RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 IGKV2-30P06310 120 aa5.18□□□□□ -1.58
UPF2-203ENST00000397053 PLA2G1BP04054 148 aaKnown RBP5.17□□□□□ -1.58
UPF2-203ENST00000397053 XGP55808 180 aa5.17□□□□□ -1.58
UPF2-203ENST00000397053 SPACA4Q8TDM5 124 aa5.17□□□□□ -1.58
UPF2-203ENST00000397053 TP73-AS1Q9UF72 201 aa5.17□□□□□ -1.58
UPF2-203ENST00000397053 TMEM131Q92545 1883 aa5.17□□□□□ -1.58
UPF2-203ENST00000397053 ANAPC1Q9H1A4 1944 aa5.17□□□□□ -1.58
UPF2-203ENST00000397053 NRACQ8N912 160 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 IGLV4-60A0A075B6I1 120 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 SBSPONQ8IVN8 264 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 C11orf1Q9H5F2 150 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 MDFIQ99750 246 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 MGAMO43451 1857 aa5.16□□□□□ -1.58
UPF2-203ENST00000397053 PLXNA2O75051 1894 aa5.15□□□□□ -1.58
UPF2-203ENST00000397053 PRLHP81277 87 aa5.15□□□□□ -1.58
UPF2-203ENST00000397053 HECTD1Q9ULT8 2610 aa5.15□□□□□ -1.58
UPF2-203ENST00000397053 FHL2Q14192 279 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 IMUPQ9GZP8 106 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 C16orf95Q9H693 158 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 F8WDY8 70 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 PRR3P79522 188 aaKnown RBP5.15□□□□□ -1.59
UPF2-203ENST00000397053 FHL3Q13643 280 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 LYPD5Q6UWN5 251 aa5.15□□□□□ -1.59
UPF2-203ENST00000397053 C16orf90A8MZG2 172 aa5.14□□□□□ -1.59
UPF2-203ENST00000397053 SMIM1B2RUZ4 78 aa5.14□□□□□ -1.59
UPF2-203ENST00000397053 DEFB116Q30KQ4 102 aa5.14□□□□□ -1.59
UPF2-203ENST00000397053 Q8N814 137 aa5.14□□□□□ -1.59
UPF2-203ENST00000397053 Q6ZPA2 131 aa5.13□□□□□ -1.59
UPF2-203ENST00000397053 EDN2P20800 178 aa5.13□□□□□ -1.59
UPF2-203ENST00000397053 LINC00575Q6W349 94 aa5.13□□□□□ -1.59
UPF2-203ENST00000397053 KIAA1549Q9HCM3 1950 aa5.13□□□□□ -1.59
UPF2-203ENST00000397053 EIF4EBP1Q13541 118 aaPredicted RBP5.13□□□□□ -1.59
UPF2-203ENST00000397053 SIP14410 1827 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 ZNF295-AS1Q8N0V1 137 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 FLG2Q5D862 2391 aaPredicted RBP5.12□□□□□ -1.59
UPF2-203ENST00000397053 NUP210Q8TEM1 1887 aaPredicted RBP5.12□□□□□ -1.59
UPF2-203ENST00000397053 TANC1Q9C0D5 1861 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 H0Y9P7 68 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 SMCR5Q8TEV8 140 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 COX7CP15954 63 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 BEAN1Q3B7T3 259 aa5.12□□□□□ -1.59
UPF2-203ENST00000397053 LINC00694P0DN24 101 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 COX6B2Q6YFQ2 88 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 Q6ZRU5 148 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 STAB1Q9NY15 2570 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 TRBV7-7A0A0K0K1E9 115 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 DENND4CQ5VZ89 1909 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 TRAV7A0A075B6U4 112 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 CRIP2P52943 208 aaPredicted RBP5.11□□□□□ -1.59
UPF2-203ENST00000397053 PMAIP1Q13794 54 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 NLRC5Q86WI3 1866 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 SMIM26A0A096LP01 95 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 A0A1B0GUV1 79 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 CRYGAP11844 174 aa5.11□□□□□ -1.59
UPF2-203ENST00000397053 IGIPA6NJ69 53 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 SOSTDC1Q6X4U4 206 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 Q8N3U1 123 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 GAS8-AS1O95177 125 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 C22orf24Q9Y442 160 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 EXPH5Q8NEV8 1989 aa5.1□□□□□ -1.59
UPF2-203ENST00000397053 CSDC2Q9Y534 153 aaKnown RBP5.1□□□□□ -1.59
UPF2-203ENST00000397053 PCDH15Q96QU1 1955 aa5.09□□□□□ -1.59
UPF2-203ENST00000397053 MOBPQ13875 183 aa5.09□□□□□ -1.59
UPF2-203ENST00000397053 TET2Q6N021 2002 aaPredicted RBP5.09□□□□□ -1.59
UPF2-203ENST00000397053 A0A1W2PPR1 153 aa5.09□□□□□ -1.59
UPF2-203ENST00000397053 C7orf65Q6ZTY9 151 aa5.09□□□□□ -1.59
UPF2-203ENST00000397053 C2orf16Q68DN1 1984 aa5.08□□□□□ -1.6
UPF2-203ENST00000397053 WWC2-AS2Q96NR7 200 aa5.08□□□□□ -1.6
UPF2-203ENST00000397053 CNFNQ9BYD5 112 aa5.08□□□□□ -1.6
UPF2-203ENST00000397053 TYMSOSQ8TAI1 123 aa5.08□□□□□ -1.6
UPF2-203ENST00000397053 PLXNB3Q9ULL4 1909 aa5.08□□□□□ -1.6
UPF2-203ENST00000397053 A0A087WVE0 104 aa5.07□□□□□ -1.6
UPF2-203ENST00000397053 OBSL1O75147 1896 aa5.07□□□□□ -1.6
UPF2-203ENST00000397053 WDR87Q6ZQQ6 2873 aa5.07□□□□□ -1.6
UPF2-203ENST00000397053 C1orf195Q5TG92 126 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 ZNF580Q9UK33 172 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 A0A087WYN8 130 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 A8MTW9 85 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 ATP11AUNQ6ZP68 121 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 C1orf64Q8NEQ6 169 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 KIF25-AS1Q9Y6Z4 181 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 KIF26AQ9ULI4 1882 aaPredicted RBP5.06□□□□□ -1.6
UPF2-203ENST00000397053 CRIP3Q6Q6R5 217 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 Q6ZRP5 223 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 HCFC1P51610 2035 aa5.06□□□□□ -1.6
UPF2-203ENST00000397053 PSPHP1O15172 72 aa5.05□□□□□ -1.6
UPF2-203ENST00000397053 ALPK3Q96L96 1907 aa5.05□□□□□ -1.6
UPF2-203ENST00000397053 ACYP2P14621 99 aa5.05□□□□□ -1.6
UPF2-203ENST00000397053 KRTAP24-1Q3LI83 254 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 LINC00315P59091 139 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 A0A1B0GU69 56 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 RTL8CO15255 209 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 LINC01561Q8N1V8 128 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 LINC00167Q96N53 147 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 CDIP1Q9H305 208 aa5.04□□□□□ -1.6
UPF2-203ENST00000397053 C2orf91Q6ZV80 131 aa5.03□□□□□ -1.6
UPF2-203ENST00000397053 NBDYA0A0U1RRE5 68 aa5.03□□□□□ -1.6
UPF2-203ENST00000397053 AMELXQ99217 191 aa5.03□□□□□ -1.6
UPF2-203ENST00000397053 PCNX3Q9H6A9 2034 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms