09132 144 aaKnown RBP9.41□□□□□ -0.9
CHMP3-203ENST00000409225 CXCL5P42830 114 aa9.41□□□□□ -0.9
CHMP3-203ENST00000409225 ALKAL2Q6UX46 152 aa9.41□□□□□ -0.9
CHMP3-203ENST00000409225 C2orf66Q6UXQ4 117 aa9.41□□□□□ -0.9
CHMP3-203ENST00000409225 PRELID3AQ96N28 172 aa9.41□□□□□ -0.9
CHMP3-203ENST00000409225 CYSLTR1Q9Y271 337 aa9.41□□□□□ -0.9
CHMP3-203ENST00000409225 LOC389332A0A1B0GUA5 103 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 S100A8P05109 93 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 RPL23P62829 140 aaKnown RBP9.4□□□□□ -0.9
CHMP3-203ENST00000409225 HERVK_113P63121 156 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 ADIRFQ15847 76 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 TMEM136Q6ZRR5 245 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 FAM19A3Q7Z5A8 133 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
CHMP3-203ENST00000409225 RAB5BP61020 215 aa9.39□□□□□ -0.91
CHMP3-203ENST00000409225 PLEKHB2Q96CS7 222 aa9.39□□□□□ -0.91
CHMP3-203ENST00000409225 TMEM238C9JI98 176 aa9.38□□□□□ -0.91
CHMP3-203ENST00000409225 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
CHMP3-203ENST00000409225 A0A1B0GXF2 115 aa9.37□□□□□ -0.91
CHMP3-203ENST00000409225 TMEM126AQ9H061 195 aa9.37□□□□□ -0.91
CHMP3-203ENST00000409225 SEC11AP67812 179 aa9.36□□□□□ -0.91
CHMP3-203ENST00000409225 CBLN2Q8IUK8 224 aa9.36□□□□□ -0.91
CHMP3-203ENST00000409225 COX7B2Q8TF08 81 aa9.35□□□□□ -0.91
CHMP3-203ENST00000409225 IGIPA6NJ69 53 aa9.34□□□□□ -0.91
CHMP3-203ENST00000409225 SMIM1B2RUZ4 78 aa9.34□□□□□ -0.91
CHMP3-203ENST00000409225 TCTE3Q8IZS6 198 aa9.34□□□□□ -0.91
CHMP3-203ENST00000409225 DAND5Q8N907 189 aa9.34□□□□□ -0.91
CHMP3-203ENST00000409225 MAP1LC3AQ9H492 121 aa9.34□□□□□ -0.91
CHMP3-203ENST00000409225 PRSS47A8MTI9 375 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 M0R378 163 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 NPSP0C0P6 89 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 Q8N8P6 123 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 Q8NBF4 154 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 HIGD2AQ9BW72 106 aa9.33□□□□□ -0.92
CHMP3-203ENST00000409225 PDZD11Q5EBL8 140 aa9.32□□□□□ -0.92
CHMP3-203ENST00000409225 GNB1LQ9BYB4 327 aa9.32□□□□□ -0.92
CHMP3-203ENST00000409225 NAT8Q9UHE5 227 aa9.32□□□□□ -0.92
CHMP3-203ENST00000409225 LORP23490 312 aaPredicted RBP9.31□□□□□ -0.92
CHMP3-203ENST00000409225 MT1HP80294 61 aa9.31□□□□□ -0.92
CHMP3-203ENST00000409225 ORMDL2Q53FV1 153 aa9.31□□□□□ -0.92
CHMP3-203ENST00000409225 SPRR4Q96PI1 79 aa9.31□□□□□ -0.92
CHMP3-203ENST00000409225 GHRHP01286 108 aa9.3□□□□□ -0.92
CHMP3-203ENST00000409225 CFC1BP0CG36 223 aa9.3□□□□□ -0.92
CHMP3-203ENST00000409225 PAPPA-AS1Q5QFB9 102 aa9.3□□□□□ -0.92
CHMP3-203ENST00000409225 LAMTOR2Q9Y2Q5 125 aa9.3□□□□□ -0.92
CHMP3-203ENST00000409225 A0A1B0GVG6 124 aa9.29□□□□□ -0.92
CHMP3-203ENST00000409225 VPREB1P12018 145 aa9.29□□□□□ -0.92
CHMP3-203ENST00000409225 SPINK8P0C7L1 97 aa9.28□□□□□ -0.92
CHMP3-203ENST00000409225 PFN2P35080 140 aa9.28□□□□□ -0.92
CHMP3-203ENST00000409225 KRTAP19-2Q3LHN2 52 aa9.28□□□□□ -0.92
CHMP3-203ENST00000409225 NDUFA12Q9UI09 145 aa9.28□□□□□ -0.92
CHMP3-203ENST00000409225 SPINK1P00995 79 aa9.27□□□□□ -0.93
CHMP3-203ENST00000409225 ATP5L2Q7Z4Y8 100 aa9.27□□□□□ -0.93
CHMP3-203ENST00000409225 C9JQL5 133 aa9.26□□□□□ -0.93
CHMP3-203ENST00000409225 XP32Q5T750 250 aa9.26□□□□□ -0.93
CHMP3-203ENST00000409225 TIMM17AQ99595 171 aa9.26□□□□□ -0.93
CHMP3-203ENST00000409225 TINCRA0A1B0GVN0 87 aa9.25□□□□□ -0.93
CHMP3-203ENST00000409225 ATP5LO75964 103 aa9.25□□□□□ -0.93
CHMP3-203ENST00000409225 ZNF706Q9Y5V0 76 aaPredicted RBP9.25□□□□□ -0.93
CHMP3-203ENST00000409225 IGLV5-45A0A087WSX0 123 aa9.24□□□□□ -0.93
CHMP3-203ENST00000409225 RAB14P61106 215 aa9.24□□□□□ -0.93
CHMP3-203ENST00000409225 RPL24P83731 157 aaKnown RBP9.24□□□□□ -0.93
CHMP3-203ENST00000409225 SND1-IT1Q9HBX3 110 aa9.24□□□□□ -0.93
CHMP3-203ENST00000409225 K7EMI3 77 aa9.23□□□□□ -0.93
CHMP3-203ENST00000409225 Q8NDZ9 215 aa9.23□□□□□ -0.93
CHMP3-203ENST00000409225 TOMM6Q96B49 74 aa9.23□□□□□ -0.93
CHMP3-203ENST00000409225 KRTAP10-6P60371 365 aaPredicted RBP9.22□□□□□ -0.93
CHMP3-203ENST00000409225 Q8N377 158 aa9.21□□□□□ -0.94
CHMP3-203ENST00000409225 FAM19A2Q8N3H0 131 aa9.21□□□□□ -0.94
CHMP3-203ENST00000409225 SCGB3A1Q96QR1 104 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms