RNA–Protein interactions for RNA: ENST00000391970.3

PTPRC-205, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 1 (best)

Gene PTPRC, Length 408 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-205ENST00000391970 SCGB3A1Q96QR1 104 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 HIGD2AQ9BW72 106 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 TMEM14BQ9NUH8 114 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 CACNA1BQ00975 2339 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 EPG5Q9HCE0 2579 aa1.44□□□□□ -2.18
PTPRC-205ENST00000391970 ANKRD11Q6UB99 2663 aaPredicted RBP1.43□□□□□ -2.18
PTPRC-205ENST00000391970 JMJD1CQ15652 2540 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 HECTD1Q9ULT8 2610 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 MYO7AQ13402 2215 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 MYO18BQ8IUG5 2567 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 LOC110117498A0A087WWA1 95 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 IGHV1-18A0A0C4DH31 117 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 C5orf67F2Z3F1 127 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 JMJD7-PLA2G4BH0Y9G9 81 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 I3L3M4 83 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 LECT2O14960 151 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 SAA2P0DJI9 122 aaPredicted RBP1.43□□□□□ -2.18
PTPRC-205ENST00000391970 S100A4P26447 101 aaKnown RBP1.43□□□□□ -2.18
PTPRC-205ENST00000391970 EDDM3BP56851 147 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 FXYD4P59646 89 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 CNBPP62633 177 aaKnown RBP1.43□□□□□ -2.18
PTPRC-205ENST00000391970 LYZL1Q6UWQ5 148 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 MIR17HGQ75NE6 70 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 SCXQ7RTU7 201 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 SMIM2Q9BVW6 85 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 NDUFA12Q9UI09 145 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 DSCAMO60469 2012 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 COL6A5A8TX70 2615 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 ZNF407Q9C0G0 2248 aa1.43□□□□□ -2.18
PTPRC-205ENST00000391970 MYO9BQ13459 2157 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 ABCA12Q86UK0 2595 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 IGKV1-12A0A0C4DH73 117 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 A0A1W2PNM2 257 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 C10orf142B7Z368 130 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 IGKV1D-12P01611 117 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 IGLV1-51P01701 117 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 C9orf116Q5BN46 136 aaPredicted RBP1.42□□□□□ -2.18
PTPRC-205ENST00000391970 C10orf128Q5T292 105 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 SOSTDC1Q6X4U4 206 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 MRPL36Q9P0J6 103 aaKnown RBP1.42□□□□□ -2.18
PTPRC-205ENST00000391970 SNRNP200O75643 2136 aaKnown RBP1.42□□□□□ -2.18
PTPRC-205ENST00000391970 ITPR3Q14573 2671 aa1.42□□□□□ -2.18
PTPRC-205ENST00000391970 HIVEP2P31629 2446 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 A0A087WSZ3 146 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 TRBV6-5A0A0K0K1A5 114 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 HCG22E2RYF7 251 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 NDUFB1O75438 58 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 CCL5P13501 91 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 PDE6GP18545 87 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 CD24P25063 80 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 RPS27P42677 84 aaKnown RBP1.41□□□□□ -2.18
PTPRC-205ENST00000391970 ZNF137PP52743 207 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 PRCDQ00LT1 54 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 NREPQ16612 68 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 KRTAP6-3Q3LI67 103 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 FAM74A4Q5TZK3 123 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 C10orf113Q5VZT2 155 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 KRTAP13-1Q8IUC0 172 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 MUSTN1Q8IVN3 82 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 ZNF625Q96I27 306 aaPredicted RBP1.41□□□□□ -2.18
PTPRC-205ENST00000391970 NOTCH1P46531 2555 aa1.41□□□□□ -2.18
PTPRC-205ENST00000391970 TRAV23DV6A0A075B6W5 121 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 H0YGX0 51 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 M0R1W7 72 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 BAALC-AS2P0C853 105 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 IGHV3-30-3P0DP02 117 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 CRIP1P50238 77 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 PIGYQ3MUY2 71 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 SFTA2Q6UW10 78 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 CASC2Q6XLA1 102 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 Q8N814 137 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 UBL5Q9BZL1 73 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 BDP1A6H8Y1 2624 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 MUC2Q02817 5179 aa1.4□□□□□ -2.19
PTPRC-205ENST00000391970 GOLGB1Q14789 3259 aaKnown RBP1.39□□□□□ -2.19
PTPRC-205ENST00000391970 USF3Q68DE3 2245 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 IGKV3D-7A0A0C4DH55 119 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 H3BPC8 53 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 NDUFA1O15239 70 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 NDUFA3O95167 84 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 CLPSP04118 112 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 FXYD7P58549 80 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 ROMO1P60602 79 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 BSPH1Q075Z2 132 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 Q6ZQT0 140 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 ZFAND2AQ8N6M9 145 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 Q8NDZ9 215 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 RETNLBQ9BQ08 111 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 KCNQ1DNQ9H478 68 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 NDUFA4L2Q9NRX3 87 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 KLK9Q9UKQ9 250 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 LENEPQ9Y5L5 61 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 SNURFQ9Y675 71 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 LINC01558Q9Y6Z2 57 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 ARFGEF3Q5TH69 2177 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 INTS1Q8N201 2190 aaKnown RBP1.39□□□□□ -2.19
PTPRC-205ENST00000391970 FASNP49327 2511 aaKnown RBP1.39□□□□□ -2.19
PTPRC-205ENST00000391970 PLXNB1O43157 2135 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 SPTBP11277 2137 aa1.39□□□□□ -2.19
PTPRC-205ENST00000391970 MYO7BQ6PIF6 2116 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms