RNA–Protein interactions for RNA: ENST00000378518.5

RER1-204, Transcript of retention in endoplasmic reticulum sorting receptor 1, humanhuman

TSL 3 BASIC

Gene RER1, Length 522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RER1-204ENST00000378518 LINC00474Q9P2X8 69 aa12.8□□□□□ -0.36
RER1-204ENST00000378518 TRBV30A0A0K0K1B3 111 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 C11orf86A6NJI1 115 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 H0Y8G0 127 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 CHTF8P0CG12 524 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 CXCL5P42830 114 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 TMEM170BQ5T4T1 132 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 SPACA4Q8TDM5 124 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 COX7B2Q8TF08 81 aa12.79□□□□□ -0.36
RER1-204ENST00000378518 A0A096LNI7 61 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 RPL18AQ02543 176 aaKnown RBP12.78□□□□□ -0.36
RER1-204ENST00000378518 MAJINQ3KP22 176 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 C10orf25Q5T742 122 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 C2orf82Q6UX34 121 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 C6orf48Q9UBA6 75 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 HERC2O95714 4834 aa12.78□□□□□ -0.36
RER1-204ENST00000378518 HSPG2P98160 4391 aa12.77□□□□□ -0.37
RER1-204ENST00000378518 PANO1I0J062 215 aa12.77□□□□□ -0.37
RER1-204ENST00000378518 SMR3BP02814 79 aaPredicted RBP12.77□□□□□ -0.37
RER1-204ENST00000378518 GAGE2BQ13066 116 aa12.76□□□□□ -0.37
RER1-204ENST00000378518 MAP1LC3CQ9BXW4 147 aa12.76□□□□□ -0.37
RER1-204ENST00000378518 PTTG1IPP53801 180 aa12.75□□□□□ -0.37
RER1-204ENST00000378518 COA6Q5JTJ3 125 aaKnown RBP12.75□□□□□ -0.37
RER1-204ENST00000378518 FAM229AH3BQW9 127 aa12.74□□□□□ -0.37
RER1-204ENST00000378518 ODF1Q14990 250 aa12.74□□□□□ -0.37
RER1-204ENST00000378518 A0A087WYN8 130 aa12.73□□□□□ -0.37
RER1-204ENST00000378518 EPM2AB3EWF7 344 aa12.73□□□□□ -0.37
RER1-204ENST00000378518 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
RER1-204ENST00000378518 IGLV5-39A0A0G2JS06 123 aa12.72□□□□□ -0.37
RER1-204ENST00000378518 LINC00528Q8N1L1 170 aa12.72□□□□□ -0.37
RER1-204ENST00000378518 STPG4Q8N801 248 aa12.72□□□□□ -0.37
RER1-204ENST00000378518 PLNP26678 52 aa12.71□□□□□ -0.37
RER1-204ENST00000378518 Q5VSD8 79 aa12.71□□□□□ -0.37
RER1-204ENST00000378518 NDUFC2-KCTD14E9PQ53 114 aa12.7□□□□□ -0.38
RER1-204ENST00000378518 PLAC8Q9NZF1 115 aa12.7□□□□□ -0.38
RER1-204ENST00000378518 TMEM223A0PJW6 202 aa12.69□□□□□ -0.38
RER1-204ENST00000378518 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
RER1-204ENST00000378518 DPM2O94777 84 aa12.68□□□□□ -0.38
RER1-204ENST00000378518 GAGE2EQ4V326 116 aa12.68□□□□□ -0.38
RER1-204ENST00000378518 SFTA2Q6UW10 78 aa12.68□□□□□ -0.38
RER1-204ENST00000378518 Q6ZRP5 223 aa12.68□□□□□ -0.38
RER1-204ENST00000378518 GAGE2DQ9UEU5 116 aa12.68□□□□□ -0.38
RER1-204ENST00000378518 PLA2G1BP04054 148 aaKnown RBP12.67□□□□□ -0.38
RER1-204ENST00000378518 KRTAP17-1Q9BYP8 105 aa12.67□□□□□ -0.38
RER1-204ENST00000378518 SYS1-DBNDD2H3BUS1 97 aa12.66□□□□□ -0.38
RER1-204ENST00000378518 IGKCP01834 107 aa12.66□□□□□ -0.38
RER1-204ENST00000378518 S100A6P06703 90 aa12.64□□□□□ -0.39
RER1-204ENST00000378518 HERVK_113P61574 105 aa12.64□□□□□ -0.39
RER1-204ENST00000378518 C7orf33Q8WU49 177 aa12.64□□□□□ -0.39
RER1-204ENST00000378518 PMCHL2Q9BQD1 86 aa12.64□□□□□ -0.39
RER1-204ENST00000378518 PET117Q6UWS5 81 aa12.63□□□□□ -0.39
RER1-204ENST00000378518 KRTAP4-5Q9BYR2 181 aa12.62□□□□□ -0.39
RER1-204ENST00000378518 C3orf79P0CE67 100 aa12.6□□□□□ -0.39
RER1-204ENST00000378518 S100A2P29034 98 aa12.6□□□□□ -0.39
RER1-204ENST00000378518 KRTDAPP60985 99 aa12.6□□□□□ -0.39
RER1-204ENST00000378518 RPL37AP61513 92 aaKnown RBP12.6□□□□□ -0.39
RER1-204ENST00000378518 LINC01545Q5VT33 79 aa12.6□□□□□ -0.39
RER1-204ENST00000378518 A0A1W2PNN7 141 aa12.59□□□□□ -0.39
RER1-204ENST00000378518 PLEKHB2Q96CS7 222 aa12.59□□□□□ -0.39
RER1-204ENST00000378518 C20orf202A1L168 122 aa12.58□□□□□ -0.4
RER1-204ENST00000378518 LEPROTO15243 131 aa12.58□□□□□ -0.4
RER1-204ENST00000378518 ZNF625Q96I27 306 aaPredicted RBP12.58□□□□□ -0.4
RER1-204ENST00000378518 ERG28Q9UKR5 140 aa12.58□□□□□ -0.4
RER1-204ENST00000378518 PFN2P35080 140 aa12.57□□□□□ -0.4
RER1-204ENST00000378518 COX17Q14061 63 aa12.57□□□□□ -0.4
RER1-204ENST00000378518 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
RER1-204ENST00000378518 FAM19A5Q7Z5A7 132 aaPredicted RBP12.57□□□□□ -0.4
RER1-204ENST00000378518 FAM168BA1KXE4 195 aa12.56□□□□□ -0.4
RER1-204ENST00000378518 HIST3H2BBQ8N257 126 aa12.56□□□□□ -0.4
RER1-204ENST00000378518 XAGE1AQ9HD64 81 aa12.56□□□□□ -0.4
RER1-204ENST00000378518 HERV-K104P63124 156 aa12.55□□□□□ -0.4
RER1-204ENST00000378518 NDUFA12Q9UI09 145 aa12.55□□□□□ -0.4
RER1-204ENST00000378518 MYMXA0A1B0GTQ4 84 aa12.54□□□□□ -0.4
RER1-204ENST00000378518 FAT1Q14517 4588 aa12.53□□□□□ -0.4
RER1-204ENST00000378518 J3QQQ9 107 aa12.53□□□□□ -0.4
RER1-204ENST00000378518 INAFM2P0DMQ5 153 aa12.53□□□□□ -0.4
RER1-204ENST00000378518 LGALS3P17931 250 aaKnown RBP12.53□□□□□ -0.4
RER1-204ENST00000378518 AKR1D1P51857 326 aa12.53□□□□□ -0.4
RER1-204ENST00000378518 LINC00587B1AMM8 73 aa12.52□□□□□ -0.41
RER1-204ENST00000378518 M0QXV9 152 aa12.52□□□□□ -0.41
RER1-204ENST00000378518 NMUP48645 174 aa12.52□□□□□ -0.41
RER1-204ENST00000378518 MEIG1Q5JSS6 88 aa12.52□□□□□ -0.41
RER1-204ENST00000378518 PHF5AQ7RTV0 110 aaKnown RBP12.52□□□□□ -0.41
RER1-204ENST00000378518 VPS13BQ7Z7G8 4022 aa12.52□□□□□ -0.41
RER1-204ENST00000378518 E9PLD3 99 aa12.51□□□□□ -0.41
RER1-204ENST00000378518 LINC00158P58513 81 aa12.51□□□□□ -0.41
RER1-204ENST00000378518 HIST1H2BLQ99880 126 aa12.51□□□□□ -0.41
RER1-204ENST00000378518 TSPEAR-AS2P59090 65 aa12.5□□□□□ -0.41
RER1-204ENST00000378518 SNRPEP62304 92 aaKnown RBP12.5□□□□□ -0.41
RER1-204ENST00000378518 KRTAP10-4P60372 401 aaPredicted RBP12.49□□□□□ -0.41
RER1-204ENST00000378518 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
RER1-204ENST00000378518 A0A0U1RRA0 63 aa12.47□□□□□ -0.41
RER1-204ENST00000378518 UBE2BP63146 152 aa12.47□□□□□ -0.41
RER1-204ENST00000378518 PRR3P79522 188 aaKnown RBP12.47□□□□□ -0.41
RER1-204ENST00000378518 SERTAD4-AS1Q5TG53 156 aa12.47□□□□□ -0.41
RER1-204ENST00000378518 KRTAP7-1Q8IUC3 87 aa12.47□□□□□ -0.41
RER1-204ENST00000378518 SND1-IT1Q9HBX3 110 aa12.47□□□□□ -0.41
RER1-204ENST00000378518 SMIM13P0DJ93 91 aa12.46□□□□□ -0.41
RER1-204ENST00000378518 LBHQ53QV2 105 aaPredicted RBP12.46□□□□□ -0.41
RER1-204ENST00000378518 C22orf24Q9Y442 160 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms