RNA–Protein interactions for RNA: ENST00000404694.3

CGREF1-205, Transcript of cell growth regulator with EF-hand domain 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CGREF1, Length 1,376 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CGREF1-205ENST00000404694 ABCA13Q86UQ4 5058 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 IGHV3OR16-9A0A0B4J2B5 98 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 CTAG1AP78358 180 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 COX6A2Q02221 97 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 HIGD1BQ9P298 99 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
CGREF1-205ENST00000404694 M0R143 59 aa10.86□□□□□ -0.67
CGREF1-205ENST00000404694 CLPSL2Q6UWE3 100 aa10.86□□□□□ -0.67
CGREF1-205ENST00000404694 CHCHD10Q8WYQ3 142 aaPredicted RBP10.86□□□□□ -0.67
CGREF1-205ENST00000404694 A0A087WZ39 114 aa10.85□□□□□ -0.67
CGREF1-205ENST00000404694 MYMXA0A1B0GTQ4 84 aa10.85□□□□□ -0.67
CGREF1-205ENST00000404694 Q8N1X5 172 aa10.85□□□□□ -0.67
CGREF1-205ENST00000404694 IGHV1-58A0A0C4DH39 117 aa10.84□□□□□ -0.67
CGREF1-205ENST00000404694 J3QQQ9 107 aa10.84□□□□□ -0.67
CGREF1-205ENST00000404694 LGALS3P17931 250 aaKnown RBP10.84□□□□□ -0.67
CGREF1-205ENST00000404694 XGP55808 180 aa10.84□□□□□ -0.67
CGREF1-205ENST00000404694 LBHQ53QV2 105 aaPredicted RBP10.84□□□□□ -0.67
CGREF1-205ENST00000404694 C2orf91Q6ZV80 131 aa10.84□□□□□ -0.67
CGREF1-205ENST00000404694 C1orf43Q9BWL3 253 aa10.84□□□□□ -0.67
CGREF1-205ENST00000404694 XCL1P47992 114 aa10.83□□□□□ -0.68
CGREF1-205ENST00000404694 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.82□□□□□ -0.68
CGREF1-205ENST00000404694 ZNF815PA8K554 130 aa10.82□□□□□ -0.68
CGREF1-205ENST00000404694 IGLV5-39A0A0G2JS06 123 aa10.81□□□□□ -0.68
CGREF1-205ENST00000404694 COX7A2LO14548 114 aa10.81□□□□□ -0.68
CGREF1-205ENST00000404694 TTTY13Q9BZ97 58 aa10.81□□□□□ -0.68
CGREF1-205ENST00000404694 IGLV10-54A0A075B6I4 117 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 SMIM1B2RUZ4 78 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 HSD52Q0P140 79 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 FOXI1Q12951 378 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 TP73-AS1Q9UF72 201 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 DNAH8Q96JB1 4490 aa10.8□□□□□ -0.68
CGREF1-205ENST00000404694 GAGE12HA6NDE8 117 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 APOMO95445 188 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 SPINK8P0C7L1 97 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 TAL2Q16559 108 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 SNHG12Q9BXW3 62 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 FAT1Q14517 4588 aa10.79□□□□□ -0.68
CGREF1-205ENST00000404694 C5orf38Q86SI9 138 aa10.78□□□□□ -0.68
CGREF1-205ENST00000404694 MALP21145 153 aa10.77□□□□□ -0.68
CGREF1-205ENST00000404694 TSPEAR-AS2P59090 65 aa10.77□□□□□ -0.68
CGREF1-205ENST00000404694 KRTAP26-1Q6PEX3 210 aa10.77□□□□□ -0.68
CGREF1-205ENST00000404694 SFTA2Q6UW10 78 aa10.77□□□□□ -0.68
CGREF1-205ENST00000404694 SCGB1D4Q6XE38 83 aa10.77□□□□□ -0.68
CGREF1-205ENST00000404694 IGHV3-64A0A075B6Q5 118 aa10.77□□□□□ -0.69
CGREF1-205ENST00000404694 HAMPP81172 84 aa10.77□□□□□ -0.69
CGREF1-205ENST00000404694 FAM30AQ9NZY2 134 aa10.77□□□□□ -0.69
CGREF1-205ENST00000404694 HINT1P49773 126 aaPredicted RBP10.76□□□□□ -0.69
CGREF1-205ENST00000404694 NDUFA12Q9UI09 145 aa10.76□□□□□ -0.69
CGREF1-205ENST00000404694 USP17L23D6RBM5 183 aa10.75□□□□□ -0.69
CGREF1-205ENST00000404694 LINC01620Q4KN68 170 aa10.75□□□□□ -0.69
CGREF1-205ENST00000404694 C14orf177Q52M58 125 aa10.75□□□□□ -0.69
CGREF1-205ENST00000404694 BVES-AS1Q5T3Y7 98 aa10.75□□□□□ -0.69
CGREF1-205ENST00000404694 Q8IZM0 81 aa10.75□□□□□ -0.69
CGREF1-205ENST00000404694 BATFQ16520 125 aa10.74□□□□□ -0.69
CGREF1-205ENST00000404694 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
CGREF1-205ENST00000404694 COX7B2Q8TF08 81 aa10.74□□□□□ -0.69
CGREF1-205ENST00000404694 SPANXB1Q9NS25 103 aaPredicted RBP10.74□□□□□ -0.69
CGREF1-205ENST00000404694 EPM2AB3EWF7 344 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 NDUFA1O15239 70 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 PRSS2P07478 247 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 CXCL5P42830 114 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 COL5A1-AS1Q5SY13 56 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 Q6ZSA8 131 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 ORAOV1Q8WV07 137 aa10.73□□□□□ -0.69
CGREF1-205ENST00000404694 HERV-K104P63124 156 aa10.72□□□□□ -0.69
CGREF1-205ENST00000404694 HIST1H4GQ99525 98 aa10.72□□□□□ -0.69
CGREF1-205ENST00000404694 TMEM238C9JI98 176 aa10.71□□□□□ -0.69
CGREF1-205ENST00000404694 F8WDY8 70 aa10.71□□□□□ -0.69
CGREF1-205ENST00000404694 SMR3BP02814 79 aaPredicted RBP10.71□□□□□ -0.69
CGREF1-205ENST00000404694 Q5VSD8 79 aa10.71□□□□□ -0.69
CGREF1-205ENST00000404694 A0A0J9YXY3 114 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 A6NDN8 102 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 TIMM17BO60830 172 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 SRSF9Q13242 221 aaKnown RBP eCLIP10.7□□□□□ -0.7
CGREF1-205ENST00000404694 C6orf226Q5I0X4 101 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 CEND1Q8N111 149 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 TOMM7Q9P0U1 55 aa10.7□□□□□ -0.7
CGREF1-205ENST00000404694 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
CGREF1-205ENST00000404694 ZNF625Q96I27 306 aaPredicted RBP10.69□□□□□ -0.7
CGREF1-205ENST00000404694 CIRBPQ14011 172 aaKnown RBP10.68□□□□□ -0.7
CGREF1-205ENST00000404694 KIAA0087Q14695 138 aa10.68□□□□□ -0.7
CGREF1-205ENST00000404694 Q6ZVH6 145 aa10.68□□□□□ -0.7
CGREF1-205ENST00000404694 CKS1BP61024 79 aa10.67□□□□□ -0.7
CGREF1-205ENST00000404694 GVQW2A0A096LPI5 108 aaPredicted RBP10.66□□□□□ -0.7
CGREF1-205ENST00000404694 TMEM238LA0A1B0GVL6 79 aa10.66□□□□□ -0.7
CGREF1-205ENST00000404694 A6NJY4 79 aa10.66□□□□□ -0.7
CGREF1-205ENST00000404694 PTTG1IPP53801 180 aa10.66□□□□□ -0.7
CGREF1-205ENST00000404694 SPAG11BQ08648 103 aa10.66□□□□□ -0.7
CGREF1-205ENST00000404694 ZNF561-AS1K7EIQ3 104 aa10.65□□□□□ -0.7
CGREF1-205ENST00000404694 C15orf56Q8N910 161 aa10.65□□□□□ -0.7
CGREF1-205ENST00000404694 C2orf48Q96LS8 159 aa10.65□□□□□ -0.7
CGREF1-205ENST00000404694 FAM229AH3BQW9 127 aa10.65□□□□□ -0.71
CGREF1-205ENST00000404694 SCXQ7RTU7 201 aa10.65□□□□□ -0.71
CGREF1-205ENST00000404694 SPANXDQ9BXN6 97 aa10.65□□□□□ -0.71
CGREF1-205ENST00000404694 SPANXCQ9NY87 97 aa10.65□□□□□ -0.71
CGREF1-205ENST00000404694 SRRM2Q9UQ35 2752 aaKnown RBP10.64□□□□□ -0.71
CGREF1-205ENST00000404694 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
CGREF1-205ENST00000404694 COPS9Q8WXC6 57 aa10.64□□□□□ -0.71
CGREF1-205ENST00000404694 IFITM1P13164 125 aa10.63□□□□□ -0.71
CGREF1-205ENST00000404694 FXYD2P54710 66 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms