RNA–Protein interactions for RNA: ENST00000396610.6

CMC1-202, Transcript of C-X9-C motif containing 1, humanhuman

TSL 2

Gene CMC1, Length 593 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-202ENST00000396610 Q0VG73 95 aa-0.94□□□□□ -2.56
CMC1-202ENST00000396610 SFTA2Q6UW10 78 aa-0.94□□□□□ -2.56
CMC1-202ENST00000396610 MYH7P12883 1935 aa-0.94□□□□□ -2.56
CMC1-202ENST00000396610 FOCADQ5VW36 1801 aa-0.94□□□□□ -2.56
CMC1-202ENST00000396610 HMGXB3Q12766 1538 aa-0.94□□□□□ -2.56
CMC1-202ENST00000396610 RYR3Q15413 4870 aa-0.95□□□□□ -2.56
CMC1-202ENST00000396610 COX6CP09669 75 aa-0.95□□□□□ -2.56
CMC1-202ENST00000396610 KRTAP6-2Q3LI66 62 aa-0.95□□□□□ -2.56
CMC1-202ENST00000396610 LCN9Q8WX39 176 aa-0.95□□□□□ -2.56
CMC1-202ENST00000396610 APLNQ9ULZ1 77 aa-0.95□□□□□ -2.56
CMC1-202ENST00000396610 EPPK1P58107 5090 aaKnown RBP-0.95□□□□□ -2.56
CMC1-202ENST00000396610 IER3IP1Q9Y5U9 82 aa-0.96□□□□□ -2.56
CMC1-202ENST00000396610 NBASA2RRP1 2371 aa-0.96□□□□□ -2.56
CMC1-202ENST00000396610 IQSEC2Q5JU85 1478 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 CPSF4LA6NMK7 179 aaKnown RBP-0.97□□□□□ -2.56
CMC1-202ENST00000396610 UBE2D3P61077 147 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 UBE2D2P62837 147 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 RPL13AP3Q6NVV1 102 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 PRO1854Q9UHT4 67 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 BTAF1O14981 1849 aa-0.97□□□□□ -2.56
CMC1-202ENST00000396610 TET3O43151 1660 aa-0.97□□□□□ -2.57
CMC1-202ENST00000396610 FAM223BA6NKX1 122 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 SPRR2EP22531 72 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 SPRR2AP35326 72 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 SVBPQ8N300 66 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 C12orf57Q99622 126 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 KDM5AP29375 1690 aaKnown RBP-0.98□□□□□ -2.57
CMC1-202ENST00000396610 SCAPERQ9BY12 1400 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 RYR1P21817 5038 aa-0.98□□□□□ -2.57
CMC1-202ENST00000396610 SPTBN4Q9H254 2564 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 ARHGEF5Q12774 1597 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 ROBO1Q9Y6N7 1651 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 NAP1L6A6NFF2 107 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 SEC11AP67812 179 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 PRRC2CQ9Y520 2896 aaKnown RBP-0.99□□□□□ -2.57
CMC1-202ENST00000396610 C1orf167Q5SNV9 1468 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 EHBP1L1Q8N3D4 1523 aa-0.99□□□□□ -2.57
CMC1-202ENST00000396610 DNAH3Q8TD57 4116 aa-1□□□□□ -2.57
CMC1-202ENST00000396610 KIAA1109Q2LD37 5005 aa-1□□□□□ -2.57
CMC1-202ENST00000396610 LINC00846Q9NV44 126 aa-1□□□□□ -2.57
CMC1-202ENST00000396610 BIRC6Q9NR09 4857 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 HTTP42858 3142 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 MUC17Q685J3 4493 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 SAA2P0DJI9 122 aaPredicted RBP-1.01□□□□□ -2.57
CMC1-202ENST00000396610 ADGRL2O95490 1459 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 QRICH2Q9H0J4 1663 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 KNL1Q8NG31 2342 aa-1.01□□□□□ -2.57
CMC1-202ENST00000396610 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP-1.02□□□□□ -2.57
CMC1-202ENST00000396610 PKHD1L1Q86WI1 4243 aa-1.02□□□□□ -2.57
CMC1-202ENST00000396610 SONP18583 2426 aaKnown RBP-1.03□□□□□ -2.57
CMC1-202ENST00000396610 VPS13DQ5THJ4 4388 aa-1.03□□□□□ -2.57
CMC1-202ENST00000396610 KIAA0556O60303 1618 aa-1.03□□□□□ -2.57
CMC1-202ENST00000396610 AKAP9Q99996 3911 aa-1.03□□□□□ -2.57
CMC1-202ENST00000396610 GNG4P50150 75 aa-1.03□□□□□ -2.57
CMC1-202ENST00000396610 PPP3R1P63098 170 aa-1.03□□□□□ -2.57
CMC1-202ENST00000396610 SHROOM2Q13796 1616 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 CORTO00230 105 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 DLEU1O43261 78 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 DEFB135Q30KP9 77 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 CRIPTQ9P021 101 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 ACACAQ13085 2346 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 AKAP13Q12802 2813 aa-1.04□□□□□ -2.58
CMC1-202ENST00000396610 MYOM2P54296 1465 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 NIPBLQ6KC79 2804 aaeCLIP-1.05□□□□□ -2.58
CMC1-202ENST00000396610 A0A1B0GU69 56 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 A0A1B0GV90 55 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 EFCAB10A6NFE3 127 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 CRYM-AS1A6NIL9 109 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 SNCAP37840 140 aa-1.05□□□□□ -2.58
CMC1-202ENST00000396610 TNRC18O15417 2968 aaPredicted RBP-1.05□□□□□ -2.58
CMC1-202ENST00000396610 H3BQ15 152 aa-1.06□□□□□ -2.58
CMC1-202ENST00000396610 LAMA2P24043 3122 aaKnown RBP-1.06□□□□□ -2.58
CMC1-202ENST00000396610 LAMA1P25391 3075 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 TEP1Q99973 2627 aaKnown RBP-1.07□□□□□ -2.58
CMC1-202ENST00000396610 S100A1P23297 94 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 KRTDAPP60985 99 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 FAT3Q8TDW7 4589 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 CUBNO60494 3623 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 TCHHQ07283 1943 aa-1.07□□□□□ -2.58
CMC1-202ENST00000396610 H1FX-AS1Q4G0G2 97 aa-1.08□□□□□ -2.58
CMC1-202ENST00000396610 CGREF1Q99674 301 aa-1.08□□□□□ -2.58
CMC1-202ENST00000396610 PLEKHH2Q8IVE3 1493 aa-1.08□□□□□ -2.58
CMC1-202ENST00000396610 DNAH9Q9NYC9 4486 aa-1.08□□□□□ -2.58
CMC1-202ENST00000396610 PKD1P98161 4303 aa-1.08□□□□□ -2.58
CMC1-202ENST00000396610 CCDC141Q6ZP82 1450 aa-1.09□□□□□ -2.58
CMC1-202ENST00000396610 A0A087WVE0 104 aa-1.09□□□□□ -2.58
CMC1-202ENST00000396610 C7orf77A4D0Y5 90 aa-1.09□□□□□ -2.58
CMC1-202ENST00000396610 I3L3M4 83 aa-1.09□□□□□ -2.58
CMC1-202ENST00000396610 VAMP8Q9BV40 100 aa-1.09□□□□□ -2.58
CMC1-202ENST00000396610 ZZEF1O43149 2961 aa-1.1□□□□□ -2.59
CMC1-202ENST00000396610 RIF1Q5UIP0 2472 aaKnown RBP-1.1□□□□□ -2.59
CMC1-202ENST00000396610 NLRP1Q9C000 1473 aa-1.1□□□□□ -2.59
CMC1-202ENST00000396610 C6orf201Q7Z4U5 140 aa-1.1□□□□□ -2.59
CMC1-202ENST00000396610 A0A0G2JMZ2 1700 aa-1.1□□□□□ -2.59
CMC1-202ENST00000396610 MRC2Q9UBG0 1479 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 TEX15Q9BXT5 2789 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 FMN2Q9NZ56 1722 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 DIP2CQ9Y2E4 1556 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 DNAH2Q9P225 4427 aa-1.11□□□□□ -2.59
CMC1-202ENST00000396610 TMEM262E9PQX1 116 aa-1.11□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 136.6 ms