RNA–Protein interactions for RNA: ENST00000396653.2

AP1S3-202, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 4 BASIC

Gene AP1S3, Length 589 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-202ENST00000396653 TRBV30A0A0K0K1B3 111 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 C5orf52A6NGY3 159 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 IGKCP01834 107 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 Q6ZSA8 131 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 HIST1H2BLQ99880 126 aa10.57□□□□□ -0.72
AP1S3-202ENST00000396653 KRTDAPP60985 99 aa10.56□□□□□ -0.72
AP1S3-202ENST00000396653 CKS1BP61024 79 aa10.56□□□□□ -0.72
AP1S3-202ENST00000396653 SNRPEP62304 92 aaKnown RBP10.56□□□□□ -0.72
AP1S3-202ENST00000396653 CDK2AP2O75956 126 aa10.55□□□□□ -0.72
AP1S3-202ENST00000396653 C2orf82Q6UX34 121 aa10.55□□□□□ -0.72
AP1S3-202ENST00000396653 UNQ6190/PRO20217Q6UXQ8 127 aa10.55□□□□□ -0.72
AP1S3-202ENST00000396653 PMCHL2Q9BQD1 86 aa10.55□□□□□ -0.72
AP1S3-202ENST00000396653 C6orf48Q9UBA6 75 aa10.55□□□□□ -0.72
AP1S3-202ENST00000396653 C20orf202A1L168 122 aa10.54□□□□□ -0.72
AP1S3-202ENST00000396653 C10orf25Q5T742 122 aa10.54□□□□□ -0.72
AP1S3-202ENST00000396653 LOC107984640A0A0U1RRK4 108 aa10.53□□□□□ -0.72
AP1S3-202ENST00000396653 TLX1NBP0CAT3 122 aa10.53□□□□□ -0.72
AP1S3-202ENST00000396653 AKR1D1P51857 326 aa10.53□□□□□ -0.72
AP1S3-202ENST00000396653 HERVK_113P61574 105 aa10.53□□□□□ -0.72
AP1S3-202ENST00000396653 SFTA2Q6UW10 78 aa10.53□□□□□ -0.72
AP1S3-202ENST00000396653 CIRBPQ14011 172 aaKnown RBP10.52□□□□□ -0.73
AP1S3-202ENST00000396653 FAM30AQ9NZY2 134 aa10.52□□□□□ -0.73
AP1S3-202ENST00000396653 APOBP04114 4563 aaKnown RBP10.5□□□□□ -0.73
AP1S3-202ENST00000396653 LINC00474Q9P2X8 69 aa10.5□□□□□ -0.73
AP1S3-202ENST00000396653 A0A096LNI7 61 aa10.49□□□□□ -0.73
AP1S3-202ENST00000396653 SPACA4Q8TDM5 124 aa10.49□□□□□ -0.73
AP1S3-202ENST00000396653 PLEKHB2Q96CS7 222 aa10.49□□□□□ -0.73
AP1S3-202ENST00000396653 LEPROTO15243 131 aa10.48□□□□□ -0.73
AP1S3-202ENST00000396653 PTTG1IPP53801 180 aa10.48□□□□□ -0.73
AP1S3-202ENST00000396653 XGP55808 180 aa10.48□□□□□ -0.73
AP1S3-202ENST00000396653 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.48□□□□□ -0.73
AP1S3-202ENST00000396653 E9PLD3 99 aa10.47□□□□□ -0.73
AP1S3-202ENST00000396653 NDUFC2-KCTD14E9PQ53 114 aa10.47□□□□□ -0.73
AP1S3-202ENST00000396653 RPL18AQ02543 176 aaKnown RBP10.47□□□□□ -0.73
AP1S3-202ENST00000396653 ZNF625Q96I27 306 aaPredicted RBP10.47□□□□□ -0.73
AP1S3-202ENST00000396653 PANO1I0J062 215 aa10.46□□□□□ -0.73
AP1S3-202ENST00000396653 CHTF8P0CG12 524 aa10.46□□□□□ -0.73
AP1S3-202ENST00000396653 SCXQ7RTU7 201 aa10.46□□□□□ -0.73
AP1S3-202ENST00000396653 IGKV2-24A0A0C4DH68 120 aa10.45□□□□□ -0.74
AP1S3-202ENST00000396653 GAGE2BQ13066 116 aa10.45□□□□□ -0.74
AP1S3-202ENST00000396653 C9orf116Q5BN46 136 aaPredicted RBP10.45□□□□□ -0.74
AP1S3-202ENST00000396653 Q6ZRP5 223 aa10.45□□□□□ -0.74
AP1S3-202ENST00000396653 J3QQQ9 107 aa10.44□□□□□ -0.74
AP1S3-202ENST00000396653 NMUP48645 174 aa10.44□□□□□ -0.74
AP1S3-202ENST00000396653 TSPEAR-AS2P59090 65 aa10.44□□□□□ -0.74
AP1S3-202ENST00000396653 HERV-K104P63124 156 aa10.44□□□□□ -0.74
AP1S3-202ENST00000396653 NDUFA12Q9UI09 145 aa10.44□□□□□ -0.74
AP1S3-202ENST00000396653 TMA7Q9Y2S6 64 aaKnown RBP10.44□□□□□ -0.74
AP1S3-202ENST00000396653 COX17Q14061 63 aa10.43□□□□□ -0.74
AP1S3-202ENST00000396653 MAJINQ3KP22 176 aa10.43□□□□□ -0.74
AP1S3-202ENST00000396653 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
AP1S3-202ENST00000396653 PLAC8Q9NZF1 115 aa10.43□□□□□ -0.74
AP1S3-202ENST00000396653 A0A087WYN8 130 aa10.42□□□□□ -0.74
AP1S3-202ENST00000396653 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
AP1S3-202ENST00000396653 LGALS3P17931 250 aaKnown RBP10.42□□□□□ -0.74
AP1S3-202ENST00000396653 ERG28Q9UKR5 140 aa10.42□□□□□ -0.74
AP1S3-202ENST00000396653 RYR1P21817 5038 aa10.42□□□□□ -0.74
AP1S3-202ENST00000396653 STPG4Q8N801 248 aa10.41□□□□□ -0.74
AP1S3-202ENST00000396653 EPM2AB3EWF7 344 aa10.4□□□□□ -0.74
AP1S3-202ENST00000396653 HAMPP81172 84 aa10.4□□□□□ -0.74
AP1S3-202ENST00000396653 GAGE2EQ4V326 116 aa10.4□□□□□ -0.74
AP1S3-202ENST00000396653 GAGE2DQ9UEU5 116 aa10.4□□□□□ -0.74
AP1S3-202ENST00000396653 HSPG2P98160 4391 aa10.4□□□□□ -0.74
AP1S3-202ENST00000396653 KIAA1109Q2LD37 5005 aa10.39□□□□□ -0.75
AP1S3-202ENST00000396653 LINC00587B1AMM8 73 aa10.39□□□□□ -0.75
AP1S3-202ENST00000396653 ATOH7Q8N100 152 aa10.39□□□□□ -0.75
AP1S3-202ENST00000396653 DPH3Q96FX2 82 aa10.39□□□□□ -0.75
AP1S3-202ENST00000396653 SCGB1D1O95968 90 aa10.37□□□□□ -0.75
AP1S3-202ENST00000396653 PFN2P35080 140 aa10.37□□□□□ -0.75
AP1S3-202ENST00000396653 MEIG1Q5JSS6 88 aa10.37□□□□□ -0.75
AP1S3-202ENST00000396653 C9orf129Q5T035 196 aaKnown RBP10.37□□□□□ -0.75
AP1S3-202ENST00000396653 IGKV2D-26A0A0A0MRZ7 120 aa10.36□□□□□ -0.75
AP1S3-202ENST00000396653 ANKRD39Q53RE8 183 aa10.36□□□□□ -0.75
AP1S3-202ENST00000396653 A0A1W2PNN7 141 aa10.35□□□□□ -0.75
AP1S3-202ENST00000396653 HSBP1L1C9JCN9 74 aa10.35□□□□□ -0.75
AP1S3-202ENST00000396653 XAGE1AQ9HD64 81 aa10.35□□□□□ -0.75
AP1S3-202ENST00000396653 LINC00158P58513 81 aa10.34□□□□□ -0.75
AP1S3-202ENST00000396653 JOSD1Q15040 202 aaPredicted RBP10.34□□□□□ -0.75
AP1S3-202ENST00000396653 SMIM13P0DJ93 91 aa10.33□□□□□ -0.76
AP1S3-202ENST00000396653 Q8N1X5 172 aa10.33□□□□□ -0.76
AP1S3-202ENST00000396653 SND1-IT1Q9HBX3 110 aa10.33□□□□□ -0.76
AP1S3-202ENST00000396653 PLA2G2DQ9UNK4 145 aa10.33□□□□□ -0.76
AP1S3-202ENST00000396653 A0A0J9YXY3 114 aa10.32□□□□□ -0.76
AP1S3-202ENST00000396653 ZNF815PA8K554 130 aa10.32□□□□□ -0.76
AP1S3-202ENST00000396653 FAM168BA1KXE4 195 aa10.31□□□□□ -0.76
AP1S3-202ENST00000396653 SMR3BP02814 79 aaPredicted RBP10.31□□□□□ -0.76
AP1S3-202ENST00000396653 FAM19A5Q7Z5A7 132 aaPredicted RBP10.31□□□□□ -0.76
AP1S3-202ENST00000396653 LINC00528Q8N1L1 170 aa10.31□□□□□ -0.76
AP1S3-202ENST00000396653 HERC2O95714 4834 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 A0A0U1RRA0 63 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 TIMM17BO60830 172 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 MIR7-3HGQ8N6C7 128 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 C7orf33Q8WU49 177 aa10.3□□□□□ -0.76
AP1S3-202ENST00000396653 IGLV5-37A0A075B6J1 123 aa10.29□□□□□ -0.76
AP1S3-202ENST00000396653 SERTAD4-AS1Q5TG53 156 aa10.29□□□□□ -0.76
AP1S3-202ENST00000396653 TTTY13Q9BZ97 58 aa10.29□□□□□ -0.76
AP1S3-202ENST00000396653 TP73-AS1Q9UF72 201 aa10.29□□□□□ -0.76
AP1S3-202ENST00000396653 FAM229AH3BQW9 127 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 248.9 ms