RNA–Protein interactions for RNA: ENST00000403807.3

VPREB1-202, Transcript of V-set pre-B cell surrogate light chain 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VPREB1, Length 755 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPREB1-202ENST00000403807 TMEM170BQ5T4T1 132 aa8.76□□□□□ -1.01
VPREB1-202ENST00000403807 C10orf25Q5T742 122 aa8.76□□□□□ -1.01
VPREB1-202ENST00000403807 SCXQ7RTU7 201 aa8.76□□□□□ -1.01
VPREB1-202ENST00000403807 COX7B2Q8TF08 81 aa8.76□□□□□ -1.01
VPREB1-202ENST00000403807 LINC00474Q9P2X8 69 aa8.76□□□□□ -1.01
VPREB1-202ENST00000403807 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.76□□□□□ -1.01
VPREB1-202ENST00000403807 TRBV30A0A0K0K1B3 111 aa8.75□□□□□ -1.01
VPREB1-202ENST00000403807 CXCL5P42830 114 aa8.75□□□□□ -1.01
VPREB1-202ENST00000403807 CIRBPQ14011 172 aaKnown RBP8.75□□□□□ -1.01
VPREB1-202ENST00000403807 C2orf82Q6UX34 121 aa8.75□□□□□ -1.01
VPREB1-202ENST00000403807 CIRBP-AS1Q8TBR5 109 aa8.75□□□□□ -1.01
VPREB1-202ENST00000403807 MAP1LC3CQ9BXW4 147 aa8.75□□□□□ -1.01
VPREB1-202ENST00000403807 A0A096LNI7 61 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 IGKV2-24A0A0C4DH68 120 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 SMR3BP02814 79 aaPredicted RBP8.74□□□□□ -1.01
VPREB1-202ENST00000403807 CHTF8P0CG12 524 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 GAGE2BQ13066 116 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 MAJINQ3KP22 176 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 Q8N1X5 172 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 C6orf48Q9UBA6 75 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 HSPG2P98160 4391 aa8.74□□□□□ -1.01
VPREB1-202ENST00000403807 PANO1I0J062 215 aa8.73□□□□□ -1.01
VPREB1-202ENST00000403807 RPL18AQ02543 176 aaKnown RBP8.73□□□□□ -1.01
VPREB1-202ENST00000403807 ODF1Q14990 250 aa8.73□□□□□ -1.01
VPREB1-202ENST00000403807 SPACA4Q8TDM5 124 aa8.73□□□□□ -1.01
VPREB1-202ENST00000403807 IGLV5-39A0A0G2JS06 123 aa8.72□□□□□ -1.01
VPREB1-202ENST00000403807 TLX1NBP0CAT3 122 aa8.72□□□□□ -1.01
VPREB1-202ENST00000403807 PTTG1IPP53801 180 aa8.72□□□□□ -1.01
VPREB1-202ENST00000403807 A0A087WYN8 130 aa8.71□□□□□ -1.02
VPREB1-202ENST00000403807 FAM229AH3BQW9 127 aa8.71□□□□□ -1.02
VPREB1-202ENST00000403807 TMEM223A0PJW6 202 aa8.7□□□□□ -1.02
VPREB1-202ENST00000403807 PLNP26678 52 aa8.7□□□□□ -1.02
VPREB1-202ENST00000403807 STPG4Q8N801 248 aa8.7□□□□□ -1.02
VPREB1-202ENST00000403807 KRTAP4-5Q9BYR2 181 aa8.7□□□□□ -1.02
VPREB1-202ENST00000403807 EPM2AB3EWF7 344 aa8.69□□□□□ -1.02
VPREB1-202ENST00000403807 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
VPREB1-202ENST00000403807 DPM2O94777 84 aa8.69□□□□□ -1.02
VPREB1-202ENST00000403807 C9orf116Q5BN46 136 aaPredicted RBP8.69□□□□□ -1.02
VPREB1-202ENST00000403807 PLAC8Q9NZF1 115 aa8.69□□□□□ -1.02
VPREB1-202ENST00000403807 ABCA13Q86UQ4 5058 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 NDUFC2-KCTD14E9PQ53 114 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 IGKCP01834 107 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 S100A6P06703 90 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 GAGE2EQ4V326 116 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 Q6ZRP5 223 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 GAGE2DQ9UEU5 116 aa8.68□□□□□ -1.02
VPREB1-202ENST00000403807 SFTA2Q6UW10 78 aa8.67□□□□□ -1.02
VPREB1-202ENST00000403807 PET117Q6UWS5 81 aa8.67□□□□□ -1.02
VPREB1-202ENST00000403807 LINC00528Q8N1L1 170 aa8.67□□□□□ -1.02
VPREB1-202ENST00000403807 PMCHL2Q9BQD1 86 aa8.67□□□□□ -1.02
VPREB1-202ENST00000403807 Q5VSD8 79 aa8.66□□□□□ -1.02
VPREB1-202ENST00000403807 PLA2G1BP04054 148 aaKnown RBP8.65□□□□□ -1.02
VPREB1-202ENST00000403807 C3orf79P0CE67 100 aa8.65□□□□□ -1.02
VPREB1-202ENST00000403807 S100A2P29034 98 aa8.65□□□□□ -1.02
VPREB1-202ENST00000403807 HERVK_113P61574 105 aa8.65□□□□□ -1.02
VPREB1-202ENST00000403807 KRTDAPP60985 99 aa8.64□□□□□ -1.03
VPREB1-202ENST00000403807 LINC01545Q5VT33 79 aa8.64□□□□□ -1.03
VPREB1-202ENST00000403807 A0A1W2PNN7 141 aa8.63□□□□□ -1.03
VPREB1-202ENST00000403807 C7orf33Q8WU49 177 aa8.63□□□□□ -1.03
VPREB1-202ENST00000403807 PLEKHB2Q96CS7 222 aa8.63□□□□□ -1.03
VPREB1-202ENST00000403807 C20orf202A1L168 122 aa8.62□□□□□ -1.03
VPREB1-202ENST00000403807 LEPROTO15243 131 aa8.62□□□□□ -1.03
VPREB1-202ENST00000403807 COX17Q14061 63 aa8.62□□□□□ -1.03
VPREB1-202ENST00000403807 HIST3H2BBQ8N257 126 aa8.62□□□□□ -1.03
VPREB1-202ENST00000403807 ZNF625Q96I27 306 aaPredicted RBP8.62□□□□□ -1.03
VPREB1-202ENST00000403807 PFN2P35080 140 aa8.61□□□□□ -1.03
VPREB1-202ENST00000403807 C9orf129Q5T035 196 aaKnown RBP8.61□□□□□ -1.03
VPREB1-202ENST00000403807 ERG28Q9UKR5 140 aa8.61□□□□□ -1.03
VPREB1-202ENST00000403807 FAT1Q14517 4588 aa8.61□□□□□ -1.03
VPREB1-202ENST00000403807 MYMXA0A1B0GTQ4 84 aa8.6□□□□□ -1.03
VPREB1-202ENST00000403807 RPL37AP61513 92 aaKnown RBP8.6□□□□□ -1.03
VPREB1-202ENST00000403807 SNRPEP62304 92 aaKnown RBP8.6□□□□□ -1.03
VPREB1-202ENST00000403807 HERV-K104P63124 156 aa8.6□□□□□ -1.03
VPREB1-202ENST00000403807 XAGE1AQ9HD64 81 aa8.6□□□□□ -1.03
VPREB1-202ENST00000403807 NDUFA12Q9UI09 145 aa8.6□□□□□ -1.03
VPREB1-202ENST00000403807 VPS13BQ7Z7G8 4022 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 FAM168BA1KXE4 195 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 LINC00587B1AMM8 73 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 J3QQQ9 107 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 AKR1D1P51857 326 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 HIST1H2BLQ99880 126 aa8.59□□□□□ -1.03
VPREB1-202ENST00000403807 LGALS3P17931 250 aaKnown RBP8.58□□□□□ -1.04
VPREB1-202ENST00000403807 NMUP48645 174 aa8.58□□□□□ -1.04
VPREB1-202ENST00000403807 LINC00158P58513 81 aa8.58□□□□□ -1.04
VPREB1-202ENST00000403807 FAM19A5Q7Z5A7 132 aaPredicted RBP8.58□□□□□ -1.04
VPREB1-202ENST00000403807 C5orf52A6NGY3 159 aa8.57□□□□□ -1.04
VPREB1-202ENST00000403807 E9PLD3 99 aa8.57□□□□□ -1.04
VPREB1-202ENST00000403807 MEIG1Q5JSS6 88 aa8.57□□□□□ -1.04
VPREB1-202ENST00000403807 PHF5AQ7RTV0 110 aaKnown RBP8.57□□□□□ -1.04
VPREB1-202ENST00000403807 INAFM2P0DMQ5 153 aa8.56□□□□□ -1.04
VPREB1-202ENST00000403807 TSPEAR-AS2P59090 65 aa8.56□□□□□ -1.04
VPREB1-202ENST00000403807 A0A0U1RRA0 63 aa8.55□□□□□ -1.04
VPREB1-202ENST00000403807 M0QXV9 152 aa8.55□□□□□ -1.04
VPREB1-202ENST00000403807 PLA2G2DQ9UNK4 145 aa8.55□□□□□ -1.04
VPREB1-202ENST00000403807 SMIM13P0DJ93 91 aa8.54□□□□□ -1.04
VPREB1-202ENST00000403807 KRTAP7-1Q8IUC3 87 aa8.54□□□□□ -1.04
VPREB1-202ENST00000403807 SND1-IT1Q9HBX3 110 aa8.54□□□□□ -1.04
VPREB1-202ENST00000403807 C22orf24Q9Y442 160 aa8.54□□□□□ -1.04
VPREB1-202ENST00000403807 KRTAP10-4P60372 401 aaPredicted RBP8.53□□□□□ -1.04
VPREB1-202ENST00000403807 LBHQ53QV2 105 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms