RNA–Protein interactions for RNA: ENST00000399627.3

SBF1-203, Transcript of SET binding factor 1, humanhuman

TSL 5

Gene SBF1, Length 811 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBF1-203ENST00000399627 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 CIRBPQ14011 172 aaKnown RBP11.58□□□□□ -0.56
SBF1-203ENST00000399627 RNF151Q2KHN1 245 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 C6orf226Q5I0X4 101 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 C6orf48Q9UBA6 75 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 HSPB8Q9UJY1 196 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 PKIGQ9Y2B9 76 aa11.58□□□□□ -0.56
SBF1-203ENST00000399627 LOC107984640A0A0U1RRK4 108 aa11.57□□□□□ -0.56
SBF1-203ENST00000399627 H0Y8G0 127 aa11.57□□□□□ -0.56
SBF1-203ENST00000399627 Q8N1X5 172 aa11.57□□□□□ -0.56
SBF1-203ENST00000399627 SPACA4Q8TDM5 124 aa11.57□□□□□ -0.56
SBF1-203ENST00000399627 F8VRH5 84 aa11.56□□□□□ -0.56
SBF1-203ENST00000399627 CKS1BP61024 79 aa11.56□□□□□ -0.56
SBF1-203ENST00000399627 COA6Q5JTJ3 125 aaKnown RBP11.56□□□□□ -0.56
SBF1-203ENST00000399627 COX7B2Q8TF08 81 aa11.56□□□□□ -0.56
SBF1-203ENST00000399627 DPH3Q96FX2 82 aa11.56□□□□□ -0.56
SBF1-203ENST00000399627 GAGE2BQ13066 116 aa11.55□□□□□ -0.56
SBF1-203ENST00000399627 MAJINQ3KP22 176 aa11.55□□□□□ -0.56
SBF1-203ENST00000399627 TMEM170BQ5T4T1 132 aa11.55□□□□□ -0.56
SBF1-203ENST00000399627 TRBV30A0A0K0K1B3 111 aa11.54□□□□□ -0.56
SBF1-203ENST00000399627 ODF1Q14990 250 aa11.54□□□□□ -0.56
SBF1-203ENST00000399627 A0A087WYN8 130 aa11.53□□□□□ -0.56
SBF1-203ENST00000399627 IGLV5-39A0A0G2JS06 123 aa11.53□□□□□ -0.56
SBF1-203ENST00000399627 PTTG1IPP53801 180 aa11.53□□□□□ -0.56
SBF1-203ENST00000399627 RPL18AQ02543 176 aaKnown RBP11.53□□□□□ -0.56
SBF1-203ENST00000399627 CXCL5P42830 114 aa11.52□□□□□ -0.57
SBF1-203ENST00000399627 C9orf116Q5BN46 136 aaPredicted RBP11.52□□□□□ -0.57
SBF1-203ENST00000399627 KRTAP4-5Q9BYR2 181 aa11.52□□□□□ -0.57
SBF1-203ENST00000399627 MAP1LC3CQ9BXW4 147 aa11.51□□□□□ -0.57
SBF1-203ENST00000399627 LINC00474Q9P2X8 69 aa11.51□□□□□ -0.57
SBF1-203ENST00000399627 TLX1NBP0CAT3 122 aa11.5□□□□□ -0.57
SBF1-203ENST00000399627 LINC00528Q8N1L1 170 aa11.5□□□□□ -0.57
SBF1-203ENST00000399627 STPG4Q8N801 248 aa11.5□□□□□ -0.57
SBF1-203ENST00000399627 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
SBF1-203ENST00000399627 TMEM223A0PJW6 202 aa11.49□□□□□ -0.57
SBF1-203ENST00000399627 EPM2AB3EWF7 344 aa11.49□□□□□ -0.57
SBF1-203ENST00000399627 Q5VSD8 79 aa11.49□□□□□ -0.57
SBF1-203ENST00000399627 Q6ZRP5 223 aa11.49□□□□□ -0.57
SBF1-203ENST00000399627 PMCHL2Q9BQD1 86 aa11.49□□□□□ -0.57
SBF1-203ENST00000399627 FAM229AH3BQW9 127 aa11.47□□□□□ -0.57
SBF1-203ENST00000399627 GAGE2EQ4V326 116 aa11.47□□□□□ -0.57
SBF1-203ENST00000399627 GAGE2DQ9UEU5 116 aa11.47□□□□□ -0.57
SBF1-203ENST00000399627 FAT1Q14517 4588 aa11.46□□□□□ -0.57
SBF1-203ENST00000399627 NDUFC2-KCTD14E9PQ53 114 aa11.46□□□□□ -0.57
SBF1-203ENST00000399627 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.57
SBF1-203ENST00000399627 DPM2O94777 84 aa11.46□□□□□ -0.57
SBF1-203ENST00000399627 PLNP26678 52 aa11.45□□□□□ -0.58
SBF1-203ENST00000399627 A0A1W2PNN7 141 aa11.44□□□□□ -0.58
SBF1-203ENST00000399627 IGKCP01834 107 aa11.44□□□□□ -0.58
SBF1-203ENST00000399627 C3orf79P0CE67 100 aa11.42□□□□□ -0.58
SBF1-203ENST00000399627 PET117Q6UWS5 81 aa11.42□□□□□ -0.58
SBF1-203ENST00000399627 FAM168BA1KXE4 195 aa11.4□□□□□ -0.58
SBF1-203ENST00000399627 PLA2G1BP04054 148 aaKnown RBP11.4□□□□□ -0.58
SBF1-203ENST00000399627 KRTDAPP60985 99 aa11.4□□□□□ -0.58
SBF1-203ENST00000399627 C9orf129Q5T035 196 aaKnown RBP11.4□□□□□ -0.58
SBF1-203ENST00000399627 LINC01545Q5VT33 79 aa11.4□□□□□ -0.58
SBF1-203ENST00000399627 ZNF625Q96I27 306 aaPredicted RBP11.4□□□□□ -0.58
SBF1-203ENST00000399627 S100A6P06703 90 aa11.39□□□□□ -0.59
SBF1-203ENST00000399627 HIST3H2BBQ8N257 126 aa11.39□□□□□ -0.59
SBF1-203ENST00000399627 VPS13BQ7Z7G8 4022 aa11.38□□□□□ -0.59
SBF1-203ENST00000399627 RPL37AP61513 92 aaKnown RBP11.38□□□□□ -0.59
SBF1-203ENST00000399627 HERVK_113P61574 105 aa11.38□□□□□ -0.59
SBF1-203ENST00000399627 C7orf33Q8WU49 177 aa11.38□□□□□ -0.59
SBF1-203ENST00000399627 XAGE1AQ9HD64 81 aa11.38□□□□□ -0.59
SBF1-203ENST00000399627 LEPROTO15243 131 aa11.37□□□□□ -0.59
SBF1-203ENST00000399627 PFN2P35080 140 aa11.37□□□□□ -0.59
SBF1-203ENST00000399627 SFTA2Q6UW10 78 aa11.37□□□□□ -0.59
SBF1-203ENST00000399627 ERG28Q9UKR5 140 aa11.37□□□□□ -0.59
SBF1-203ENST00000399627 TSPEAR-AS2P59090 65 aa11.36□□□□□ -0.59
SBF1-203ENST00000399627 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
SBF1-203ENST00000399627 FAM19A5Q7Z5A7 132 aaPredicted RBP11.36□□□□□ -0.59
SBF1-203ENST00000399627 PLEKHB2Q96CS7 222 aa11.36□□□□□ -0.59
SBF1-203ENST00000399627 ABCA13Q86UQ4 5058 aa11.36□□□□□ -0.59
SBF1-203ENST00000399627 S100A2P29034 98 aa11.35□□□□□ -0.59
SBF1-203ENST00000399627 KRTAP7-1Q8IUC3 87 aa11.35□□□□□ -0.59
SBF1-203ENST00000399627 HIST1H2BLQ99880 126 aa11.35□□□□□ -0.59
SBF1-203ENST00000399627 NDUFA12Q9UI09 145 aa11.35□□□□□ -0.59
SBF1-203ENST00000399627 SRRM2Q9UQ35 2752 aaKnown RBP11.34□□□□□ -0.59
SBF1-203ENST00000399627 SNRPEP62304 92 aaKnown RBP11.34□□□□□ -0.59
SBF1-203ENST00000399627 PHF5AQ7RTV0 110 aaKnown RBP11.34□□□□□ -0.59
SBF1-203ENST00000399627 J3QQQ9 107 aa11.33□□□□□ -0.6
SBF1-203ENST00000399627 FLG2Q5D862 2391 aaPredicted RBP11.33□□□□□ -0.6
SBF1-203ENST00000399627 MYMXA0A1B0GTQ4 84 aa11.32□□□□□ -0.6
SBF1-203ENST00000399627 C20orf202A1L168 122 aa11.32□□□□□ -0.6
SBF1-203ENST00000399627 INAFM2P0DMQ5 153 aa11.32□□□□□ -0.6
SBF1-203ENST00000399627 COX17Q14061 63 aa11.32□□□□□ -0.6
SBF1-203ENST00000399627 SERTAD4-AS1Q5TG53 156 aa11.32□□□□□ -0.6
SBF1-203ENST00000399627 E9PLD3 99 aa11.31□□□□□ -0.6
SBF1-203ENST00000399627 LGALS3P17931 250 aaKnown RBP11.31□□□□□ -0.6
SBF1-203ENST00000399627 HERV-K104P63124 156 aa11.31□□□□□ -0.6
SBF1-203ENST00000399627 A0A0U1RRA0 63 aa11.3□□□□□ -0.6
SBF1-203ENST00000399627 M0QXV9 152 aa11.3□□□□□ -0.6
SBF1-203ENST00000399627 LINC00158P58513 81 aa11.3□□□□□ -0.6
SBF1-203ENST00000399627 MEIG1Q5JSS6 88 aa11.3□□□□□ -0.6
SBF1-203ENST00000399627 C5orf52A6NGY3 159 aa11.29□□□□□ -0.6
SBF1-203ENST00000399627 SMIM13P0DJ93 91 aa11.29□□□□□ -0.6
SBF1-203ENST00000399627 SND1-IT1Q9HBX3 110 aa11.29□□□□□ -0.6
SBF1-203ENST00000399627 NMUP48645 174 aa11.28□□□□□ -0.6
SBF1-203ENST00000399627 PRR3P79522 188 aaKnown RBP11.28□□□□□ -0.6
SBF1-203ENST00000399627 ATOH7Q8N100 152 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms