RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 F8VRH5 84 aa4.4□□□□□ -1.71
UBBP1-201ENST00000392399 CDK2AP2O75956 126 aa4.4□□□□□ -1.71
UBBP1-201ENST00000392399 C5orf38Q86SI9 138 aa4.4□□□□□ -1.71
UBBP1-201ENST00000392399 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
UBBP1-201ENST00000392399 GEMIN7Q9H840 131 aaKnown RBP4.4□□□□□ -1.71
UBBP1-201ENST00000392399 IGHV3-64A0A075B6Q5 118 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 DPM2O94777 84 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 COX6A2Q02221 97 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 HIGD2BQ4VC39 106 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 ZC2HC1BQ5TFG8 222 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 C2orf48Q96LS8 159 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 PKIGQ9Y2B9 76 aa4.39□□□□□ -1.71
UBBP1-201ENST00000392399 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.39□□□□□ -1.71
UBBP1-201ENST00000392399 A0A0J9YXV3 536 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 IGKCP01834 107 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 SLPIP03973 132 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 FUSP35637 526 aaKnown RBP eCLIP4.38□□□□□ -1.71
UBBP1-201ENST00000392399 KRTAP10-1P60331 282 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 SPATA45Q537H7 98 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 PMCHL2Q9BQD1 86 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 UQCR10Q9UDW1 63 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 RYR1P21817 5038 aa4.38□□□□□ -1.71
UBBP1-201ENST00000392399 HSPG2P98160 4391 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 IGLV4-69A0A075B6H9 119 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 IGLV5-45A0A087WSX0 123 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 H3BRM9 83 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 DLEU1O43261 78 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 IGLC3P0DOY3 106 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 DDTP30046 118 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 SPAG11BQ08648 103 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 SYCNQ0VAF6 134 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 RNF151Q2KHN1 245 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 SDIM1Q6ZPB5 146 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 Q6ZSA8 131 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 LINC00469Q8N7U9 141 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 ORAOV1Q8WV07 137 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 CAMK2N2Q96S95 79 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 MIEN1Q9BRT3 115 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 MRPL35Q9NZE8 188 aaKnown RBP4.37□□□□□ -1.71
UBBP1-201ENST00000392399 CDKN2A-AS1Q9UH64 79 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 PAM16Q9Y3D7 125 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 CHTOPQ9Y3Y2 248 aaKnown RBP4.37□□□□□ -1.71
UBBP1-201ENST00000392399 FAT1Q14517 4588 aa4.37□□□□□ -1.71
UBBP1-201ENST00000392399 C11orf86A6NJI1 115 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 H0Y8G0 127 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 NDUFA1O15239 70 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 PRSS2P07478 247 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 KIAA0087Q14695 138 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 C6orf226Q5I0X4 101 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 Q8IZM0 81 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 CARD19Q96LW7 228 aa4.36□□□□□ -1.71
UBBP1-201ENST00000392399 HERC2O95714 4834 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 COX8AP10176 69 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 XGP55808 180 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 HERVK_113P61574 105 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 LINC01620Q4KN68 170 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 LINC00526Q96FQ7 95 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 CHAC1Q9BUX1 264 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 LINC00474Q9P2X8 69 aa4.35□□□□□ -1.71
UBBP1-201ENST00000392399 TRBV30A0A0K0K1B3 111 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 SMIM1B2RUZ4 78 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 E9PLD3 99 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 CXCL5P42830 114 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 CKS1BP61024 79 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 CIRBPQ14011 172 aaKnown RBP4.34□□□□□ -1.71
UBBP1-201ENST00000392399 ANKRD39Q53RE8 183 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 SLC25A34Q6PIV7 304 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 Q6ZRU5 148 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 BOD1L2Q8IYS8 172 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 PRO1933Q9H354 126 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 FAM30AQ9NZY2 134 aa4.34□□□□□ -1.71
UBBP1-201ENST00000392399 LOC107984640A0A0U1RRK4 108 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 TLX1NBP0CAT3 122 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 ZNF22P17026 224 aaPredicted RBP4.33□□□□□ -1.72
UBBP1-201ENST00000392399 MAJINQ3KP22 176 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 TMEM170BQ5T4T1 132 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 SFTA2Q6UW10 78 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 UNQ6190/PRO20217Q6UXQ8 127 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 COX7B2Q8TF08 81 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 DPH3Q96FX2 82 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 TOMM7Q9P0U1 55 aa4.33□□□□□ -1.72
UBBP1-201ENST00000392399 IGLV5-39A0A0G2JS06 123 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 TMEM223A0PJW6 202 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 PCP4L1A6NKN8 68 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 LINC00587B1AMM8 73 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 SPINK8P0C7L1 97 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 HNRNPA3P51991 378 aaKnown RBP4.32□□□□□ -1.72
UBBP1-201ENST00000392399 LBHQ53QV2 105 aaPredicted RBP4.32□□□□□ -1.72
UBBP1-201ENST00000392399 STPG4Q8N801 248 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 CIRBP-AS1Q8TBR5 109 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 PLEKHB2Q96CS7 222 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 HIGD1BQ9P298 99 aa4.32□□□□□ -1.72
UBBP1-201ENST00000392399 NDUFC2-KCTD14E9PQ53 114 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 LEPROTO15243 131 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 PTTG1IPP53801 180 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 C10orf25Q5T742 122 aa4.31□□□□□ -1.72
UBBP1-201ENST00000392399 C2orf82Q6UX34 121 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms