RNA–Protein interactions for RNA: ENST00000395727.6

PTPN20-208, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 790 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-208ENST00000395727 LRP1Q07954 4544 aaKnown RBP3.79□□□□□ -1.8
PTPN20-208ENST00000395727 TGIF2-C20orf24A0A0A6YYL0 155 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 TRBV30A0A0K0K1B3 111 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 LINC01549A6NIU2 74 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 NDUFA1O15239 70 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 G0S2P27469 103 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 UBE2D1P51668 147 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 KIAA0087Q14695 138 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 LINC00242Q5T6M2 205 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 REG3GQ6UW15 175 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 ORAOV1Q8WV07 137 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 TMEM141Q96I45 108 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 AMELXQ99217 191 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 NXT2Q9NPJ8 142 aaKnown RBP3.78□□□□□ -1.8
PTPN20-208ENST00000395727 CYSLTR1Q9Y271 337 aa3.78□□□□□ -1.8
PTPN20-208ENST00000395727 A0A0J9YXV3 536 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 A0A1W2PNN7 141 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 GAGE2BQ13066 116 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 C9orf116Q5BN46 136 aaPredicted RBP3.77□□□□□ -1.81
PTPN20-208ENST00000395727 C2orf66Q6UXQ4 117 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 TEX43Q6ZNM6 134 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 LINC00173Q6ZV60 143 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 OPRPNQ99935 248 aaPredicted RBP3.77□□□□□ -1.81
PTPN20-208ENST00000395727 C2orf88Q9BSF0 95 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
PTPN20-208ENST00000395727 LINC01546A6NGU7 62 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 IGIPA6NJ69 53 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 KRTAP10-8P60410 259 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 SEC11AP67812 179 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 RPL18AQ02543 176 aaKnown RBP3.76□□□□□ -1.81
PTPN20-208ENST00000395727 Q6ZN92 141 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 TIMM17AQ99595 171 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 SEC11CQ9BY50 192 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 C6orf48Q9UBA6 75 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 PSORS1C2Q9UIG4 136 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 FAT3Q8TDW7 4589 aa3.76□□□□□ -1.81
PTPN20-208ENST00000395727 TMEM218A2RU14 115 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 NDUFC2-KCTD14E9PQ53 114 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 SCGB1D1O95968 90 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 ADCYAP1P18509 176 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 HERVK_113P63121 156 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 COX19Q49B96 90 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 Q8IZM0 81 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 TOMM6Q96B49 74 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 GNB1LQ9BYB4 327 aa3.75□□□□□ -1.81
PTPN20-208ENST00000395727 LOC389332A0A1B0GUA5 103 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 MT-ND6P03923 174 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 C10orf91Q5T1B1 145 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 UNQ6190/PRO20217Q6UXQ8 127 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 ERASQ7Z444 233 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 VCX2Q9H322 139 aa3.74□□□□□ -1.81
PTPN20-208ENST00000395727 PKHD1L1Q86WI1 4243 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 IGLV5-45A0A087WSX0 123 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 IGLV7-43P04211 117 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 S100PP25815 95 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 CXCL5P42830 114 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 IFITM2Q01629 132 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 RHEBQ15382 184 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 PHF5AQ7RTV0 110 aaKnown RBP3.73□□□□□ -1.81
PTPN20-208ENST00000395727 SMIM29Q86T20 159 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 KRTAP7-1Q8IUC3 87 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 DIRC1Q969H9 104 aa3.73□□□□□ -1.81
PTPN20-208ENST00000395727 PACRGQ96M98 296 aaPredicted RBP3.73□□□□□ -1.81
PTPN20-208ENST00000395727 CARHSP1Q9Y2V2 147 aaKnown RBP3.73□□□□□ -1.81
PTPN20-208ENST00000395727 TINCRA0A1B0GVN0 87 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 F8VRH5 84 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 M0QXV9 152 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 C1orf137Q5JT78 98 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 C2orf82Q6UX34 121 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 ALKBH7Q9BT30 221 aaPredicted RBP3.72□□□□□ -1.81
PTPN20-208ENST00000395727 CDKN2A-AS1Q9UH64 79 aa3.72□□□□□ -1.81
PTPN20-208ENST00000395727 FAM168BA1KXE4 195 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 SMIM1B2RUZ4 78 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 H0Y9J4 135 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 CKS1BP61024 79 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 GAGE2EQ4V326 116 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 PDZD11Q5EBL8 140 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 C6orf226Q5I0X4 101 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 C9orf129Q5T035 196 aaKnown RBP3.71□□□□□ -1.82
PTPN20-208ENST00000395727 GEMIN7Q9H840 131 aaKnown RBP3.71□□□□□ -1.82
PTPN20-208ENST00000395727 GAGE2DQ9UEU5 116 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 TP73-AS1Q9UF72 201 aa3.71□□□□□ -1.82
PTPN20-208ENST00000395727 HMCN2Q8NDA2 5059 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 IGLV1-50A0A075B6I6 118 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 NUPR1O60356 82 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 PMVKQ15126 192 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 ZC2HC1BQ5TFG8 222 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 FAM19A5Q7Z5A7 132 aaPredicted RBP3.7□□□□□ -1.82
PTPN20-208ENST00000395727 KRTAP11-1Q8IUC1 163 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 SCGB3A1Q96QR1 104 aa3.7□□□□□ -1.82
PTPN20-208ENST00000395727 KRTAP1-4P0C5Y4 121 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 KIAA1644Q3SXP7 199 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 Q75L30 129 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 COMMD7Q86VX2 200 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 CST9LQ9H4G1 147 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 TOMM7Q9P0U1 55 aa3.69□□□□□ -1.82
PTPN20-208ENST00000395727 A0A096LNJ9 63 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 IGLC3P0DOY3 106 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 MT3P25713 68 aa3.68□□□□□ -1.82
PTPN20-208ENST00000395727 RPL13AP40429 203 aaKnown RBP3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms