RNA–Protein interactions for RNA: ENST00000403073.1

PTCHD3P3-201, Transcript of patched domain containing 3 pseudogene 3, humanhuman

BASIC

Gene PTCHD3P3, Length 906 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P3-201ENST00000403073 C6orf48Q9UBA6 75 aa10.98□□□□□ -0.65
PTCHD3P3-201ENST00000403073 HERC2O95714 4834 aa10.98□□□□□ -0.65
PTCHD3P3-201ENST00000403073 IGKV2-24A0A0C4DH68 120 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 CKS1BP61024 79 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 ODF1Q14990 250 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 RNF151Q2KHN1 245 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 CIRBP-AS1Q8TBR5 109 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 DPH3Q96FX2 82 aa10.97□□□□□ -0.65
PTCHD3P3-201ENST00000403073 HSPG2P98160 4391 aa10.96□□□□□ -0.65
PTCHD3P3-201ENST00000403073 A0A096LNI7 61 aa10.96□□□□□ -0.65
PTCHD3P3-201ENST00000403073 SMR3BP02814 79 aaPredicted RBP10.96□□□□□ -0.65
PTCHD3P3-201ENST00000403073 COX7B2Q8TF08 81 aa10.96□□□□□ -0.65
PTCHD3P3-201ENST00000403073 MAP1LC3CQ9BXW4 147 aa10.96□□□□□ -0.65
PTCHD3P3-201ENST00000403073 LOC107984640A0A0U1RRK4 108 aa10.95□□□□□ -0.66
PTCHD3P3-201ENST00000403073 PMCHL2Q9BQD1 86 aa10.95□□□□□ -0.66
PTCHD3P3-201ENST00000403073 IGLV5-39A0A0G2JS06 123 aa10.94□□□□□ -0.66
PTCHD3P3-201ENST00000403073 GAGE2BQ13066 116 aa10.94□□□□□ -0.66
PTCHD3P3-201ENST00000403073 CIRBPQ14011 172 aaKnown RBP10.94□□□□□ -0.66
PTCHD3P3-201ENST00000403073 MAJINQ3KP22 176 aa10.94□□□□□ -0.66
PTCHD3P3-201ENST00000403073 SPACA4Q8TDM5 124 aa10.94□□□□□ -0.66
PTCHD3P3-201ENST00000403073 C9orf116Q5BN46 136 aaPredicted RBP10.93□□□□□ -0.66
PTCHD3P3-201ENST00000403073 PKIGQ9Y2B9 76 aa10.93□□□□□ -0.66
PTCHD3P3-201ENST00000403073 TRBV30A0A0K0K1B3 111 aa10.92□□□□□ -0.66
PTCHD3P3-201ENST00000403073 TMEM223A0PJW6 202 aa10.92□□□□□ -0.66
PTCHD3P3-201ENST00000403073 PTTG1IPP53801 180 aa10.92□□□□□ -0.66
PTCHD3P3-201ENST00000403073 RPL18AQ02543 176 aaKnown RBP10.92□□□□□ -0.66
PTCHD3P3-201ENST00000403073 A0A087WYN8 130 aa10.91□□□□□ -0.66
PTCHD3P3-201ENST00000403073 SYS1-DBNDD2H3BUS1 97 aa10.91□□□□□ -0.66
PTCHD3P3-201ENST00000403073 CXCL5P42830 114 aa10.9□□□□□ -0.66
PTCHD3P3-201ENST00000403073 Q6ZRP5 223 aa10.9□□□□□ -0.66
PTCHD3P3-201ENST00000403073 Q8N1X5 172 aa10.9□□□□□ -0.66
PTCHD3P3-201ENST00000403073 DPM2O94777 84 aa10.89□□□□□ -0.67
PTCHD3P3-201ENST00000403073 TLX1NBP0CAT3 122 aa10.89□□□□□ -0.67
PTCHD3P3-201ENST00000403073 PLNP26678 52 aa10.89□□□□□ -0.67
PTCHD3P3-201ENST00000403073 STPG4Q8N801 248 aa10.89□□□□□ -0.67
PTCHD3P3-201ENST00000403073 LINC00474Q9P2X8 69 aa10.89□□□□□ -0.67
PTCHD3P3-201ENST00000403073 IGKCP01834 107 aa10.88□□□□□ -0.67
PTCHD3P3-201ENST00000403073 C3orf79P0CE67 100 aa10.88□□□□□ -0.67
PTCHD3P3-201ENST00000403073 GAGE2EQ4V326 116 aa10.88□□□□□ -0.67
PTCHD3P3-201ENST00000403073 GAGE2DQ9UEU5 116 aa10.88□□□□□ -0.67
PTCHD3P3-201ENST00000403073 KRTDAPP60985 99 aa10.87□□□□□ -0.67
PTCHD3P3-201ENST00000403073 PET117Q6UWS5 81 aa10.87□□□□□ -0.67
PTCHD3P3-201ENST00000403073 KRTAP4-5Q9BYR2 181 aa10.87□□□□□ -0.67
PTCHD3P3-201ENST00000403073 PLAC8Q9NZF1 115 aa10.87□□□□□ -0.67
PTCHD3P3-201ENST00000403073 NDUFC2-KCTD14E9PQ53 114 aa10.86□□□□□ -0.67
PTCHD3P3-201ENST00000403073 S100A6P06703 90 aa10.86□□□□□ -0.67
PTCHD3P3-201ENST00000403073 HIST3H2BBQ8N257 126 aa10.86□□□□□ -0.67
PTCHD3P3-201ENST00000403073 LINC01545Q5VT33 79 aa10.85□□□□□ -0.67
PTCHD3P3-201ENST00000403073 LINC00528Q8N1L1 170 aa10.85□□□□□ -0.67
PTCHD3P3-201ENST00000403073 A0A1W2PNN7 141 aa10.84□□□□□ -0.67
PTCHD3P3-201ENST00000403073 Q5VSD8 79 aa10.84□□□□□ -0.67
PTCHD3P3-201ENST00000403073 ZNF625Q96I27 306 aaPredicted RBP10.84□□□□□ -0.67
PTCHD3P3-201ENST00000403073 EPM2AB3EWF7 344 aa10.83□□□□□ -0.68
PTCHD3P3-201ENST00000403073 FAM229AH3BQW9 127 aa10.83□□□□□ -0.68
PTCHD3P3-201ENST00000403073 S100A2P29034 98 aa10.83□□□□□ -0.68
PTCHD3P3-201ENST00000403073 SNRPEP62304 92 aaKnown RBP10.83□□□□□ -0.68
PTCHD3P3-201ENST00000403073 HIST1H2BLQ99880 126 aa10.82□□□□□ -0.68
PTCHD3P3-201ENST00000403073 FAT1Q14517 4588 aa10.82□□□□□ -0.68
PTCHD3P3-201ENST00000403073 FAM168BA1KXE4 195 aa10.81□□□□□ -0.68
PTCHD3P3-201ENST00000403073 LEPROTO15243 131 aa10.81□□□□□ -0.68
PTCHD3P3-201ENST00000403073 C9orf129Q5T035 196 aaKnown RBP10.81□□□□□ -0.68
PTCHD3P3-201ENST00000403073 XAGE1AQ9HD64 81 aa10.81□□□□□ -0.68
PTCHD3P3-201ENST00000403073 PFN2P35080 140 aa10.8□□□□□ -0.68
PTCHD3P3-201ENST00000403073 TSPEAR-AS2P59090 65 aa10.8□□□□□ -0.68
PTCHD3P3-201ENST00000403073 HERVK_113P61574 105 aa10.8□□□□□ -0.68
PTCHD3P3-201ENST00000403073 PLEKHB2Q96CS7 222 aa10.79□□□□□ -0.68
PTCHD3P3-201ENST00000403073 ERG28Q9UKR5 140 aa10.79□□□□□ -0.68
PTCHD3P3-201ENST00000403073 C5orf52A6NGY3 159 aa10.78□□□□□ -0.68
PTCHD3P3-201ENST00000403073 SFTA2Q6UW10 78 aa10.78□□□□□ -0.68
PTCHD3P3-201ENST00000403073 KRTAP7-1Q8IUC3 87 aa10.78□□□□□ -0.68
PTCHD3P3-201ENST00000403073 NDUFA12Q9UI09 145 aa10.78□□□□□ -0.68
PTCHD3P3-201ENST00000403073 C20orf202A1L168 122 aa10.77□□□□□ -0.69
PTCHD3P3-201ENST00000403073 J3QQQ9 107 aa10.77□□□□□ -0.69
PTCHD3P3-201ENST00000403073 FAM19A5Q7Z5A7 132 aaPredicted RBP10.77□□□□□ -0.69
PTCHD3P3-201ENST00000403073 A0A0U1RRA0 63 aa10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 MYMXA0A1B0GTQ4 84 aa10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 E9PLD3 99 aa10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 PLA2G1BP04054 148 aaKnown RBP10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 LGALS3P17931 250 aaKnown RBP10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 RPL37AP61513 92 aaKnown RBP10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 PHF5AQ7RTV0 110 aaKnown RBP10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 C7orf33Q8WU49 177 aa10.75□□□□□ -0.69
PTCHD3P3-201ENST00000403073 LINC00158P58513 81 aa10.74□□□□□ -0.69
PTCHD3P3-201ENST00000403073 COX17Q14061 63 aa10.74□□□□□ -0.69
PTCHD3P3-201ENST00000403073 SERTAD4-AS1Q5TG53 156 aa10.74□□□□□ -0.69
PTCHD3P3-201ENST00000403073 ATOH7Q8N100 152 aa10.74□□□□□ -0.69
PTCHD3P3-201ENST00000403073 SMIM13P0DJ93 91 aa10.73□□□□□ -0.69
PTCHD3P3-201ENST00000403073 KRTAP10-4P60372 401 aaPredicted RBP10.73□□□□□ -0.69
PTCHD3P3-201ENST00000403073 HERV-K104P63124 156 aa10.73□□□□□ -0.69
PTCHD3P3-201ENST00000403073 MEIG1Q5JSS6 88 aa10.72□□□□□ -0.69
PTCHD3P3-201ENST00000403073 SND1-IT1Q9HBX3 110 aa10.72□□□□□ -0.69
PTCHD3P3-201ENST00000403073 ABCA13Q86UQ4 5058 aa10.71□□□□□ -0.69
PTCHD3P3-201ENST00000403073 IGKV2D-26A0A0A0MRZ7 120 aa10.7□□□□□ -0.7
PTCHD3P3-201ENST00000403073 M0QXV9 152 aa10.7□□□□□ -0.7
PTCHD3P3-201ENST00000403073 NMUP48645 174 aa10.7□□□□□ -0.7
PTCHD3P3-201ENST00000403073 C22orf24Q9Y442 160 aa10.7□□□□□ -0.7
PTCHD3P3-201ENST00000403073 VPS13BQ7Z7G8 4022 aa10.69□□□□□ -0.7
PTCHD3P3-201ENST00000403073 INAFM2P0DMQ5 153 aa10.68□□□□□ -0.7
PTCHD3P3-201ENST00000403073 ANKRD39Q53RE8 183 aa10.68□□□□□ -0.7
PTCHD3P3-201ENST00000403073 KRTAP11-1Q8IUC1 163 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms